RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
CHD8-209ENST00000555935 KRTAP21-3Q3LHN1 58 aa4.56□□□□□ -1.68
CHD8-209ENST00000555935 KRTAP24-1Q3LI83 254 aa4.56□□□□□ -1.68
CHD8-209ENST00000555935 IGLV5-52A0A0A0MRZ9 124 aa4.56□□□□□ -1.68
CHD8-209ENST00000555935 ZNF861PO60384 105 aa4.56□□□□□ -1.68
CHD8-209ENST00000555935 SPINK6Q6UWN8 80 aa4.56□□□□□ -1.68
CHD8-209ENST00000555935 MAST4O15021 2626 aa4.55□□□□□ -1.68
CHD8-209ENST00000555935 C4orf48Q5BLP8 95 aa4.55□□□□□ -1.68
CHD8-209ENST00000555935 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
CHD8-209ENST00000555935 DNAH10Q8IVF4 4471 aa4.55□□□□□ -1.68
CHD8-209ENST00000555935 DNAH3Q8TD57 4116 aa4.55□□□□□ -1.68
CHD8-209ENST00000555935 NBDYA0A0U1RRE5 68 aa4.55□□□□□ -1.68
CHD8-209ENST00000555935 PSORS1C2Q9UIG4 136 aa4.55□□□□□ -1.68
CHD8-209ENST00000555935 Q6ZRN7 208 aaPredicted RBP4.54□□□□□ -1.68
CHD8-209ENST00000555935 IGKV2-30P06310 120 aa4.53□□□□□ -1.68
CHD8-209ENST00000555935 ALMS1Q8TCU4 4167 aa4.53□□□□□ -1.68
CHD8-209ENST00000555935 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.68
CHD8-209ENST00000555935 HUWE1Q7Z6Z7 4374 aaKnown RBP4.51□□□□□ -1.69
CHD8-209ENST00000555935 RETNLBQ9BQ08 111 aa4.51□□□□□ -1.69
CHD8-209ENST00000555935 SSBP3-AS1Q7Z2R9 100 aa4.5□□□□□ -1.69
CHD8-209ENST00000555935 CIRBP-AS1Q8TBR5 109 aa4.5□□□□□ -1.69
CHD8-209ENST00000555935 CMYA5Q8N3K9 4069 aa4.5□□□□□ -1.69
CHD8-209ENST00000555935 DNAH9Q9NYC9 4486 aa4.49□□□□□ -1.69
CHD8-209ENST00000555935 HECTD1Q9ULT8 2610 aa4.49□□□□□ -1.69
CHD8-209ENST00000555935 LYSTQ99698 3801 aa4.48□□□□□ -1.69
CHD8-209ENST00000555935 A0A087WTM6 91 aa4.47□□□□□ -1.69
CHD8-209ENST00000555935 IGLV7-43P04211 117 aa4.46□□□□□ -1.69
CHD8-209ENST00000555935 CSAG1Q6PB30 78 aa4.46□□□□□ -1.7
CHD8-209ENST00000555935 NOTCH1P46531 2555 aa4.46□□□□□ -1.7
CHD8-209ENST00000555935 FBN1P35555 2871 aaKnown RBP4.45□□□□□ -1.7
CHD8-209ENST00000555935 NBEAL1Q6ZS30 2694 aa4.45□□□□□ -1.7
CHD8-209ENST00000555935 IGKV2D-30A0A075B6S6 120 aa4.45□□□□□ -1.7
CHD8-209ENST00000555935 NUPR2A6NF83 97 aa4.44□□□□□ -1.7
CHD8-209ENST00000555935 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
CHD8-209ENST00000555935 STAB1Q9NY15 2570 aa4.43□□□□□ -1.7
CHD8-209ENST00000555935 H3BS24 57 aa4.42□□□□□ -1.7
CHD8-209ENST00000555935 CSMD3Q7Z407 3707 aa4.42□□□□□ -1.7
CHD8-209ENST00000555935 COL6A5A8TX70 2615 aa4.42□□□□□ -1.7
CHD8-209ENST00000555935 COL7A1Q02388 2944 aa4.41□□□□□ -1.7
CHD8-209ENST00000555935 DYNC2H1Q8NCM8 4307 aaKnown RBP4.41□□□□□ -1.7
CHD8-209ENST00000555935 DNAH8Q96JB1 4490 aa4.41□□□□□ -1.7
CHD8-209ENST00000555935 STAB2Q8WWQ8 2551 aa4.4□□□□□ -1.71
CHD8-209ENST00000555935 LY6G6CO95867 125 aa4.39□□□□□ -1.71
CHD8-209ENST00000555935 A8MUU9 505 aa4.36□□□□□ -1.71
CHD8-209ENST00000555935 KRTAP3-3Q9BYR6 98 aa4.36□□□□□ -1.71
CHD8-209ENST00000555935 KRTAP3-2Q9BYR7 98 aa4.36□□□□□ -1.71
CHD8-209ENST00000555935 KRTAP13-2Q52LG2 175 aa4.36□□□□□ -1.71
CHD8-209ENST00000555935 SPINK1P00995 79 aa4.35□□□□□ -1.71
CHD8-209ENST00000555935 FRAS1Q86XX4 4008 aa4.35□□□□□ -1.71
CHD8-209ENST00000555935 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
CHD8-209ENST00000555935 PLECQ15149 4684 aaKnown RBP4.33□□□□□ -1.72
CHD8-209ENST00000555935 H0YAA0 97 aa4.33□□□□□ -1.72
CHD8-209ENST00000555935 Q6ZSA8 131 aa4.33□□□□□ -1.72
CHD8-209ENST00000555935 C1orf134Q5TEV5 83 aa4.33□□□□□ -1.72
CHD8-209ENST00000555935 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
CHD8-209ENST00000555935 Q8N1X5 172 aa4.32□□□□□ -1.72
CHD8-209ENST00000555935 DNAH17Q9UFH2 4485 aa4.31□□□□□ -1.72
CHD8-209ENST00000555935 LINC00304Q8N9R0 145 aa4.31□□□□□ -1.72
CHD8-209ENST00000555935 HECTD4Q9Y4D8 3996 aa4.31□□□□□ -1.72
CHD8-209ENST00000555935 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
CHD8-209ENST00000555935 A0A1B0GU33 70 aa4.29□□□□□ -1.72
CHD8-209ENST00000555935 MGAM2Q2M2H8 2515 aa4.29□□□□□ -1.72
CHD8-209ENST00000555935 ROMO1P60602 79 aa4.29□□□□□ -1.72
CHD8-209ENST00000555935 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
CHD8-209ENST00000555935 H1FX-AS1Q4G0G2 97 aa4.27□□□□□ -1.73
CHD8-209ENST00000555935 TYMSOSQ8TAI1 123 aa4.26□□□□□ -1.73
CHD8-209ENST00000555935 K7ERS5 55 aa4.25□□□□□ -1.73
CHD8-209ENST00000555935 RPS29P62273 56 aaKnown RBP4.24□□□□□ -1.73
CHD8-209ENST00000555935 TGP01266 2768 aa4.23□□□□□ -1.73
CHD8-209ENST00000555935 STARD9Q9P2P6 4700 aa4.22□□□□□ -1.73
CHD8-209ENST00000555935 KRTAP10-2P60368 255 aa4.22□□□□□ -1.73
CHD8-209ENST00000555935 MEGF8Q7Z7M0 2845 aa4.22□□□□□ -1.73
CHD8-209ENST00000555935 DNAH2Q9P225 4427 aa4.21□□□□□ -1.74
CHD8-209ENST00000555935 PRKDCP78527 4128 aaKnown RBP4.2□□□□□ -1.74
CHD8-209ENST00000555935 DNAH11Q96DT5 4516 aa4.2□□□□□ -1.74
CHD8-209ENST00000555935 KRTAP3-1Q9BYR8 98 aa4.2□□□□□ -1.74
CHD8-209ENST00000555935 C20orf166-AS1Q96NR2 134 aa4.19□□□□□ -1.74
CHD8-209ENST00000555935 FBN3Q75N90 2809 aa4.19□□□□□ -1.74
CHD8-209ENST00000555935 KRTAP10-1P60331 282 aa4.18□□□□□ -1.74
CHD8-209ENST00000555935 COX6B2Q6YFQ2 88 aa4.17□□□□□ -1.74
CHD8-209ENST00000555935 KMT2AQ03164 3969 aa4.16□□□□□ -1.74
CHD8-209ENST00000555935 DNAH5Q8TE73 4624 aa4.14□□□□□ -1.75
CHD8-209ENST00000555935 P0C880 135 aa4.13□□□□□ -1.75
CHD8-209ENST00000555935 CRIPTQ9P021 101 aa4.13□□□□□ -1.75
CHD8-209ENST00000555935 RPL37P61927 97 aaKnown RBP4.12□□□□□ -1.75
CHD8-209ENST00000555935 LRP1BQ9NZR2 4599 aa4.12□□□□□ -1.75
CHD8-209ENST00000555935 DNAH6Q9C0G6 4158 aa4.12□□□□□ -1.75
CHD8-209ENST00000555935 C9orf92A6NGG3 77 aa4.11□□□□□ -1.75
CHD8-209ENST00000555935 FLG2Q5D862 2391 aaPredicted RBP4.07□□□□□ -1.76
CHD8-209ENST00000555935 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
CHD8-209ENST00000555935 DNHD1Q96M86 4753 aa4.07□□□□□ -1.76
CHD8-209ENST00000555935 KRTAP10-6P60371 365 aaPredicted RBP4.06□□□□□ -1.76
CHD8-209ENST00000555935 TPRXLQ17RH7 258 aa4.06□□□□□ -1.76
CHD8-209ENST00000555935 VPS13BQ7Z7G8 4022 aa4.05□□□□□ -1.76
CHD8-209ENST00000555935 SACSQ9NZJ4 4579 aa4.03□□□□□ -1.76
CHD8-209ENST00000555935 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
CHD8-209ENST00000555935 PKD1P98161 4303 aa4.01□□□□□ -1.77
CHD8-209ENST00000555935 A0A0D9SG42 100 aa4.01□□□□□ -1.77
CHD8-209ENST00000555935 KRTAP15-1Q3LI76 137 aa4□□□□□ -1.77
CHD8-209ENST00000555935 FAT2Q9NYQ8 4349 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 292.1 ms