RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 A0A1B0GVX0 72 aa5.89□□□□□ -1.47
EFCAB11-209ENST00000556005 KMT2CQ8NEZ4 4911 aaKnown RBP5.89□□□□□ -1.47
EFCAB11-209ENST00000556005 IGHV6-1A0A0B4J1U7 121 aa5.88□□□□□ -1.47
EFCAB11-209ENST00000556005 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
EFCAB11-209ENST00000556005 Q5XG85 94 aa5.88□□□□□ -1.47
EFCAB11-209ENST00000556005 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
EFCAB11-209ENST00000556005 TYMSOSQ8TAI1 123 aa5.86□□□□□ -1.47
EFCAB11-209ENST00000556005 MP68P56378 58 aa5.85□□□□□ -1.47
EFCAB11-209ENST00000556005 LIMD2Q9BT23 127 aa5.85□□□□□ -1.47
EFCAB11-209ENST00000556005 FAM236DA0A1B0GTK5 79 aa5.83□□□□□ -1.48
EFCAB11-209ENST00000556005 FAM236CP0DP71 79 aa5.83□□□□□ -1.48
EFCAB11-209ENST00000556005 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
EFCAB11-209ENST00000556005 APOBP04114 4563 aaKnown RBP5.83□□□□□ -1.48
EFCAB11-209ENST00000556005 SPINK1P00995 79 aa5.82□□□□□ -1.48
EFCAB11-209ENST00000556005 RPS28P62857 69 aaKnown RBP5.82□□□□□ -1.48
EFCAB11-209ENST00000556005 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
EFCAB11-209ENST00000556005 H3BPC8 53 aa5.81□□□□□ -1.48
EFCAB11-209ENST00000556005 C1orf195Q5TG92 126 aa5.81□□□□□ -1.48
EFCAB11-209ENST00000556005 ZCCHC13Q8WW36 166 aaKnown RBP5.81□□□□□ -1.48
EFCAB11-209ENST00000556005 C8orf87E5RJ46 101 aa5.81□□□□□ -1.48
EFCAB11-209ENST00000556005 H0Y9P7 68 aa5.81□□□□□ -1.48
EFCAB11-209ENST00000556005 ATP5EP56381 51 aaPredicted RBP5.81□□□□□ -1.48
EFCAB11-209ENST00000556005 KRTAP10-4P60372 401 aaPredicted RBP5.8□□□□□ -1.48
EFCAB11-209ENST00000556005 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
EFCAB11-209ENST00000556005 PRR26Q8N8Z3 221 aa5.8□□□□□ -1.48
EFCAB11-209ENST00000556005 NDUFS5O43920 106 aa5.79□□□□□ -1.48
EFCAB11-209ENST00000556005 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
EFCAB11-209ENST00000556005 LINC00208Q96KT6 92 aa5.79□□□□□ -1.48
EFCAB11-209ENST00000556005 TRAV22A0A0B4J277 110 aa5.79□□□□□ -1.48
EFCAB11-209ENST00000556005 FAT1Q14517 4588 aa5.79□□□□□ -1.48
EFCAB11-209ENST00000556005 RPS29P62273 56 aaKnown RBP5.78□□□□□ -1.48
EFCAB11-209ENST00000556005 LINC00304Q8N9R0 145 aa5.78□□□□□ -1.48
EFCAB11-209ENST00000556005 LINC00313P59037 77 aa5.77□□□□□ -1.49
EFCAB11-209ENST00000556005 FAM229AH3BQW9 127 aa5.77□□□□□ -1.49
EFCAB11-209ENST00000556005 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
EFCAB11-209ENST00000556005 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
EFCAB11-209ENST00000556005 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
EFCAB11-209ENST00000556005 KRTAP4-6Q9BYQ5 205 aa5.74□□□□□ -1.49
EFCAB11-209ENST00000556005 RYR3Q15413 4870 aa5.73□□□□□ -1.49
EFCAB11-209ENST00000556005 KRTAP17-1Q9BYP8 105 aa5.71□□□□□ -1.5
EFCAB11-209ENST00000556005 Q8N9P0 234 aaPredicted RBP5.7□□□□□ -1.5
EFCAB11-209ENST00000556005 OXTP01178 125 aa5.69□□□□□ -1.5
EFCAB11-209ENST00000556005 Q5VSD8 79 aa5.68□□□□□ -1.5
EFCAB11-209ENST00000556005 SPANXA2-OT1Q8N9U9 137 aa5.68□□□□□ -1.5
EFCAB11-209ENST00000556005 CYP4F30PQ9H0H9 118 aa5.68□□□□□ -1.5
EFCAB11-209ENST00000556005 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
EFCAB11-209ENST00000556005 Q5W150 140 aa5.67□□□□□ -1.5
EFCAB11-209ENST00000556005 LOC101927531A0A1B0GV80 90 aa5.66□□□□□ -1.5
EFCAB11-209ENST00000556005 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
EFCAB11-209ENST00000556005 PRR4Q16378 134 aa5.65□□□□□ -1.5
EFCAB11-209ENST00000556005 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.5
EFCAB11-209ENST00000556005 HSPG2P98160 4391 aa5.65□□□□□ -1.5
EFCAB11-209ENST00000556005 PCOTHQ58A44 107 aa5.64□□□□□ -1.51
EFCAB11-209ENST00000556005 IGLV7-46A0A075B6I9 117 aa5.64□□□□□ -1.51
EFCAB11-209ENST00000556005 SMIM26A0A096LP01 95 aa5.63□□□□□ -1.51
EFCAB11-209ENST00000556005 RYR1P21817 5038 aa5.62□□□□□ -1.51
EFCAB11-209ENST00000556005 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
EFCAB11-209ENST00000556005 RETNLBQ9BQ08 111 aa5.6□□□□□ -1.51
EFCAB11-209ENST00000556005 Q8N1X5 172 aa5.59□□□□□ -1.51
EFCAB11-209ENST00000556005 IGKV2-30P06310 120 aa5.57□□□□□ -1.52
EFCAB11-209ENST00000556005 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
EFCAB11-209ENST00000556005 C9orf92A6NGG3 77 aa5.56□□□□□ -1.52
EFCAB11-209ENST00000556005 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
EFCAB11-209ENST00000556005 TNXBP22105 4242 aa5.55□□□□□ -1.52
EFCAB11-209ENST00000556005 KIAA1109Q2LD37 5005 aa5.55□□□□□ -1.52
EFCAB11-209ENST00000556005 C20orf166-AS1Q96NR2 134 aa5.54□□□□□ -1.52
EFCAB11-209ENST00000556005 FLG2Q5D862 2391 aaPredicted RBP5.53□□□□□ -1.52
EFCAB11-209ENST00000556005 A8MUU9 505 aa5.52□□□□□ -1.53
EFCAB11-209ENST00000556005 HRES1P13985 223 aa5.52□□□□□ -1.53
EFCAB11-209ENST00000556005 C4orf26Q17RF5 130 aa5.52□□□□□ -1.53
EFCAB11-209ENST00000556005 EPPK1P58107 5090 aaKnown RBP5.52□□□□□ -1.53
EFCAB11-209ENST00000556005 IGKV2D-30A0A075B6S6 120 aa5.51□□□□□ -1.53
EFCAB11-209ENST00000556005 COA5Q86WW8 74 aa5.51□□□□□ -1.53
EFCAB11-209ENST00000556005 MPLKIPQ8TAP9 179 aa5.51□□□□□ -1.53
EFCAB11-209ENST00000556005 FAT3Q8TDW7 4589 aa5.51□□□□□ -1.53
EFCAB11-209ENST00000556005 ACYP2P14621 99 aa5.49□□□□□ -1.53
EFCAB11-209ENST00000556005 C7orf65Q6ZTY9 151 aa5.49□□□□□ -1.53
EFCAB11-209ENST00000556005 Q1T7F1 81 aa5.48□□□□□ -1.53
EFCAB11-209ENST00000556005 XP32Q5T750 250 aa5.47□□□□□ -1.53
EFCAB11-209ENST00000556005 Q75L30 129 aa5.47□□□□□ -1.53
EFCAB11-209ENST00000556005 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
EFCAB11-209ENST00000556005 V9GYY9 64 aa5.47□□□□□ -1.53
EFCAB11-209ENST00000556005 MT1HL1P0DM35 61 aa5.46□□□□□ -1.54
EFCAB11-209ENST00000556005 DMBT1Q9UGM3 2413 aaPredicted RBP5.43□□□□□ -1.54
EFCAB11-209ENST00000556005 MYCBP2O75592 4640 aa5.43□□□□□ -1.54
EFCAB11-209ENST00000556005 CHKB-CPT1BH3BT56 60 aa5.41□□□□□ -1.54
EFCAB11-209ENST00000556005 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
EFCAB11-209ENST00000556005 SPINK7P58062 85 aa5.39□□□□□ -1.55
EFCAB11-209ENST00000556005 A8MUN3 132 aa5.38□□□□□ -1.55
EFCAB11-209ENST00000556005 PSPHP1O15172 72 aa5.37□□□□□ -1.55
EFCAB11-209ENST00000556005 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
EFCAB11-209ENST00000556005 KRTAP4-5Q9BYR2 181 aa5.37□□□□□ -1.55
EFCAB11-209ENST00000556005 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
EFCAB11-209ENST00000556005 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
EFCAB11-209ENST00000556005 TPRXLQ17RH7 258 aa5.31□□□□□ -1.56
EFCAB11-209ENST00000556005 Q5VV11 94 aa5.31□□□□□ -1.56
EFCAB11-209ENST00000556005 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
EFCAB11-209ENST00000556005 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
EFCAB11-209ENST00000556005 BIRC6Q9NR09 4857 aa5.29□□□□□ -1.56
EFCAB11-209ENST00000556005 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms