RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ATP11AUNQ6ZP68 121 aa10.75□□□□□ -0.69
VTI1B-205ENST00000555543 C20orf166-AS1Q96NR2 134 aa10.75□□□□□ -0.69
VTI1B-205ENST00000555543 LOC110117498A0A087WWA1 95 aa10.73□□□□□ -0.69
VTI1B-205ENST00000555543 K7ERU9 68 aa10.73□□□□□ -0.69
VTI1B-205ENST00000555543 IGKV4-1P06312 121 aa10.73□□□□□ -0.69
VTI1B-205ENST00000555543 DEFB116Q30KQ4 102 aa10.73□□□□□ -0.69
VTI1B-205ENST00000555543 DSCR8Q96T75 97 aa10.73□□□□□ -0.69
VTI1B-205ENST00000555543 A8MUU9 505 aa10.72□□□□□ -0.69
VTI1B-205ENST00000555543 PDE6GP18545 87 aa10.72□□□□□ -0.69
VTI1B-205ENST00000555543 VPS25Q9BRG1 176 aa10.72□□□□□ -0.69
VTI1B-205ENST00000555543 LINC00472Q9H8W2 130 aa10.72□□□□□ -0.69
VTI1B-205ENST00000555543 C21orf62-AS1Q17RA5 79 aa10.69□□□□□ -0.7
VTI1B-205ENST00000555543 Q6ZQT0 140 aa10.69□□□□□ -0.7
VTI1B-205ENST00000555543 FLGP20930 4061 aaPredicted RBP10.67□□□□□ -0.7
VTI1B-205ENST00000555543 KRTAP16-1A8MUX0 517 aa10.66□□□□□ -0.7
VTI1B-205ENST00000555543 NOTCH2NLQ7Z3S9 236 aa10.66□□□□□ -0.7
VTI1B-205ENST00000555543 KRTAP9-6A0A140TA67 174 aa10.64□□□□□ -0.71
VTI1B-205ENST00000555543 FAM240AA0A1B0GVK7 77 aa10.64□□□□□ -0.71
VTI1B-205ENST00000555543 LINC00313P59037 77 aa10.64□□□□□ -0.71
VTI1B-205ENST00000555543 COX6B2Q6YFQ2 88 aa10.64□□□□□ -0.71
VTI1B-205ENST00000555543 ACYP1P07311 99 aa10.62□□□□□ -0.71
VTI1B-205ENST00000555543 IGHV6-1A0A0B4J1U7 121 aa10.61□□□□□ -0.71
VTI1B-205ENST00000555543 A0A1B0GVX0 72 aa10.56□□□□□ -0.72
VTI1B-205ENST00000555543 A0A1B0GW54 56 aa10.56□□□□□ -0.72
VTI1B-205ENST00000555543 KRTAP10-6P60371 365 aaPredicted RBP10.53□□□□□ -0.72
VTI1B-205ENST00000555543 LINC00846Q9NV44 126 aa10.53□□□□□ -0.72
VTI1B-205ENST00000555543 LORP23490 312 aaPredicted RBP10.52□□□□□ -0.73
VTI1B-205ENST00000555543 J3KT08 172 aa10.51□□□□□ -0.73
VTI1B-205ENST00000555543 M0R2T5 61 aa10.51□□□□□ -0.73
VTI1B-205ENST00000555543 C8orf87E5RJ46 101 aa10.5□□□□□ -0.73
VTI1B-205ENST00000555543 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
VTI1B-205ENST00000555543 UBL5Q9BZL1 73 aa10.46□□□□□ -0.73
VTI1B-205ENST00000555543 Q6ZVQ6 151 aa10.43□□□□□ -0.74
VTI1B-205ENST00000555543 LINC00643Q86TS7 51 aa10.43□□□□□ -0.74
VTI1B-205ENST00000555543 A8MWP4 228 aa10.41□□□□□ -0.74
VTI1B-205ENST00000555543 NREPQ16612 68 aa10.41□□□□□ -0.74
VTI1B-205ENST00000555543 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.74
VTI1B-205ENST00000555543 NDUFB1O75438 58 aa10.4□□□□□ -0.74
VTI1B-205ENST00000555543 C8orf17Q9NRJ1 99 aa10.38□□□□□ -0.75
VTI1B-205ENST00000555543 HRES1P13985 223 aa10.37□□□□□ -0.75
VTI1B-205ENST00000555543 ATP5EP2Q5VTU8 51 aa10.35□□□□□ -0.75
VTI1B-205ENST00000555543 Q8N9P0 234 aaPredicted RBP10.35□□□□□ -0.75
VTI1B-205ENST00000555543 MPLKIPQ8TAP9 179 aa10.35□□□□□ -0.75
VTI1B-205ENST00000555543 ZCCHC13Q8WW36 166 aaKnown RBP10.35□□□□□ -0.75
VTI1B-205ENST00000555543 MT-ATP8P03928 68 aa10.34□□□□□ -0.75
VTI1B-205ENST00000555543 FSIP2Q5CZC0 6907 aa10.32□□□□□ -0.76
VTI1B-205ENST00000555543 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
VTI1B-205ENST00000555543 CXCL6P80162 114 aa10.3□□□□□ -0.76
VTI1B-205ENST00000555543 BPY2O14599 106 aa10.29□□□□□ -0.76
VTI1B-205ENST00000555543 FAM236DA0A1B0GTK5 79 aa10.28□□□□□ -0.76
VTI1B-205ENST00000555543 FAM236CP0DP71 79 aa10.28□□□□□ -0.76
VTI1B-205ENST00000555543 MMP24-AS1A0A0U1RRL7 71 aa10.27□□□□□ -0.77
VTI1B-205ENST00000555543 RBM12B-AS1Q9P1G2 102 aa10.26□□□□□ -0.77
VTI1B-205ENST00000555543 CRCT1Q9UGL9 99 aa10.26□□□□□ -0.77
VTI1B-205ENST00000555543 K7EQZ3 153 aa10.24□□□□□ -0.77
VTI1B-205ENST00000555543 SPINK7P58062 85 aa10.24□□□□□ -0.77
VTI1B-205ENST00000555543 IMUPQ9GZP8 106 aa10.24□□□□□ -0.77
VTI1B-205ENST00000555543 TMEM254Q8TBM7 123 aa10.2□□□□□ -0.78
VTI1B-205ENST00000555543 MRPL34Q9BQ48 92 aaKnown RBP10.19□□□□□ -0.78
VTI1B-205ENST00000555543 KRTAP9-8Q9BYQ0 159 aa10.19□□□□□ -0.78
VTI1B-205ENST00000555543 HIST1H4AP62805 103 aaKnown RBP10.17□□□□□ -0.78
VTI1B-205ENST00000555543 hDV103S1A0JD37 113 aa10.16□□□□□ -0.78
VTI1B-205ENST00000555543 Q8N9L7 120 aa10.16□□□□□ -0.78
VTI1B-205ENST00000555543 A0A087WVE0 104 aa10.11□□□□□ -0.79
VTI1B-205ENST00000555543 WFDC13Q8IUB5 93 aa10.11□□□□□ -0.79
VTI1B-205ENST00000555543 NDUFS5O43920 106 aa10.09□□□□□ -0.79
VTI1B-205ENST00000555543 SCGB1A1P11684 91 aa10.07□□□□□ -0.8
VTI1B-205ENST00000555543 MT2AP02795 61 aa10.06□□□□□ -0.8
VTI1B-205ENST00000555543 USH2AO75445 5202 aa10.05□□□□□ -0.8
VTI1B-205ENST00000555543 FAM236AA0A1B0GUQ0 79 aa10.03□□□□□ -0.8
VTI1B-205ENST00000555543 FAM236BA0A1B0GV22 79 aa10.03□□□□□ -0.8
VTI1B-205ENST00000555543 CASC2Q6XLA1 102 aa10.03□□□□□ -0.8
VTI1B-205ENST00000555543 HCG22E2RYF7 251 aa10.02□□□□□ -0.81
VTI1B-205ENST00000555543 Q5W150 140 aa10.02□□□□□ -0.81
VTI1B-205ENST00000555543 MT1FP04733 61 aa10□□□□□ -0.81
VTI1B-205ENST00000555543 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
VTI1B-205ENST00000555543 IGKV2-30P06310 120 aa9.95□□□□□ -0.82
VTI1B-205ENST00000555543 ATOX1O00244 68 aa9.93□□□□□ -0.82
VTI1B-205ENST00000555543 SSPOA2VEC9 5147 aa9.93□□□□□ -0.82
VTI1B-205ENST00000555543 C7orf65Q6ZTY9 151 aa9.92□□□□□ -0.82
VTI1B-205ENST00000555543 KRTAP10-10P60014 251 aa9.9□□□□□ -0.82
VTI1B-205ENST00000555543 KRTAP9-3Q9BYQ3 159 aa9.87□□□□□ -0.83
VTI1B-205ENST00000555543 SMIM20Q8N5G0 67 aa9.86□□□□□ -0.83
VTI1B-205ENST00000555543 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
VTI1B-205ENST00000555543 OCR1Q9BZK8 76 aa9.83□□□□□ -0.84
VTI1B-205ENST00000555543 LCE2BO14633 110 aa9.82□□□□□ -0.84
VTI1B-205ENST00000555543 ANAPC13Q9BS18 74 aa9.82□□□□□ -0.84
VTI1B-205ENST00000555543 TRAV7A0A075B6U4 112 aa9.81□□□□□ -0.84
VTI1B-205ENST00000555543 SERP2Q8N6R1 65 aa9.8□□□□□ -0.84
VTI1B-205ENST00000555543 C4orf26Q17RF5 130 aa9.78□□□□□ -0.84
VTI1B-205ENST00000555543 TP53AIP1Q9HCN2 124 aa9.77□□□□□ -0.85
VTI1B-205ENST00000555543 UQCRQO14949 82 aa9.76□□□□□ -0.85
VTI1B-205ENST00000555543 COX7CP15954 63 aa9.73□□□□□ -0.85
VTI1B-205ENST00000555543 PCP4P48539 62 aa9.7□□□□□ -0.86
VTI1B-205ENST00000555543 C5orf47Q569G3 176 aa9.68□□□□□ -0.86
VTI1B-205ENST00000555543 KRTAP3-1Q9BYR8 98 aa9.67□□□□□ -0.86
VTI1B-205ENST00000555543 FCGBPQ9Y6R7 5405 aaPredicted RBP9.67□□□□□ -0.86
VTI1B-205ENST00000555543 TRAV22A0A0B4J277 110 aa9.64□□□□□ -0.87
VTI1B-205ENST00000555543 H0Y9P7 68 aa9.63□□□□□ -0.87
VTI1B-205ENST00000555543 MP68P56378 58 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms