RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 PKHD1L1Q86WI1 4243 aa4□□□□□ -1.77
PSEN1-214ENST00000555867 KRTAP13-1Q8IUC0 172 aa3.99□□□□□ -1.77
PSEN1-214ENST00000555867 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
PSEN1-214ENST00000555867 IGLV5-52A0A0A0MRZ9 124 aa3.98□□□□□ -1.77
PSEN1-214ENST00000555867 IGKV4-1P06312 121 aa3.98□□□□□ -1.77
PSEN1-214ENST00000555867 IGFL1Q6UW32 110 aa3.98□□□□□ -1.77
PSEN1-214ENST00000555867 TMEM258P61165 79 aa3.97□□□□□ -1.77
PSEN1-214ENST00000555867 FAT3Q8TDW7 4589 aa3.96□□□□□ -1.78
PSEN1-214ENST00000555867 LINC00483Q53H64 154 aa3.96□□□□□ -1.78
PSEN1-214ENST00000555867 SCXQ7RTU7 201 aa3.96□□□□□ -1.78
PSEN1-214ENST00000555867 PANO1I0J062 215 aa3.95□□□□□ -1.78
PSEN1-214ENST00000555867 NDUFC1O43677 76 aa3.95□□□□□ -1.78
PSEN1-214ENST00000555867 KLKP1Q107X0 134 aa3.95□□□□□ -1.78
PSEN1-214ENST00000555867 KRTAP11-1Q8IUC1 163 aa3.95□□□□□ -1.78
PSEN1-214ENST00000555867 FAM30AQ9NZY2 134 aa3.95□□□□□ -1.78
PSEN1-214ENST00000555867 SS18L2Q9UHA2 77 aa3.95□□□□□ -1.78
PSEN1-214ENST00000555867 A0A087WSZ3 146 aa3.94□□□□□ -1.78
PSEN1-214ENST00000555867 J3KT08 172 aa3.94□□□□□ -1.78
PSEN1-214ENST00000555867 ZNF861PO60384 105 aa3.94□□□□□ -1.78
PSEN1-214ENST00000555867 OXTP01178 125 aa3.94□□□□□ -1.78
PSEN1-214ENST00000555867 KRTAP10-4P60372 401 aaPredicted RBP3.93□□□□□ -1.78
PSEN1-214ENST00000555867 PSORS1C2Q9UIG4 136 aa3.93□□□□□ -1.78
PSEN1-214ENST00000555867 TNXBP22105 4242 aa3.92□□□□□ -1.78
PSEN1-214ENST00000555867 HCG22E2RYF7 251 aa3.92□□□□□ -1.78
PSEN1-214ENST00000555867 ATP5EP56381 51 aaPredicted RBP3.92□□□□□ -1.78
PSEN1-214ENST00000555867 DSCR10P59022 87 aa3.92□□□□□ -1.78
PSEN1-214ENST00000555867 C20orf197Q8N268 126 aa3.92□□□□□ -1.78
PSEN1-214ENST00000555867 MT1HL1P0DM35 61 aa3.91□□□□□ -1.78
PSEN1-214ENST00000555867 Q8N9L7 120 aa3.91□□□□□ -1.78
PSEN1-214ENST00000555867 OCR1Q9BZK8 76 aa3.91□□□□□ -1.78
PSEN1-214ENST00000555867 DNAH8Q96JB1 4490 aa3.91□□□□□ -1.78
PSEN1-214ENST00000555867 K7EQZ3 153 aa3.9□□□□□ -1.79
PSEN1-214ENST00000555867 NDUFB1O75438 58 aa3.9□□□□□ -1.79
PSEN1-214ENST00000555867 IGLV7-43P04211 117 aa3.9□□□□□ -1.79
PSEN1-214ENST00000555867 RPS28P62857 69 aaKnown RBP3.9□□□□□ -1.79
PSEN1-214ENST00000555867 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
PSEN1-214ENST00000555867 TMEM254Q8TBM7 123 aa3.9□□□□□ -1.79
PSEN1-214ENST00000555867 A8MWP4 228 aa3.89□□□□□ -1.79
PSEN1-214ENST00000555867 CD164Q04900 197 aa3.89□□□□□ -1.79
PSEN1-214ENST00000555867 Q6ZSA8 131 aa3.89□□□□□ -1.79
PSEN1-214ENST00000555867 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
PSEN1-214ENST00000555867 IGLV9-49A0A0B4J1Y8 123 aa3.88□□□□□ -1.79
PSEN1-214ENST00000555867 C5orf47Q569G3 176 aa3.88□□□□□ -1.79
PSEN1-214ENST00000555867 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
PSEN1-214ENST00000555867 PRR15Q8IV56 129 aa3.88□□□□□ -1.79
PSEN1-214ENST00000555867 FAM236DA0A1B0GTK5 79 aa3.87□□□□□ -1.79
PSEN1-214ENST00000555867 H3BPC8 53 aa3.87□□□□□ -1.79
PSEN1-214ENST00000555867 H7BZZ5 65 aa3.87□□□□□ -1.79
PSEN1-214ENST00000555867 FAM236CP0DP71 79 aa3.87□□□□□ -1.79
PSEN1-214ENST00000555867 MOBPQ13875 183 aa3.87□□□□□ -1.79
PSEN1-214ENST00000555867 SSBP3-AS1Q7Z2R9 100 aa3.87□□□□□ -1.79
PSEN1-214ENST00000555867 CIRBP-AS1Q8TBR5 109 aa3.87□□□□□ -1.79
PSEN1-214ENST00000555867 A0A0U1RQV1 116 aa3.86□□□□□ -1.79
PSEN1-214ENST00000555867 FAM229BQ4G0N7 80 aa3.86□□□□□ -1.79
PSEN1-214ENST00000555867 A0A0G2JQZ4 141 aa3.85□□□□□ -1.79
PSEN1-214ENST00000555867 MP68P56378 58 aa3.85□□□□□ -1.79
PSEN1-214ENST00000555867 CASC2Q6XLA1 102 aa3.85□□□□□ -1.79
PSEN1-214ENST00000555867 CYSTM1Q9H1C7 97 aa3.85□□□□□ -1.79
PSEN1-214ENST00000555867 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
PSEN1-214ENST00000555867 ASB16-AS1Q495Z4 193 aa3.84□□□□□ -1.79
PSEN1-214ENST00000555867 SNURFQ9Y675 71 aa3.84□□□□□ -1.79
PSEN1-214ENST00000555867 SERP1Q9Y6X1 66 aa3.84□□□□□ -1.79
PSEN1-214ENST00000555867 WFDC13Q8IUB5 93 aa3.83□□□□□ -1.8
PSEN1-214ENST00000555867 Q8N9P0 234 aaPredicted RBP3.83□□□□□ -1.8
PSEN1-214ENST00000555867 Q96NJ1 140 aa3.83□□□□□ -1.8
PSEN1-214ENST00000555867 TP53AIP1Q9HCN2 124 aa3.83□□□□□ -1.8
PSEN1-214ENST00000555867 MMP24-AS1A0A0U1RRL7 71 aa3.82□□□□□ -1.8
PSEN1-214ENST00000555867 hDV103S1A0JD37 113 aa3.82□□□□□ -1.8
PSEN1-214ENST00000555867 DEFB116Q30KQ4 102 aa3.82□□□□□ -1.8
PSEN1-214ENST00000555867 Q5XG85 94 aa3.82□□□□□ -1.8
PSEN1-214ENST00000555867 A0A1B0GVX0 72 aa3.81□□□□□ -1.8
PSEN1-214ENST00000555867 ZCCHC13Q8WW36 166 aaKnown RBP3.81□□□□□ -1.8
PSEN1-214ENST00000555867 LIMD2Q9BT23 127 aa3.81□□□□□ -1.8
PSEN1-214ENST00000555867 C8orf17Q9NRJ1 99 aa3.81□□□□□ -1.8
PSEN1-214ENST00000555867 C8orf87E5RJ46 101 aa3.8□□□□□ -1.8
PSEN1-214ENST00000555867 LPAP08519 4548 aa3.8□□□□□ -1.8
PSEN1-214ENST00000555867 FAT4Q6V0I7 4981 aa3.8□□□□□ -1.8
PSEN1-214ENST00000555867 TRAV22A0A0B4J277 110 aa3.79□□□□□ -1.8
PSEN1-214ENST00000555867 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
PSEN1-214ENST00000555867 HRCT1Q6UXD1 115 aa3.79□□□□□ -1.8
PSEN1-214ENST00000555867 H0Y9P7 68 aa3.78□□□□□ -1.8
PSEN1-214ENST00000555867 MRPL34Q9BQ48 92 aaKnown RBP3.78□□□□□ -1.8
PSEN1-214ENST00000555867 ANAPC11Q9NYG5 84 aa3.78□□□□□ -1.8
PSEN1-214ENST00000555867 MUC2Q02817 5179 aa3.78□□□□□ -1.8
PSEN1-214ENST00000555867 IGHV6-1A0A0B4J1U7 121 aa3.77□□□□□ -1.81
PSEN1-214ENST00000555867 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
PSEN1-214ENST00000555867 SPINK6Q6UWN8 80 aa3.77□□□□□ -1.81
PSEN1-214ENST00000555867 SPANXA2-OT1Q8N9U9 137 aa3.77□□□□□ -1.81
PSEN1-214ENST00000555867 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
PSEN1-214ENST00000555867 SMIM26A0A096LP01 95 aa3.76□□□□□ -1.81
PSEN1-214ENST00000555867 RPS29P62273 56 aaKnown RBP3.76□□□□□ -1.81
PSEN1-214ENST00000555867 LINC00208Q96KT6 92 aa3.76□□□□□ -1.81
PSEN1-214ENST00000555867 CYP4F30PQ9H0H9 118 aa3.76□□□□□ -1.81
PSEN1-214ENST00000555867 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
PSEN1-214ENST00000555867 A0A087X002 238 aa3.74□□□□□ -1.81
PSEN1-214ENST00000555867 SPINK1P00995 79 aa3.74□□□□□ -1.81
PSEN1-214ENST00000555867 KRTAP1-4P0C5Y4 121 aa3.74□□□□□ -1.81
PSEN1-214ENST00000555867 SPAG11AQ6PDA7 123 aa3.74□□□□□ -1.81
PSEN1-214ENST00000555867 C1orf64Q8NEQ6 169 aa3.74□□□□□ -1.81
PSEN1-214ENST00000555867 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms