RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 PCOTHQ58A44 107 aa10.88□□□□□ -0.67
RCCD1-205ENST00000556333 LCE2AQ5TA79 106 aaPredicted RBP10.88□□□□□ -0.67
RCCD1-205ENST00000556333 J3KT08 172 aa10.86□□□□□ -0.67
RCCD1-205ENST00000556333 IGHV6-1A0A0B4J1U7 121 aa10.85□□□□□ -0.67
RCCD1-205ENST00000556333 LINC00313P59037 77 aa10.85□□□□□ -0.67
RCCD1-205ENST00000556333 NREPQ16612 68 aa10.85□□□□□ -0.67
RCCD1-205ENST00000556333 F8W1H4 67 aa10.82□□□□□ -0.68
RCCD1-205ENST00000556333 A0A1B0GVX0 72 aa10.8□□□□□ -0.68
RCCD1-205ENST00000556333 NDUFB1O75438 58 aa10.8□□□□□ -0.68
RCCD1-205ENST00000556333 Q75L30 129 aa10.8□□□□□ -0.68
RCCD1-205ENST00000556333 KRTAP4-1Q9BYQ7 146 aa10.8□□□□□ -0.68
RCCD1-205ENST00000556333 ATP11AUNQ6ZP68 121 aa10.78□□□□□ -0.68
RCCD1-205ENST00000556333 NOTCH2NLQ7Z3S9 236 aa10.77□□□□□ -0.69
RCCD1-205ENST00000556333 C8orf87E5RJ46 101 aa10.76□□□□□ -0.69
RCCD1-205ENST00000556333 C20orf166-AS1Q96NR2 134 aa10.75□□□□□ -0.69
RCCD1-205ENST00000556333 A8MUU9 505 aa10.73□□□□□ -0.69
RCCD1-205ENST00000556333 A8MWP4 228 aa10.73□□□□□ -0.69
RCCD1-205ENST00000556333 ETDBQ3ZM63 59 aa10.73□□□□□ -0.69
RCCD1-205ENST00000556333 KRTAP16-1A8MUX0 517 aa10.71□□□□□ -0.69
RCCD1-205ENST00000556333 IGKV3D-7A0A0C4DH55 119 aa10.69□□□□□ -0.7
RCCD1-205ENST00000556333 Q6ZVQ6 151 aa10.69□□□□□ -0.7
RCCD1-205ENST00000556333 BPY2O14599 106 aa10.68□□□□□ -0.7
RCCD1-205ENST00000556333 C8orf17Q9NRJ1 99 aa10.66□□□□□ -0.7
RCCD1-205ENST00000556333 A0A1B0GV90 55 aa10.65□□□□□ -0.7
RCCD1-205ENST00000556333 PRR15Q8IV56 129 aa10.65□□□□□ -0.7
RCCD1-205ENST00000556333 UBL5Q9BZL1 73 aa10.65□□□□□ -0.7
RCCD1-205ENST00000556333 LINC00846Q9NV44 126 aa10.65□□□□□ -0.7
RCCD1-205ENST00000556333 K7EQZ3 153 aa10.61□□□□□ -0.71
RCCD1-205ENST00000556333 MMP24-AS1A0A0U1RRL7 71 aa10.55□□□□□ -0.72
RCCD1-205ENST00000556333 Q8N9L7 120 aa10.54□□□□□ -0.72
RCCD1-205ENST00000556333 FSIP2Q5CZC0 6907 aa10.53□□□□□ -0.72
RCCD1-205ENST00000556333 hDV103S1A0JD37 113 aa10.52□□□□□ -0.73
RCCD1-205ENST00000556333 Q8N9P0 234 aaPredicted RBP10.52□□□□□ -0.73
RCCD1-205ENST00000556333 LCE2DQ5TA82 110 aaPredicted RBP10.51□□□□□ -0.73
RCCD1-205ENST00000556333 TMEM254Q8TBM7 123 aa10.51□□□□□ -0.73
RCCD1-205ENST00000556333 MRPL34Q9BQ48 92 aaKnown RBP10.51□□□□□ -0.73
RCCD1-205ENST00000556333 CRCT1Q9UGL9 99 aa10.5□□□□□ -0.73
RCCD1-205ENST00000556333 NDUFS5O43920 106 aa10.48□□□□□ -0.73
RCCD1-205ENST00000556333 WFDC13Q8IUB5 93 aa10.48□□□□□ -0.73
RCCD1-205ENST00000556333 ZCCHC13Q8WW36 166 aaKnown RBP10.48□□□□□ -0.73
RCCD1-205ENST00000556333 ACYP1P07311 99 aa10.46□□□□□ -0.73
RCCD1-205ENST00000556333 COX6B2Q6YFQ2 88 aa10.46□□□□□ -0.73
RCCD1-205ENST00000556333 CASC2Q6XLA1 102 aa10.45□□□□□ -0.74
RCCD1-205ENST00000556333 KRTAP19-2Q3LHN2 52 aa10.43□□□□□ -0.74
RCCD1-205ENST00000556333 CXCL6P80162 114 aa10.41□□□□□ -0.74
RCCD1-205ENST00000556333 FAM240AA0A1B0GVK7 77 aa10.4□□□□□ -0.74
RCCD1-205ENST00000556333 LCE2CQ5TA81 110 aa10.4□□□□□ -0.74
RCCD1-205ENST00000556333 HCG22E2RYF7 251 aa10.38□□□□□ -0.75
RCCD1-205ENST00000556333 SPINK7P58062 85 aa10.32□□□□□ -0.76
RCCD1-205ENST00000556333 FAM236DA0A1B0GTK5 79 aa10.29□□□□□ -0.76
RCCD1-205ENST00000556333 FAM236CP0DP71 79 aa10.29□□□□□ -0.76
RCCD1-205ENST00000556333 MT1HP80294 61 aa10.29□□□□□ -0.76
RCCD1-205ENST00000556333 ATP5EP2Q5VTU8 51 aa10.29□□□□□ -0.76
RCCD1-205ENST00000556333 RBM12B-AS1Q9P1G2 102 aa10.29□□□□□ -0.76
RCCD1-205ENST00000556333 HRES1P13985 223 aa10.28□□□□□ -0.76
RCCD1-205ENST00000556333 J3QR89 54 aa10.27□□□□□ -0.77
RCCD1-205ENST00000556333 M0R2T5 61 aa10.25□□□□□ -0.77
RCCD1-205ENST00000556333 HIST1H4AP62805 103 aaKnown RBP10.25□□□□□ -0.77
RCCD1-205ENST00000556333 Q5W150 140 aa10.23□□□□□ -0.77
RCCD1-205ENST00000556333 LINC00643Q86TS7 51 aa10.22□□□□□ -0.77
RCCD1-205ENST00000556333 IGKV2D-30A0A075B6S6 120 aa10.19□□□□□ -0.78
RCCD1-205ENST00000556333 IGKV2-30P06310 120 aa10.19□□□□□ -0.78
RCCD1-205ENST00000556333 MPLKIPQ8TAP9 179 aa10.19□□□□□ -0.78
RCCD1-205ENST00000556333 C7orf65Q6ZTY9 151 aa10.16□□□□□ -0.78
RCCD1-205ENST00000556333 TP53AIP1Q9HCN2 124 aa10.16□□□□□ -0.78
RCCD1-205ENST00000556333 A0A087WVE0 104 aa10.1□□□□□ -0.79
RCCD1-205ENST00000556333 FLGP20930 4061 aaPredicted RBP10.07□□□□□ -0.8
RCCD1-205ENST00000556333 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
RCCD1-205ENST00000556333 K7ERU9 68 aa10.03□□□□□ -0.8
RCCD1-205ENST00000556333 TRAV22A0A0B4J277 110 aa9.99□□□□□ -0.81
RCCD1-205ENST00000556333 LORP23490 312 aaPredicted RBP9.99□□□□□ -0.81
RCCD1-205ENST00000556333 UQCRQO14949 82 aa9.96□□□□□ -0.82
RCCD1-205ENST00000556333 C4orf26Q17RF5 130 aa9.96□□□□□ -0.82
RCCD1-205ENST00000556333 H0Y9P7 68 aa9.91□□□□□ -0.82
RCCD1-205ENST00000556333 H1FX-AS1Q4G0G2 97 aa9.91□□□□□ -0.82
RCCD1-205ENST00000556333 LOC101927531A0A1B0GV80 90 aa9.89□□□□□ -0.83
RCCD1-205ENST00000556333 ATOX1O00244 68 aa9.87□□□□□ -0.83
RCCD1-205ENST00000556333 CYP4F30PQ9H0H9 118 aa9.87□□□□□ -0.83
RCCD1-205ENST00000556333 KRTAP9-7A8MTY7 169 aa9.86□□□□□ -0.83
RCCD1-205ENST00000556333 SCGB1A1P11684 91 aa9.86□□□□□ -0.83
RCCD1-205ENST00000556333 MT-ATP8P03928 68 aa9.85□□□□□ -0.83
RCCD1-205ENST00000556333 C1orf64Q8NEQ6 169 aa9.83□□□□□ -0.84
RCCD1-205ENST00000556333 OCR1Q9BZK8 76 aa9.83□□□□□ -0.84
RCCD1-205ENST00000556333 IMUPQ9GZP8 106 aa9.82□□□□□ -0.84
RCCD1-205ENST00000556333 MP68P56378 58 aa9.79□□□□□ -0.84
RCCD1-205ENST00000556333 LINC00208Q96KT6 92 aa9.79□□□□□ -0.84
RCCD1-205ENST00000556333 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.78□□□□□ -0.84
RCCD1-205ENST00000556333 KRTAP9-8Q9BYQ0 159 aa9.77□□□□□ -0.85
RCCD1-205ENST00000556333 C5orf47Q569G3 176 aa9.75□□□□□ -0.85
RCCD1-205ENST00000556333 KRTAP3-1Q9BYR8 98 aa9.75□□□□□ -0.85
RCCD1-205ENST00000556333 FAM236AA0A1B0GUQ0 79 aa9.7□□□□□ -0.86
RCCD1-205ENST00000556333 FAM236BA0A1B0GV22 79 aa9.7□□□□□ -0.86
RCCD1-205ENST00000556333 S4R3F8 94 aa9.7□□□□□ -0.86
RCCD1-205ENST00000556333 MT2AP02795 61 aa9.69□□□□□ -0.86
RCCD1-205ENST00000556333 H3BPC8 53 aa9.66□□□□□ -0.86
RCCD1-205ENST00000556333 KRTAP10-10P60014 251 aa9.65□□□□□ -0.86
RCCD1-205ENST00000556333 KLKP1Q107X0 134 aa9.65□□□□□ -0.86
RCCD1-205ENST00000556333 MT1FP04733 61 aa9.62□□□□□ -0.87
RCCD1-205ENST00000556333 SMIM20Q8N5G0 67 aa9.62□□□□□ -0.87
RCCD1-205ENST00000556333 LCA10Q71F78 164 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms