RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 ST20-AS1Q8NBB2 130 aa6.88□□□□□ -1.31
VPS33B-204ENST00000554660 PSORS1C2Q9UIG4 136 aa6.88□□□□□ -1.31
VPS33B-204ENST00000554660 A0A1W2PNN7 141 aa6.87□□□□□ -1.31
VPS33B-204ENST00000554660 Q5XG85 94 aa6.87□□□□□ -1.31
VPS33B-204ENST00000554660 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
VPS33B-204ENST00000554660 DSCR10P59022 87 aa6.86□□□□□ -1.31
VPS33B-204ENST00000554660 Q8N9L7 120 aa6.85□□□□□ -1.31
VPS33B-204ENST00000554660 IGFL1Q6UW32 110 aa6.84□□□□□ -1.31
VPS33B-204ENST00000554660 PHF5AQ7RTV0 110 aaKnown RBP6.84□□□□□ -1.31
VPS33B-204ENST00000554660 HCG22E2RYF7 251 aa6.83□□□□□ -1.32
VPS33B-204ENST00000554660 PRR4Q16378 134 aa6.82□□□□□ -1.32
VPS33B-204ENST00000554660 ZCCHC13Q8WW36 166 aaKnown RBP6.82□□□□□ -1.32
VPS33B-204ENST00000554660 IGLV7-43P04211 117 aa6.81□□□□□ -1.32
VPS33B-204ENST00000554660 H3BPC8 53 aa6.8□□□□□ -1.32
VPS33B-204ENST00000554660 KRTAP11-1Q8IUC1 163 aa6.8□□□□□ -1.32
VPS33B-204ENST00000554660 K7EQZ3 153 aa6.79□□□□□ -1.32
VPS33B-204ENST00000554660 NDUFB1O75438 58 aa6.79□□□□□ -1.32
VPS33B-204ENST00000554660 UBE2AP49459 152 aa6.79□□□□□ -1.32
VPS33B-204ENST00000554660 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
VPS33B-204ENST00000554660 KRTAP1-4P0C5Y4 121 aa6.78□□□□□ -1.32
VPS33B-204ENST00000554660 PRLHP81277 87 aa6.77□□□□□ -1.33
VPS33B-204ENST00000554660 HIGD2AQ9BW72 106 aa6.77□□□□□ -1.33
VPS33B-204ENST00000554660 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
VPS33B-204ENST00000554660 KRTAP13-1Q8IUC0 172 aa6.76□□□□□ -1.33
VPS33B-204ENST00000554660 CYP4F30PQ9H0H9 118 aa6.76□□□□□ -1.33
VPS33B-204ENST00000554660 A0A087WSZ3 146 aa6.75□□□□□ -1.33
VPS33B-204ENST00000554660 C4orf26Q17RF5 130 aa6.75□□□□□ -1.33
VPS33B-204ENST00000554660 A8MWP4 228 aa6.74□□□□□ -1.33
VPS33B-204ENST00000554660 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
VPS33B-204ENST00000554660 MP68P56378 58 aa6.73□□□□□ -1.33
VPS33B-204ENST00000554660 PRR15Q8IV56 129 aa6.73□□□□□ -1.33
VPS33B-204ENST00000554660 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
VPS33B-204ENST00000554660 HRCT1Q6UXD1 115 aa6.72□□□□□ -1.33
VPS33B-204ENST00000554660 ZNF706Q9Y5V0 76 aaPredicted RBP6.72□□□□□ -1.33
VPS33B-204ENST00000554660 hDV103S1A0JD37 113 aa6.71□□□□□ -1.34
VPS33B-204ENST00000554660 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
VPS33B-204ENST00000554660 SPANXA2-OT1Q8N9U9 137 aa6.71□□□□□ -1.34
VPS33B-204ENST00000554660 CASC2Q6XLA1 102 aa6.68□□□□□ -1.34
VPS33B-204ENST00000554660 MUC17Q685J3 4493 aa6.68□□□□□ -1.34
VPS33B-204ENST00000554660 TRAV22A0A0B4J277 110 aa6.67□□□□□ -1.34
VPS33B-204ENST00000554660 MOBPQ13875 183 aa6.66□□□□□ -1.34
VPS33B-204ENST00000554660 PRO0628Q9UI54 55 aa6.66□□□□□ -1.34
VPS33B-204ENST00000554660 ASB16-AS1Q495Z4 193 aa6.65□□□□□ -1.34
VPS33B-204ENST00000554660 TP53AIP1Q9HCN2 124 aa6.65□□□□□ -1.34
VPS33B-204ENST00000554660 FSIP2Q5CZC0 6907 aa6.65□□□□□ -1.35
VPS33B-204ENST00000554660 A0A087X002 238 aa6.64□□□□□ -1.35
VPS33B-204ENST00000554660 Q1T7F1 81 aa6.64□□□□□ -1.35
VPS33B-204ENST00000554660 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
VPS33B-204ENST00000554660 MMP24-AS1A0A0U1RRL7 71 aa6.63□□□□□ -1.35
VPS33B-204ENST00000554660 ZNF861PO60384 105 aa6.63□□□□□ -1.35
VPS33B-204ENST00000554660 RETNLBQ9BQ08 111 aa6.63□□□□□ -1.35
VPS33B-204ENST00000554660 V9GYY9 64 aa6.63□□□□□ -1.35
VPS33B-204ENST00000554660 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
VPS33B-204ENST00000554660 H0Y9P7 68 aa6.62□□□□□ -1.35
VPS33B-204ENST00000554660 C1orf64Q8NEQ6 169 aa6.62□□□□□ -1.35
VPS33B-204ENST00000554660 FAM229BQ4G0N7 80 aa6.6□□□□□ -1.35
VPS33B-204ENST00000554660 TYMSOSQ8TAI1 123 aa6.6□□□□□ -1.35
VPS33B-204ENST00000554660 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
VPS33B-204ENST00000554660 Q96NJ1 140 aa6.6□□□□□ -1.35
VPS33B-204ENST00000554660 DEFB116Q30KQ4 102 aa6.59□□□□□ -1.35
VPS33B-204ENST00000554660 ANAPC11Q9NYG5 84 aa6.58□□□□□ -1.36
VPS33B-204ENST00000554660 CD164Q04900 197 aa6.57□□□□□ -1.36
VPS33B-204ENST00000554660 C4orf48Q5BLP8 95 aa6.57□□□□□ -1.36
VPS33B-204ENST00000554660 C1orf195Q5TG92 126 aa6.57□□□□□ -1.36
VPS33B-204ENST00000554660 KRTAP13-2Q52LG2 175 aa6.56□□□□□ -1.36
VPS33B-204ENST00000554660 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
VPS33B-204ENST00000554660 TPRXLQ17RH7 258 aa6.55□□□□□ -1.36
VPS33B-204ENST00000554660 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
VPS33B-204ENST00000554660 IGLV7-46A0A075B6I9 117 aa6.54□□□□□ -1.36
VPS33B-204ENST00000554660 LINC00304Q8N9R0 145 aa6.53□□□□□ -1.36
VPS33B-204ENST00000554660 MPLKIPQ8TAP9 179 aa6.53□□□□□ -1.36
VPS33B-204ENST00000554660 IGLV9-49A0A0B4J1Y8 123 aa6.52□□□□□ -1.37
VPS33B-204ENST00000554660 SSBP3-AS1Q7Z2R9 100 aa6.5□□□□□ -1.37
VPS33B-204ENST00000554660 MRPL34Q9BQ48 92 aaKnown RBP6.5□□□□□ -1.37
VPS33B-204ENST00000554660 LIMD2Q9BT23 127 aa6.5□□□□□ -1.37
VPS33B-204ENST00000554660 LCE2BO14633 110 aa6.49□□□□□ -1.37
VPS33B-204ENST00000554660 C8orf87E5RJ46 101 aa6.48□□□□□ -1.37
VPS33B-204ENST00000554660 BRK1Q8WUW1 75 aa6.47□□□□□ -1.37
VPS33B-204ENST00000554660 CRCT1Q9UGL9 99 aa6.47□□□□□ -1.37
VPS33B-204ENST00000554660 LOC101927531A0A1B0GV80 90 aa6.46□□□□□ -1.38
VPS33B-204ENST00000554660 IGHV6-1A0A0B4J1U7 121 aa6.43□□□□□ -1.38
VPS33B-204ENST00000554660 Q8N9P0 234 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-204ENST00000554660 COA5Q86WW8 74 aa6.42□□□□□ -1.38
VPS33B-204ENST00000554660 KRTAP4-1Q9BYQ7 146 aa6.42□□□□□ -1.38
VPS33B-204ENST00000554660 KRTAP13-3Q3SY46 172 aa6.39□□□□□ -1.39
VPS33B-204ENST00000554660 NDUFS5O43920 106 aa6.38□□□□□ -1.39
VPS33B-204ENST00000554660 Q5VV11 94 aa6.38□□□□□ -1.39
VPS33B-204ENST00000554660 Q75L30 129 aa6.38□□□□□ -1.39
VPS33B-204ENST00000554660 A8MUN3 132 aa6.36□□□□□ -1.39
VPS33B-204ENST00000554660 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
VPS33B-204ENST00000554660 PSPHP1O15172 72 aa6.35□□□□□ -1.39
VPS33B-204ENST00000554660 SPAG11AQ6PDA7 123 aa6.35□□□□□ -1.39
VPS33B-204ENST00000554660 PCOTHQ58A44 107 aa6.34□□□□□ -1.39
VPS33B-204ENST00000554660 SEC61BP60468 96 aaKnown RBP6.33□□□□□ -1.4
VPS33B-204ENST00000554660 NOTCH2NLQ7Z3S9 236 aa6.32□□□□□ -1.4
VPS33B-204ENST00000554660 PRR15LQ9BU68 103 aa6.31□□□□□ -1.4
VPS33B-204ENST00000554660 HRES1P13985 223 aa6.3□□□□□ -1.4
VPS33B-204ENST00000554660 LINC00313P59037 77 aa6.3□□□□□ -1.4
VPS33B-204ENST00000554660 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
VPS33B-204ENST00000554660 ACYP2P14621 99 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms