RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CCKP06307 115 aa6.64□□□□□ -1.35
SYNE2-214ENST00000554928 SS18L2Q9UHA2 77 aa6.64□□□□□ -1.35
SYNE2-214ENST00000554928 RBM3P98179 157 aaKnown RBP6.62□□□□□ -1.35
SYNE2-214ENST00000554928 OBSCN-AS1Q96MR7 158 aa6.62□□□□□ -1.35
SYNE2-214ENST00000554928 VPS25Q9BRG1 176 aa6.62□□□□□ -1.35
SYNE2-214ENST00000554928 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
SYNE2-214ENST00000554928 A0A1W2PPM0 123 aa6.61□□□□□ -1.35
SYNE2-214ENST00000554928 C9JAW5 83 aa6.61□□□□□ -1.35
SYNE2-214ENST00000554928 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
SYNE2-214ENST00000554928 DEFB116Q30KQ4 102 aa6.61□□□□□ -1.35
SYNE2-214ENST00000554928 MTURNQ8N3F0 131 aa6.61□□□□□ -1.35
SYNE2-214ENST00000554928 TRBV20-1A0A075B6N2 111 aa6.59□□□□□ -1.35
SYNE2-214ENST00000554928 LYRM7Q5U5X0 104 aa6.59□□□□□ -1.35
SYNE2-214ENST00000554928 DSCR8Q96T75 97 aa6.59□□□□□ -1.35
SYNE2-214ENST00000554928 LINC00472Q9H8W2 130 aa6.59□□□□□ -1.35
SYNE2-214ENST00000554928 SIGMAR1Q99720 223 aa6.58□□□□□ -1.36
SYNE2-214ENST00000554928 IGKV4-1P06312 121 aa6.57□□□□□ -1.36
SYNE2-214ENST00000554928 DSCR10P59022 87 aa6.57□□□□□ -1.36
SYNE2-214ENST00000554928 Q6ZQT0 140 aa6.57□□□□□ -1.36
SYNE2-214ENST00000554928 NOTCH2NLQ7Z3S9 236 aa6.56□□□□□ -1.36
SYNE2-214ENST00000554928 C14orf132Q9NPU4 83 aa6.56□□□□□ -1.36
SYNE2-214ENST00000554928 GTF2H5Q6ZYL4 71 aa6.55□□□□□ -1.36
SYNE2-214ENST00000554928 LOC110117498A0A087WWA1 95 aa6.54□□□□□ -1.36
SYNE2-214ENST00000554928 A0A0U1RQV1 116 aa6.54□□□□□ -1.36
SYNE2-214ENST00000554928 JMJD7-PLA2G4BH0Y9G9 81 aa6.54□□□□□ -1.36
SYNE2-214ENST00000554928 KRTAP19-2Q3LHN2 52 aa6.54□□□□□ -1.36
SYNE2-214ENST00000554928 Q75L30 129 aa6.53□□□□□ -1.36
SYNE2-214ENST00000554928 SPCS1Q9Y6A9 102 aa6.53□□□□□ -1.36
SYNE2-214ENST00000554928 KRTAP16-1A8MUX0 517 aa6.51□□□□□ -1.37
SYNE2-214ENST00000554928 H3BT86 120 aa6.51□□□□□ -1.37
SYNE2-214ENST00000554928 C20orf166-AS1Q96NR2 134 aa6.51□□□□□ -1.37
SYNE2-214ENST00000554928 A8MUU9 505 aa6.5□□□□□ -1.37
SYNE2-214ENST00000554928 IGHV6-1A0A0B4J1U7 121 aa6.49□□□□□ -1.37
SYNE2-214ENST00000554928 K7EP34 96 aa6.48□□□□□ -1.37
SYNE2-214ENST00000554928 K7ERU9 68 aa6.47□□□□□ -1.37
SYNE2-214ENST00000554928 LINC00313P59037 77 aa6.47□□□□□ -1.37
SYNE2-214ENST00000554928 PRO0461Q9UI25 63 aa6.47□□□□□ -1.37
SYNE2-214ENST00000554928 A0A1B0GVX0 72 aa6.46□□□□□ -1.38
SYNE2-214ENST00000554928 PDE6GP18545 87 aa6.46□□□□□ -1.38
SYNE2-214ENST00000554928 ATP11AUNQ6ZP68 121 aa6.45□□□□□ -1.38
SYNE2-214ENST00000554928 PCP4P48539 62 aa6.44□□□□□ -1.38
SYNE2-214ENST00000554928 A0A1B0GW54 56 aa6.42□□□□□ -1.38
SYNE2-214ENST00000554928 C21orf62-AS1Q17RA5 79 aa6.42□□□□□ -1.38
SYNE2-214ENST00000554928 IGKV3D-7A0A0C4DH55 119 aa6.41□□□□□ -1.38
SYNE2-214ENST00000554928 J3KT08 172 aa6.41□□□□□ -1.38
SYNE2-214ENST00000554928 C8orf87E5RJ46 101 aa6.4□□□□□ -1.38
SYNE2-214ENST00000554928 MT1HP80294 61 aa6.4□□□□□ -1.38
SYNE2-214ENST00000554928 A8MWP4 228 aa6.39□□□□□ -1.39
SYNE2-214ENST00000554928 NREPQ16612 68 aa6.39□□□□□ -1.39
SYNE2-214ENST00000554928 C8orf17Q9NRJ1 99 aa6.38□□□□□ -1.39
SYNE2-214ENST00000554928 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-214ENST00000554928 F8W1H4 67 aa6.37□□□□□ -1.39
SYNE2-214ENST00000554928 J3QR89 54 aa6.37□□□□□ -1.39
SYNE2-214ENST00000554928 NDUFB1O75438 58 aa6.35□□□□□ -1.39
SYNE2-214ENST00000554928 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
SYNE2-214ENST00000554928 Q6ZVQ6 151 aa6.34□□□□□ -1.39
SYNE2-214ENST00000554928 K7EQZ3 153 aa6.33□□□□□ -1.4
SYNE2-214ENST00000554928 MMP24-AS1A0A0U1RRL7 71 aa6.32□□□□□ -1.4
SYNE2-214ENST00000554928 COX6B2Q6YFQ2 88 aa6.32□□□□□ -1.4
SYNE2-214ENST00000554928 Q8N9P0 234 aaPredicted RBP6.32□□□□□ -1.4
SYNE2-214ENST00000554928 Q8N9L7 120 aa6.31□□□□□ -1.4
SYNE2-214ENST00000554928 LINC00846Q9NV44 126 aa6.31□□□□□ -1.4
SYNE2-214ENST00000554928 ETDBQ3ZM63 59 aa6.3□□□□□ -1.4
SYNE2-214ENST00000554928 ZCCHC13Q8WW36 166 aaKnown RBP6.3□□□□□ -1.4
SYNE2-214ENST00000554928 BPY2O14599 106 aa6.29□□□□□ -1.4
SYNE2-214ENST00000554928 HRES1P13985 223 aa6.28□□□□□ -1.4
SYNE2-214ENST00000554928 TMEM254Q8TBM7 123 aa6.26□□□□□ -1.41
SYNE2-214ENST00000554928 SCGB1A1P11684 91 aa6.25□□□□□ -1.41
SYNE2-214ENST00000554928 MRPL34Q9BQ48 92 aaKnown RBP6.25□□□□□ -1.41
SYNE2-214ENST00000554928 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
SYNE2-214ENST00000554928 KRTAP10-6P60371 365 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-214ENST00000554928 MPLKIPQ8TAP9 179 aa6.24□□□□□ -1.41
SYNE2-214ENST00000554928 WFDC13Q8IUB5 93 aa6.23□□□□□ -1.41
SYNE2-214ENST00000554928 SPINK7P58062 85 aa6.22□□□□□ -1.41
SYNE2-214ENST00000554928 UBL5Q9BZL1 73 aa6.22□□□□□ -1.41
SYNE2-214ENST00000554928 M0R2T5 61 aa6.21□□□□□ -1.42
SYNE2-214ENST00000554928 NDUFS5O43920 106 aa6.19□□□□□ -1.42
SYNE2-214ENST00000554928 Q5W150 140 aa6.18□□□□□ -1.42
SYNE2-214ENST00000554928 CASC2Q6XLA1 102 aa6.18□□□□□ -1.42
SYNE2-214ENST00000554928 FAM236DA0A1B0GTK5 79 aa6.16□□□□□ -1.42
SYNE2-214ENST00000554928 FAM236CP0DP71 79 aa6.16□□□□□ -1.42
SYNE2-214ENST00000554928 HCG22E2RYF7 251 aa6.15□□□□□ -1.42
SYNE2-214ENST00000554928 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
SYNE2-214ENST00000554928 CXCL6P80162 114 aa6.1□□□□□ -1.43
SYNE2-214ENST00000554928 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
SYNE2-214ENST00000554928 IGKV2D-30A0A075B6S6 120 aa6.09□□□□□ -1.43
SYNE2-214ENST00000554928 MT-ATP8P03928 68 aa6.09□□□□□ -1.43
SYNE2-214ENST00000554928 IGKV2-30P06310 120 aa6.09□□□□□ -1.43
SYNE2-214ENST00000554928 SVIPQ8NHG7 77 aa6.08□□□□□ -1.44
SYNE2-214ENST00000554928 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
SYNE2-214ENST00000554928 FAM240AA0A1B0GVK7 77 aa6.07□□□□□ -1.44
SYNE2-214ENST00000554928 ACYP1P07311 99 aa6.06□□□□□ -1.44
SYNE2-214ENST00000554928 KRTAP5-3Q6L8H2 238 aa6.05□□□□□ -1.44
SYNE2-214ENST00000554928 C7orf65Q6ZTY9 151 aa6.04□□□□□ -1.44
SYNE2-214ENST00000554928 MT2AP02795 61 aa6.02□□□□□ -1.45
SYNE2-214ENST00000554928 ANAPC13Q9BS18 74 aa6.02□□□□□ -1.45
SYNE2-214ENST00000554928 FSIP2Q5CZC0 6907 aa6□□□□□ -1.45
SYNE2-214ENST00000554928 A0A087WVE0 104 aa5.98□□□□□ -1.45
SYNE2-214ENST00000554928 MT1FP04733 61 aa5.98□□□□□ -1.45
SYNE2-214ENST00000554928 HIST1H4AP62805 103 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms