RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 CAMK2N1Q7Z7J9 78 aa5.04□□□□□ -1.6
SCFD1-220ENST00000556486 HIST3H2BBQ8N257 126 aa5.04□□□□□ -1.6
SCFD1-220ENST00000556486 HIST1H2BLQ99880 126 aa5.04□□□□□ -1.6
SCFD1-220ENST00000556486 TRBV20-1A0A075B6N2 111 aa5.03□□□□□ -1.6
SCFD1-220ENST00000556486 C5orf47Q569G3 176 aa5.02□□□□□ -1.61
SCFD1-220ENST00000556486 C12orf57Q99622 126 aa5.02□□□□□ -1.61
SCFD1-220ENST00000556486 H0YGX0 51 aa5.01□□□□□ -1.61
SCFD1-220ENST00000556486 A0A087WSZ3 146 aa5□□□□□ -1.61
SCFD1-220ENST00000556486 DLEU1O43261 78 aa5□□□□□ -1.61
SCFD1-220ENST00000556486 SNCGO76070 127 aa5□□□□□ -1.61
SCFD1-220ENST00000556486 A0A1B0GX51 115 aa4.99□□□□□ -1.61
SCFD1-220ENST00000556486 COX8AP10176 69 aa4.99□□□□□ -1.61
SCFD1-220ENST00000556486 S100A2P29034 98 aa4.99□□□□□ -1.61
SCFD1-220ENST00000556486 KRTAP6-3Q3LI67 103 aa4.99□□□□□ -1.61
SCFD1-220ENST00000556486 SMIM26A0A096LP01 95 aa4.98□□□□□ -1.61
SCFD1-220ENST00000556486 A0A0B4J2C4 111 aa4.98□□□□□ -1.61
SCFD1-220ENST00000556486 FAM240AA0A1B0GVK7 77 aa4.98□□□□□ -1.61
SCFD1-220ENST00000556486 KRTAP19-6Q3LI70 58 aa4.98□□□□□ -1.61
SCFD1-220ENST00000556486 H3BMG7 143 aa4.97□□□□□ -1.61
SCFD1-220ENST00000556486 A0A1W2PNM2 257 aa4.96□□□□□ -1.62
SCFD1-220ENST00000556486 DSCR10P59022 87 aa4.96□□□□□ -1.62
SCFD1-220ENST00000556486 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
SCFD1-220ENST00000556486 HIGD1BQ9P298 99 aa4.96□□□□□ -1.62
SCFD1-220ENST00000556486 FAM236DA0A1B0GTK5 79 aa4.95□□□□□ -1.62
SCFD1-220ENST00000556486 FAM236CP0DP71 79 aa4.95□□□□□ -1.62
SCFD1-220ENST00000556486 HRES1P13985 223 aa4.95□□□□□ -1.62
SCFD1-220ENST00000556486 LINC00313P59037 77 aa4.95□□□□□ -1.62
SCFD1-220ENST00000556486 RAB37Q96AX2 223 aa4.95□□□□□ -1.62
SCFD1-220ENST00000556486 LINC00846Q9NV44 126 aa4.95□□□□□ -1.62
SCFD1-220ENST00000556486 TRBV7-4A0A0J9YYF1 115 aa4.94□□□□□ -1.62
SCFD1-220ENST00000556486 SIGMAR1Q99720 223 aa4.94□□□□□ -1.62
SCFD1-220ENST00000556486 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
SCFD1-220ENST00000556486 S100A6P06703 90 aa4.92□□□□□ -1.62
SCFD1-220ENST00000556486 LINC00472Q9H8W2 130 aa4.92□□□□□ -1.62
SCFD1-220ENST00000556486 H3BQ85 93 aa4.91□□□□□ -1.62
SCFD1-220ENST00000556486 IGKV4-1P06312 121 aa4.91□□□□□ -1.62
SCFD1-220ENST00000556486 FABP2P12104 132 aa4.91□□□□□ -1.62
SCFD1-220ENST00000556486 C2orf91Q6ZV80 131 aa4.91□□□□□ -1.62
SCFD1-220ENST00000556486 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
SCFD1-220ENST00000556486 PSPHP1O15172 72 aa4.89□□□□□ -1.63
SCFD1-220ENST00000556486 ANKRD29Q8N6D5 301 aa4.89□□□□□ -1.63
SCFD1-220ENST00000556486 C14orf144Q96I85 54 aa4.89□□□□□ -1.63
SCFD1-220ENST00000556486 ORMDL1Q9P0S3 153 aa4.87□□□□□ -1.63
SCFD1-220ENST00000556486 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
SCFD1-220ENST00000556486 TMEM256-PLSCR3K7ERE1 68 aa4.86□□□□□ -1.63
SCFD1-220ENST00000556486 DNAL4O96015 105 aa4.86□□□□□ -1.63
SCFD1-220ENST00000556486 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
SCFD1-220ENST00000556486 SPATA45Q537H7 98 aa4.86□□□□□ -1.63
SCFD1-220ENST00000556486 C8orf87E5RJ46 101 aa4.85□□□□□ -1.63
SCFD1-220ENST00000556486 NDUFS5O43920 106 aa4.85□□□□□ -1.63
SCFD1-220ENST00000556486 TRACP01848 142 aa4.85□□□□□ -1.63
SCFD1-220ENST00000556486 CCKP06307 115 aa4.85□□□□□ -1.63
SCFD1-220ENST00000556486 FXYD2P54710 66 aa4.85□□□□□ -1.63
SCFD1-220ENST00000556486 IGHV6-1A0A0B4J1U7 121 aa4.84□□□□□ -1.63
SCFD1-220ENST00000556486 A0A1B0GVX0 72 aa4.84□□□□□ -1.63
SCFD1-220ENST00000556486 DEFB116Q30KQ4 102 aa4.84□□□□□ -1.63
SCFD1-220ENST00000556486 VAMP8Q9BV40 100 aa4.84□□□□□ -1.63
SCFD1-220ENST00000556486 NEBP20929 6669 aa4.84□□□□□ -1.64
SCFD1-220ENST00000556486 S100A1P23297 94 aa4.83□□□□□ -1.64
SCFD1-220ENST00000556486 PSMB2P49721 201 aa4.83□□□□□ -1.64
SCFD1-220ENST00000556486 ZCCHC13Q8WW36 166 aaKnown RBP4.82□□□□□ -1.64
SCFD1-220ENST00000556486 SPINK7P58062 85 aa4.81□□□□□ -1.64
SCFD1-220ENST00000556486 J3KT08 172 aa4.8□□□□□ -1.64
SCFD1-220ENST00000556486 COX6CP09669 75 aa4.8□□□□□ -1.64
SCFD1-220ENST00000556486 A0A1B0GV72 72 aa4.79□□□□□ -1.64
SCFD1-220ENST00000556486 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
SCFD1-220ENST00000556486 A8MWP4 228 aa4.78□□□□□ -1.64
SCFD1-220ENST00000556486 HSD52Q0P140 79 aa4.78□□□□□ -1.64
SCFD1-220ENST00000556486 RBM3P98179 157 aaKnown RBP4.77□□□□□ -1.65
SCFD1-220ENST00000556486 K7ERJ3 54 aa4.76□□□□□ -1.65
SCFD1-220ENST00000556486 Q6ZQT0 140 aa4.76□□□□□ -1.65
SCFD1-220ENST00000556486 DSCR8Q96T75 97 aa4.76□□□□□ -1.65
SCFD1-220ENST00000556486 A0A1B0GW54 56 aa4.74□□□□□ -1.65
SCFD1-220ENST00000556486 BPY2O14599 106 aa4.74□□□□□ -1.65
SCFD1-220ENST00000556486 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-220ENST00000556486 WFDC13Q8IUB5 93 aa4.74□□□□□ -1.65
SCFD1-220ENST00000556486 VPS25Q9BRG1 176 aa4.74□□□□□ -1.65
SCFD1-220ENST00000556486 NDUFB1O75438 58 aa4.73□□□□□ -1.65
SCFD1-220ENST00000556486 C8orf17Q9NRJ1 99 aa4.73□□□□□ -1.65
SCFD1-220ENST00000556486 C9JAW5 83 aa4.72□□□□□ -1.65
SCFD1-220ENST00000556486 LCE1FQ5T754 118 aa4.71□□□□□ -1.66
SCFD1-220ENST00000556486 PYY3Q5JQD4 70 aa4.7□□□□□ -1.66
SCFD1-220ENST00000556486 LOC110117498A0A087WWA1 95 aa4.69□□□□□ -1.66
SCFD1-220ENST00000556486 IGKV3D-7A0A0C4DH55 119 aa4.69□□□□□ -1.66
SCFD1-220ENST00000556486 BAALC-AS2P0C853 105 aa4.69□□□□□ -1.66
SCFD1-220ENST00000556486 SCGB1C2P0DMR2 95 aa4.68□□□□□ -1.66
SCFD1-220ENST00000556486 UQCR10Q9UDW1 63 aa4.68□□□□□ -1.66
SCFD1-220ENST00000556486 JMJD7-PLA2G4BH0Y9G9 81 aa4.67□□□□□ -1.66
SCFD1-220ENST00000556486 PDE6GP18545 87 aa4.67□□□□□ -1.66
SCFD1-220ENST00000556486 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
SCFD1-220ENST00000556486 H1FX-AS1Q4G0G2 97 aa4.66□□□□□ -1.66
SCFD1-220ENST00000556486 LYRM7Q5U5X0 104 aa4.66□□□□□ -1.66
SCFD1-220ENST00000556486 PRR15Q8IV56 129 aa4.66□□□□□ -1.66
SCFD1-220ENST00000556486 A6NN06 94 aa4.64□□□□□ -1.67
SCFD1-220ENST00000556486 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
SCFD1-220ENST00000556486 TMEM254Q8TBM7 123 aa4.64□□□□□ -1.67
SCFD1-220ENST00000556486 KMT2DO14686 5537 aa4.64□□□□□ -1.67
SCFD1-220ENST00000556486 MMP24-AS1A0A0U1RRL7 71 aa4.63□□□□□ -1.67
SCFD1-220ENST00000556486 MRPL34Q9BQ48 92 aaKnown RBP4.63□□□□□ -1.67
SCFD1-220ENST00000556486 C4orf26Q17RF5 130 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms