RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 LAMTOR3Q9UHA4 124 aa2.7□□□□□ -1.98
ATXN3-238ENST00000556288 LRP1Q07954 4544 aaKnown RBP2.69□□□□□ -1.98
ATXN3-238ENST00000556288 SNCGO76070 127 aa2.69□□□□□ -1.98
ATXN3-238ENST00000556288 ELOF1P60002 83 aaKnown RBP2.69□□□□□ -1.98
ATXN3-238ENST00000556288 TRBV7-6A0A0J9YX20 115 aa2.68□□□□□ -1.98
ATXN3-238ENST00000556288 TEX49A0A1B0GTD5 131 aa2.68□□□□□ -1.98
ATXN3-238ENST00000556288 hADV29S1A0JD25 119 aa2.68□□□□□ -1.98
ATXN3-238ENST00000556288 C9JAW5 83 aa2.68□□□□□ -1.98
ATXN3-238ENST00000556288 LST1O00453 97 aa2.68□□□□□ -1.98
ATXN3-238ENST00000556288 SPAG11AQ6PDA7 123 aa2.68□□□□□ -1.98
ATXN3-238ENST00000556288 SSBP3-AS1Q7Z2R9 100 aa2.68□□□□□ -1.98
ATXN3-238ENST00000556288 IMUPQ9GZP8 106 aa2.68□□□□□ -1.98
ATXN3-238ENST00000556288 MYCBP2O75592 4640 aa2.68□□□□□ -1.98
ATXN3-238ENST00000556288 F8WEM9 126 aa2.67□□□□□ -1.98
ATXN3-238ENST00000556288 TRACP01848 142 aa2.67□□□□□ -1.98
ATXN3-238ENST00000556288 LINC00483Q53H64 154 aa2.67□□□□□ -1.98
ATXN3-238ENST00000556288 A0A0G2JQZ4 141 aa2.66□□□□□ -1.98
ATXN3-238ENST00000556288 SPINK1P00995 79 aa2.66□□□□□ -1.98
ATXN3-238ENST00000556288 LINC00575Q6W349 94 aa2.66□□□□□ -1.98
ATXN3-238ENST00000556288 TRBV7-7A0A0K0K1E9 115 aa2.65□□□□□ -1.99
ATXN3-238ENST00000556288 H0YGX0 51 aa2.65□□□□□ -1.99
ATXN3-238ENST00000556288 MT-ATP8P03928 68 aa2.65□□□□□ -1.99
ATXN3-238ENST00000556288 Q6ZQY7 126 aa2.65□□□□□ -1.99
ATXN3-238ENST00000556288 ANAPC13Q9BS18 74 aa2.65□□□□□ -1.99
ATXN3-238ENST00000556288 FAT3Q8TDW7 4589 aa2.65□□□□□ -1.99
ATXN3-238ENST00000556288 A0A1B0GX51 115 aa2.64□□□□□ -1.99
ATXN3-238ENST00000556288 LINC00643Q86TS7 51 aa2.64□□□□□ -1.99
ATXN3-238ENST00000556288 CLEC2BQ92478 149 aa2.64□□□□□ -1.99
ATXN3-238ENST00000556288 HERC1Q15751 4861 aa2.64□□□□□ -1.99
ATXN3-238ENST00000556288 H3BQ85 93 aa2.63□□□□□ -1.99
ATXN3-238ENST00000556288 DNAL4O96015 105 aa2.63□□□□□ -1.99
ATXN3-238ENST00000556288 SPRR1BP22528 89 aa2.63□□□□□ -1.99
ATXN3-238ENST00000556288 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.63□□□□□ -1.99
ATXN3-238ENST00000556288 IGLV5-48A0A075B6I7 105 aa2.62□□□□□ -1.99
ATXN3-238ENST00000556288 LIMD2Q9BT23 127 aa2.62□□□□□ -1.99
ATXN3-238ENST00000556288 C9orf92A6NGG3 77 aa2.61□□□□□ -1.99
ATXN3-238ENST00000556288 BAALC-AS2P0C853 105 aa2.61□□□□□ -1.99
ATXN3-238ENST00000556288 OBSCN-AS1Q96MR7 158 aa2.61□□□□□ -1.99
ATXN3-238ENST00000556288 UBR4Q5T4S7 5183 aa2.61□□□□□ -1.99
ATXN3-238ENST00000556288 A8MU10 97 aa2.6□□□□□ -1.99
ATXN3-238ENST00000556288 JMJD7-PLA2G4BH0Y9G9 81 aa2.6□□□□□ -1.99
ATXN3-238ENST00000556288 CD164Q04900 197 aa2.6□□□□□ -1.99
ATXN3-238ENST00000556288 Q6JHZ5 121 aa2.6□□□□□ -1.99
ATXN3-238ENST00000556288 IGFL1Q6UW32 110 aa2.6□□□□□ -1.99
ATXN3-238ENST00000556288 FP248Q71RG6 208 aaPredicted RBP2.6□□□□□ -1.99
ATXN3-238ENST00000556288 ORMDL1Q9P0S3 153 aa2.6□□□□□ -1.99
ATXN3-238ENST00000556288 TNXBP22105 4242 aa2.6□□□□□ -1.99
ATXN3-238ENST00000556288 ATOX1O00244 68 aa2.59□□□□□ -1.99
ATXN3-238ENST00000556288 UQCRQO14949 82 aa2.59□□□□□ -1.99
ATXN3-238ENST00000556288 ATP5EP2Q5VTU8 51 aa2.59□□□□□ -1.99
ATXN3-238ENST00000556288 TMEM256-PLSCR3K7ERE1 68 aa2.58□□□□□ -2
ATXN3-238ENST00000556288 RPS29P62273 56 aaKnown RBP2.58□□□□□ -2
ATXN3-238ENST00000556288 PDE6GP18545 87 aa2.57□□□□□ -2
ATXN3-238ENST00000556288 HIST1H4AP62805 103 aaKnown RBP2.57□□□□□ -2
ATXN3-238ENST00000556288 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
ATXN3-238ENST00000556288 TPRXLQ17RH7 258 aa2.57□□□□□ -2
ATXN3-238ENST00000556288 C1orf195Q5TG92 126 aa2.57□□□□□ -2
ATXN3-238ENST00000556288 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
ATXN3-238ENST00000556288 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
ATXN3-238ENST00000556288 CCDC179H3BU77 68 aa2.56□□□□□ -2
ATXN3-238ENST00000556288 CCKP06307 115 aa2.56□□□□□ -2
ATXN3-238ENST00000556288 COX7CP15954 63 aa2.56□□□□□ -2
ATXN3-238ENST00000556288 KRTAP13-3Q3SY46 172 aa2.56□□□□□ -2
ATXN3-238ENST00000556288 IGLV8-61A0A075B6I0 122 aa2.55□□□□□ -2
ATXN3-238ENST00000556288 A0A087WSZ3 146 aa2.55□□□□□ -2
ATXN3-238ENST00000556288 RBM3P98179 157 aaKnown RBP2.55□□□□□ -2
ATXN3-238ENST00000556288 DEFB116Q30KQ4 102 aa2.55□□□□□ -2
ATXN3-238ENST00000556288 SMIM20Q8N5G0 67 aa2.55□□□□□ -2
ATXN3-238ENST00000556288 DSCR8Q96T75 97 aa2.55□□□□□ -2
ATXN3-238ENST00000556288 SS18L2Q9UHA2 77 aa2.55□□□□□ -2
ATXN3-238ENST00000556288 LPAP08519 4548 aa2.54□□□□□ -2
ATXN3-238ENST00000556288 LOC110117498A0A087WWA1 95 aa2.54□□□□□ -2
ATXN3-238ENST00000556288 SERP2Q8N6R1 65 aa2.54□□□□□ -2
ATXN3-238ENST00000556288 Q96NJ1 140 aa2.54□□□□□ -2
ATXN3-238ENST00000556288 UBL5Q9BZL1 73 aa2.54□□□□□ -2
ATXN3-238ENST00000556288 A0A0U1RQV1 116 aa2.53□□□□□ -2
ATXN3-238ENST00000556288 A0A1B0GW54 56 aa2.53□□□□□ -2
ATXN3-238ENST00000556288 A0A1W2PNM2 257 aa2.53□□□□□ -2
ATXN3-238ENST00000556288 IGKV4-1P06312 121 aa2.53□□□□□ -2
ATXN3-238ENST00000556288 TMEM258P61165 79 aa2.53□□□□□ -2
ATXN3-238ENST00000556288 CXCL6P80162 114 aa2.53□□□□□ -2
ATXN3-238ENST00000556288 PCOTHQ58A44 107 aa2.53□□□□□ -2
ATXN3-238ENST00000556288 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
ATXN3-238ENST00000556288 Q5XG85 94 aa2.53□□□□□ -2
ATXN3-238ENST00000556288 J3KT08 172 aa2.52□□□□□ -2.01
ATXN3-238ENST00000556288 C14orf132Q9NPU4 83 aa2.52□□□□□ -2.01
ATXN3-238ENST00000556288 LINC00846Q9NV44 126 aa2.52□□□□□ -2.01
ATXN3-238ENST00000556288 TRBV7-4A0A0J9YYF1 115 aa2.51□□□□□ -2.01
ATXN3-238ENST00000556288 ASB16-AS1Q495Z4 193 aa2.51□□□□□ -2.01
ATXN3-238ENST00000556288 ATP11AUNQ6ZP68 121 aa2.51□□□□□ -2.01
ATXN3-238ENST00000556288 IGHV6-1A0A0B4J1U7 121 aa2.5□□□□□ -2.01
ATXN3-238ENST00000556288 NDUFC1O43677 76 aa2.5□□□□□ -2.01
ATXN3-238ENST00000556288 LINC00313P59037 77 aa2.5□□□□□ -2.01
ATXN3-238ENST00000556288 Q6ZQT0 140 aa2.5□□□□□ -2.01
ATXN3-238ENST00000556288 LRP2P98164 4655 aa2.49□□□□□ -2.01
ATXN3-238ENST00000556288 TRAV7A0A075B6U4 112 aa2.49□□□□□ -2.01
ATXN3-238ENST00000556288 ATP5EP56381 51 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-238ENST00000556288 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
ATXN3-238ENST00000556288 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
ATXN3-238ENST00000556288 NDUFB1O75438 58 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 349 ms