RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	PLN	P26678	52 aa		2.55	□□□□□ -2
PSMC6-208	ENST00000554956	RPL37	P61927	97 aa	Known RBP	2.55	□□□□□ -2
PSMC6-208	ENST00000554956	SVBP	Q8N300	66 aa		2.55	□□□□□ -2
PSMC6-208	ENST00000554956	ANKRD29	Q8N6D5	301 aa		2.55	□□□□□ -2
PSMC6-208	ENST00000554956	C1orf64	Q8NEQ6	169 aa		2.55	□□□□□ -2
PSMC6-208	ENST00000554956	OR13C6P	Q8NH95	151 aa		2.55	□□□□□ -2
PSMC6-208	ENST00000554956	MIEN1	Q9BRT3	115 aa		2.55	□□□□□ -2
PSMC6-208	ENST00000554956		R4GN34	69 aa		2.55	□□□□□ -2
PSMC6-208	ENST00000554956		A0A1B0GU33	70 aa		2.54	□□□□□ -2
PSMC6-208	ENST00000554956	AKR1D1	P51857	326 aa		2.54	□□□□□ -2
PSMC6-208	ENST00000554956	ELOF1	P60002	83 aa	Known RBP	2.54	□□□□□ -2
PSMC6-208	ENST00000554956		Q5XG85	94 aa		2.54	□□□□□ -2
PSMC6-208	ENST00000554956	LIMD2	Q9BT23	127 aa		2.54	□□□□□ -2
PSMC6-208	ENST00000554956	SPANXC	Q9NY87	97 aa		2.54	□□□□□ -2
PSMC6-208	ENST00000554956	LAMTOR3	Q9UHA4	124 aa		2.54	□□□□□ -2
PSMC6-208	ENST00000554956	COX7B	P24311	80 aa		2.53	□□□□□ -2
PSMC6-208	ENST00000554956	PRO1933	Q9H354	126 aa		2.53	□□□□□ -2
PSMC6-208	ENST00000554956	HSPB8	Q9UJY1	196 aa		2.53	□□□□□ -2
PSMC6-208	ENST00000554956	IGLV5-48	A0A075B6I7	105 aa		2.52	□□□□□ -2.01
PSMC6-208	ENST00000554956	TEX49	A0A1B0GTD5	131 aa		2.52	□□□□□ -2.01
PSMC6-208	ENST00000554956	SYS1-DBNDD2	H3BUS1	97 aa		2.52	□□□□□ -2.01
PSMC6-208	ENST00000554956	HINT1	P49773	126 aa	Predicted RBP	2.52	□□□□□ -2.01
PSMC6-208	ENST00000554956	COX6B2	Q6YFQ2	88 aa		2.52	□□□□□ -2.01
PSMC6-208	ENST00000554956	SPANXD	Q9BXN6	97 aa		2.52	□□□□□ -2.01
PSMC6-208	ENST00000554956	USH2A	O75445	5202 aa		2.51	□□□□□ -2.01
PSMC6-208	ENST00000554956		A0A1B0GV90	55 aa		2.51	□□□□□ -2.01
PSMC6-208	ENST00000554956	ZNF815P	A8K554	130 aa		2.51	□□□□□ -2.01
PSMC6-208	ENST00000554956	TIMM17B	O60830	172 aa		2.51	□□□□□ -2.01
PSMC6-208	ENST00000554956	HRES1	P13985	223 aa		2.51	□□□□□ -2.01
PSMC6-208	ENST00000554956		A0A1B0GW54	56 aa		2.5	□□□□□ -2.01
PSMC6-208	ENST00000554956	LINC01545	Q5VT33	79 aa		2.5	□□□□□ -2.01
PSMC6-208	ENST00000554956		Q6Q795	121 aa		2.5	□□□□□ -2.01
PSMC6-208	ENST00000554956	SSPO	A2VEC9	5147 aa		2.5	□□□□□ -2.01
PSMC6-208	ENST00000554956	TRBV7-6	A0A0J9YX20	115 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST1H2BK	O60814	126 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST1H2BJ	P06899	126 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	C3orf79	P0CE67	100 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST1H2BO	P23527	126 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST1H2BB	P33778	126 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST1H2BD	P58876	126 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST1H2BC	P62807	126 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST2H2BE	Q16778	126 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	SMIM11B	Q8TCY0	68 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST1H2BH	Q93079	126 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	C14orf144	Q96I85	54 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	OBSCN-AS1	Q96MR7	158 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST1H2BN	Q99877	126 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	HIST1H2BM	Q99879	126 aa		2.49	□□□□□ -2.01
PSMC6-208	ENST00000554956	C2orf91	Q6ZV80	131 aa		2.48	□□□□□ -2.01
PSMC6-208	ENST00000554956	MUSTN1	Q8IVN3	82 aa		2.48	□□□□□ -2.01
PSMC6-208	ENST00000554956	KRTAP5-8	O75690	187 aa		2.47	□□□□□ -2.01
PSMC6-208	ENST00000554956	MT2A	P02795	61 aa		2.47	□□□□□ -2.01
PSMC6-208	ENST00000554956	ATOH7	Q8N100	152 aa		2.47	□□□□□ -2.01
PSMC6-208	ENST00000554956	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	2.47	□□□□□ -2.01
PSMC6-208	ENST00000554956	TRBV7-7	A0A0K0K1E9	115 aa		2.46	□□□□□ -2.02
PSMC6-208	ENST00000554956	TCL1B	O95988	128 aa		2.46	□□□□□ -2.02
PSMC6-208	ENST00000554956	MT1F	P04733	61 aa		2.46	□□□□□ -2.02
PSMC6-208	ENST00000554956	KRTAP5-7	Q6L8G8	165 aa		2.46	□□□□□ -2.02
PSMC6-208	ENST00000554956	LINC00575	Q6W349	94 aa		2.46	□□□□□ -2.02
PSMC6-208	ENST00000554956	TSTD3	H0UI37	97 aa		2.45	□□□□□ -2.02
PSMC6-208	ENST00000554956		H3BUT2	72 aa		2.45	□□□□□ -2.02
PSMC6-208	ENST00000554956	DLEU1	O43261	78 aa		2.45	□□□□□ -2.02
PSMC6-208	ENST00000554956	IFITM1	P13164	125 aa		2.45	□□□□□ -2.02
PSMC6-208	ENST00000554956	KRTDAP	P60985	99 aa		2.45	□□□□□ -2.02
PSMC6-208	ENST00000554956	OCIAD2	Q56VL3	154 aa		2.45	□□□□□ -2.02
PSMC6-208	ENST00000554956	ATP11AUN	Q6ZP68	121 aa		2.45	□□□□□ -2.02
PSMC6-208	ENST00000554956		Q6ZQY7	126 aa		2.45	□□□□□ -2.02
PSMC6-208	ENST00000554956		H3BPC8	53 aa		2.44	□□□□□ -2.02
PSMC6-208	ENST00000554956	SMIM20	Q8N5G0	67 aa		2.44	□□□□□ -2.02
PSMC6-208	ENST00000554956	CLEC2B	Q92478	149 aa		2.44	□□□□□ -2.02
PSMC6-208	ENST00000554956		Q96NJ1	140 aa		2.44	□□□□□ -2.02
PSMC6-208	ENST00000554956	C20orf166-AS1	Q96NR2	134 aa		2.44	□□□□□ -2.02
PSMC6-208	ENST00000554956	TRAV13-2	A0A0B4J235	113 aa		2.43	□□□□□ -2.02
PSMC6-208	ENST00000554956	hADV29S1	A0JD25	119 aa		2.43	□□□□□ -2.02
PSMC6-208	ENST00000554956	PYY3	Q5JQD4	70 aa		2.43	□□□□□ -2.02
PSMC6-208	ENST00000554956		Q6JHZ5	121 aa		2.43	□□□□□ -2.02
PSMC6-208	ENST00000554956		A0A1W2PNM2	257 aa		2.42	□□□□□ -2.02
PSMC6-208	ENST00000554956	C20orf202	A1L168	122 aa		2.42	□□□□□ -2.02
PSMC6-208	ENST00000554956		F8WEM9	126 aa		2.42	□□□□□ -2.02
PSMC6-208	ENST00000554956	NHP2	Q9NX24	153 aa	Known RBP	2.42	□□□□□ -2.02
PSMC6-208	ENST00000554956	SS18L2	Q9UHA2	77 aa		2.42	□□□□□ -2.02
PSMC6-208	ENST00000554956		M0R143	59 aa		2.41	□□□□□ -2.02
PSMC6-208	ENST00000554956	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	2.41	□□□□□ -2.02
PSMC6-208	ENST00000554956		A0A1B0GV72	72 aa		2.4	□□□□□ -2.03
PSMC6-208	ENST00000554956	COPS9	Q8WXC6	57 aa		2.4	□□□□□ -2.03
PSMC6-208	ENST00000554956	SNHG12	Q9BXW3	62 aa		2.4	□□□□□ -2.03
PSMC6-208	ENST00000554956		A0A087WSZ3	146 aa		2.39	□□□□□ -2.03
PSMC6-208	ENST00000554956		H3BT86	120 aa		2.39	□□□□□ -2.03
PSMC6-208	ENST00000554956	HIST1H4A	P62805	103 aa	Known RBP	2.39	□□□□□ -2.03
PSMC6-208	ENST00000554956	HIST3H2BB	Q8N257	126 aa		2.39	□□□□□ -2.03
PSMC6-208	ENST00000554956	TRBV20-1	A0A075B6N2	111 aa		2.38	□□□□□ -2.03
PSMC6-208	ENST00000554956	KRTAP19-6	Q3LI70	58 aa		2.37	□□□□□ -2.03
PSMC6-208	ENST00000554956	TEN1	Q86WV5	123 aa		2.37	□□□□□ -2.03
PSMC6-208	ENST00000554956	PPDPFL	Q8WWR9	84 aa		2.37	□□□□□ -2.03
PSMC6-208	ENST00000554956	HIST1H2BL	Q99880	126 aa		2.37	□□□□□ -2.03
PSMC6-208	ENST00000554956		H3BMG7	143 aa		2.36	□□□□□ -2.03
PSMC6-208	ENST00000554956	BVES-AS1	Q5T3Y7	98 aa		2.36	□□□□□ -2.03
PSMC6-208	ENST00000554956	MUC19	Q7Z5P9	8384 aa		2.36	□□□□□ -2.03
PSMC6-208	ENST00000554956	COL5A1-AS1	Q5SY13	56 aa		2.35	□□□□□ -2.03

Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms