RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 TEX49A0A1B0GTD5 131 aa5.07□□□□□ -1.6
VIPAS39-207ENST00000555854 DEFB105AQ8NG35 78 aa5.07□□□□□ -1.6
VIPAS39-207ENST00000555854 LAMTOR3Q9UHA4 124 aa5.07□□□□□ -1.6
VIPAS39-207ENST00000555854 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
VIPAS39-207ENST00000555854 SMIM11BQ8TCY0 68 aa5.06□□□□□ -1.6
VIPAS39-207ENST00000555854 LIMD2Q9BT23 127 aa5.06□□□□□ -1.6
VIPAS39-207ENST00000555854 JMJD7-PLA2G4BH0Y9G9 81 aa5.05□□□□□ -1.6
VIPAS39-207ENST00000555854 TMEM256-PLSCR3K7ERE1 68 aa5.05□□□□□ -1.6
VIPAS39-207ENST00000555854 CD164Q04900 197 aa5.05□□□□□ -1.6
VIPAS39-207ENST00000555854 C9orf92A6NGG3 77 aa5.04□□□□□ -1.6
VIPAS39-207ENST00000555854 Q5XG85 94 aa5.04□□□□□ -1.6
VIPAS39-207ENST00000555854 LINC00643Q86TS7 51 aa5.04□□□□□ -1.6
VIPAS39-207ENST00000555854 ORMDL1Q9P0S3 153 aa5.04□□□□□ -1.6
VIPAS39-207ENST00000555854 PCOTHQ58A44 107 aa5.03□□□□□ -1.6
VIPAS39-207ENST00000555854 OBSCN-AS1Q96MR7 158 aa5.03□□□□□ -1.6
VIPAS39-207ENST00000555854 MT-ATP8P03928 68 aa5.02□□□□□ -1.61
VIPAS39-207ENST00000555854 PDE6GP18545 87 aa5.02□□□□□ -1.61
VIPAS39-207ENST00000555854 C1orf195Q5TG92 126 aa5.02□□□□□ -1.61
VIPAS39-207ENST00000555854 TRBV7-7A0A0K0K1E9 115 aa5.01□□□□□ -1.61
VIPAS39-207ENST00000555854 FAM218AQ96MZ4 157 aa5□□□□□ -1.61
VIPAS39-207ENST00000555854 IGLV8-61A0A075B6I0 122 aa4.99□□□□□ -1.61
VIPAS39-207ENST00000555854 MT1HP80294 61 aa4.99□□□□□ -1.61
VIPAS39-207ENST00000555854 LINC00575Q6W349 94 aa4.99□□□□□ -1.61
VIPAS39-207ENST00000555854 Q6ZQY7 126 aa4.98□□□□□ -1.61
VIPAS39-207ENST00000555854 hADV29S1A0JD25 119 aa4.97□□□□□ -1.61
VIPAS39-207ENST00000555854 RPL37P61927 97 aaKnown RBP4.97□□□□□ -1.61
VIPAS39-207ENST00000555854 ATP5EP2Q5VTU8 51 aa4.97□□□□□ -1.61
VIPAS39-207ENST00000555854 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.97□□□□□ -1.61
VIPAS39-207ENST00000555854 CCKP06307 115 aa4.96□□□□□ -1.62
VIPAS39-207ENST00000555854 NDUFV3P56181 108 aaKnown RBP4.96□□□□□ -1.62
VIPAS39-207ENST00000555854 IGFL1Q6UW32 110 aa4.96□□□□□ -1.62
VIPAS39-207ENST00000555854 ANAPC13Q9BS18 74 aa4.96□□□□□ -1.62
VIPAS39-207ENST00000555854 LOC110117498A0A087WWA1 95 aa4.94□□□□□ -1.62
VIPAS39-207ENST00000555854 RBM3P98179 157 aaKnown RBP4.94□□□□□ -1.62
VIPAS39-207ENST00000555854 Q6JHZ5 121 aa4.94□□□□□ -1.62
VIPAS39-207ENST00000555854 A0A1B0GW54 56 aa4.93□□□□□ -1.62
VIPAS39-207ENST00000555854 F8WEM9 126 aa4.92□□□□□ -1.62
VIPAS39-207ENST00000555854 DSCR8Q96T75 97 aa4.91□□□□□ -1.62
VIPAS39-207ENST00000555854 UBL5Q9BZL1 73 aa4.91□□□□□ -1.62
VIPAS39-207ENST00000555854 C14orf132Q9NPU4 83 aa4.91□□□□□ -1.62
VIPAS39-207ENST00000555854 ATOX1O00244 68 aa4.9□□□□□ -1.63
VIPAS39-207ENST00000555854 USH2AO75445 5202 aa4.89□□□□□ -1.63
VIPAS39-207ENST00000555854 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
VIPAS39-207ENST00000555854 Q6ZQT0 140 aa4.88□□□□□ -1.63
VIPAS39-207ENST00000555854 LINC00846Q9NV44 126 aa4.88□□□□□ -1.63
VIPAS39-207ENST00000555854 UQCRQO14949 82 aa4.87□□□□□ -1.63
VIPAS39-207ENST00000555854 SMIM20Q8N5G0 67 aa4.87□□□□□ -1.63
VIPAS39-207ENST00000555854 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
VIPAS39-207ENST00000555854 HIST1H4AP62805 103 aaKnown RBP4.86□□□□□ -1.63
VIPAS39-207ENST00000555854 TRBV7-4A0A0J9YYF1 115 aa4.85□□□□□ -1.63
VIPAS39-207ENST00000555854 FAM236AA0A1B0GUQ0 79 aa4.85□□□□□ -1.63
VIPAS39-207ENST00000555854 FAM236BA0A1B0GV22 79 aa4.85□□□□□ -1.63
VIPAS39-207ENST00000555854 CXCL6P80162 114 aa4.85□□□□□ -1.63
VIPAS39-207ENST00000555854 Q75L30 129 aa4.85□□□□□ -1.63
VIPAS39-207ENST00000555854 Q96NJ1 140 aa4.85□□□□□ -1.63
VIPAS39-207ENST00000555854 CRCT1Q9UGL9 99 aa4.85□□□□□ -1.63
VIPAS39-207ENST00000555854 COX7CP15954 63 aa4.83□□□□□ -1.64
VIPAS39-207ENST00000555854 SERP2Q8N6R1 65 aa4.82□□□□□ -1.64
VIPAS39-207ENST00000555854 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
VIPAS39-207ENST00000555854 A0A087WSZ3 146 aa4.81□□□□□ -1.64
VIPAS39-207ENST00000555854 A0A1W2PNM2 257 aa4.81□□□□□ -1.64
VIPAS39-207ENST00000555854 COX6B2Q6YFQ2 88 aa4.81□□□□□ -1.64
VIPAS39-207ENST00000555854 C20orf166-AS1Q96NR2 134 aa4.81□□□□□ -1.64
VIPAS39-207ENST00000555854 A8MUU9 505 aa4.8□□□□□ -1.64
VIPAS39-207ENST00000555854 SS18L2Q9UHA2 77 aa4.8□□□□□ -1.64
VIPAS39-207ENST00000555854 IGKV3D-7A0A0C4DH55 119 aa4.79□□□□□ -1.64
VIPAS39-207ENST00000555854 CCDC179H3BU77 68 aa4.78□□□□□ -1.64
VIPAS39-207ENST00000555854 M0R2T5 61 aa4.78□□□□□ -1.64
VIPAS39-207ENST00000555854 ATP11AUNQ6ZP68 121 aa4.78□□□□□ -1.64
VIPAS39-207ENST00000555854 Q6ZVQ6 151 aa4.78□□□□□ -1.64
VIPAS39-207ENST00000555854 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
VIPAS39-207ENST00000555854 DSCR10P59022 87 aa4.77□□□□□ -1.65
VIPAS39-207ENST00000555854 NREPQ16612 68 aa4.77□□□□□ -1.65
VIPAS39-207ENST00000555854 TRAV7A0A075B6U4 112 aa4.76□□□□□ -1.65
VIPAS39-207ENST00000555854 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
VIPAS39-207ENST00000555854 NOTCH2NLQ7Z3S9 236 aa4.74□□□□□ -1.65
VIPAS39-207ENST00000555854 TMEM258P61165 79 aa4.73□□□□□ -1.65
VIPAS39-207ENST00000555854 BPY2O14599 106 aa4.72□□□□□ -1.65
VIPAS39-207ENST00000555854 NDUFC1O43677 76 aa4.72□□□□□ -1.65
VIPAS39-207ENST00000555854 LINC00472Q9H8W2 130 aa4.72□□□□□ -1.65
VIPAS39-207ENST00000555854 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
VIPAS39-207ENST00000555854 A0A087WVE0 104 aa4.7□□□□□ -1.66
VIPAS39-207ENST00000555854 IGKV4-1P06312 121 aa4.7□□□□□ -1.66
VIPAS39-207ENST00000555854 DEFB116Q30KQ4 102 aa4.7□□□□□ -1.66
VIPAS39-207ENST00000555854 MPLKIPQ8TAP9 179 aa4.69□□□□□ -1.66
VIPAS39-207ENST00000555854 HRES1P13985 223 aa4.68□□□□□ -1.66
VIPAS39-207ENST00000555854 LINC00313P59037 77 aa4.68□□□□□ -1.66
VIPAS39-207ENST00000555854 KLKP1Q107X0 134 aa4.68□□□□□ -1.66
VIPAS39-207ENST00000555854 ATP5EP56381 51 aaPredicted RBP4.67□□□□□ -1.66
VIPAS39-207ENST00000555854 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
VIPAS39-207ENST00000555854 IGHV6-1A0A0B4J1U7 121 aa4.65□□□□□ -1.67
VIPAS39-207ENST00000555854 J3KT08 172 aa4.65□□□□□ -1.67
VIPAS39-207ENST00000555854 MT2AP02795 61 aa4.65□□□□□ -1.67
VIPAS39-207ENST00000555854 A0A1B0GVX0 72 aa4.63□□□□□ -1.67
VIPAS39-207ENST00000555854 MT1FP04733 61 aa4.63□□□□□ -1.67
VIPAS39-207ENST00000555854 C20orf197Q8N268 126 aa4.63□□□□□ -1.67
VIPAS39-207ENST00000555854 C5orf47Q569G3 176 aa4.62□□□□□ -1.67
VIPAS39-207ENST00000555854 OCR1Q9BZK8 76 aa4.62□□□□□ -1.67
VIPAS39-207ENST00000555854 C8orf87E5RJ46 101 aa4.6□□□□□ -1.67
VIPAS39-207ENST00000555854 FAM236DA0A1B0GTK5 79 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms