RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 HUWE1Q7Z6Z7 4374 aaKnown RBP1.59□□□□□ -2.16
PRPF39-207ENST00000554439 A0A096LNI7 61 aa1.59□□□□□ -2.16
PRPF39-207ENST00000554439 IGKV2-24A0A0C4DH68 120 aa1.59□□□□□ -2.16
PRPF39-207ENST00000554439 TLX1NBP0CAT3 122 aa1.59□□□□□ -2.16
PRPF39-207ENST00000554439 KRTAP11-1Q8IUC1 163 aa1.59□□□□□ -2.16
PRPF39-207ENST00000554439 A0A1B0GW54 56 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 H0Y9P7 68 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 H3BNG1 76 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 CHKB-CPT1BH3BT56 60 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 CNBPP62633 177 aaKnown RBP1.58□□□□□ -2.16
PRPF39-207ENST00000554439 LINC00588Q9Y4M8 146 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 IGKV2D-30A0A075B6S6 120 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 C16orf90A8MZG2 172 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 DNAH10OSP0CZ25 163 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 MP68P56378 58 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 CASC2Q6XLA1 102 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 PRR15LQ9BU68 103 aa1.58□□□□□ -2.16
PRPF39-207ENST00000554439 NDUFB1O75438 58 aa1.57□□□□□ -2.16
PRPF39-207ENST00000554439 SPTSSBQ8NFR3 76 aa1.57□□□□□ -2.16
PRPF39-207ENST00000554439 J3QKU1 62 aa1.57□□□□□ -2.16
PRPF39-207ENST00000554439 CHTF8P0CG12 524 aa1.57□□□□□ -2.16
PRPF39-207ENST00000554439 UBE2AP49459 152 aa1.57□□□□□ -2.16
PRPF39-207ENST00000554439 PCOTHQ58A44 107 aa1.57□□□□□ -2.16
PRPF39-207ENST00000554439 LCA10Q71F78 164 aa1.57□□□□□ -2.16
PRPF39-207ENST00000554439 KRTAP2-2Q9BYT5 123 aa1.57□□□□□ -2.16
PRPF39-207ENST00000554439 IGLV7-46A0A075B6I9 117 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 H0Y9J4 135 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 PHF5AQ7RTV0 110 aaKnown RBP1.56□□□□□ -2.16
PRPF39-207ENST00000554439 C9orf163Q8N9P6 203 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 COA5Q86WW8 74 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 IGLV8-61A0A075B6I0 122 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 A6NED7 52 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 A8MWP4 228 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 SPAG11AQ6PDA7 123 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 SPANXA2-OT1Q8N9U9 137 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 STAB2Q8WWQ8 2551 aa1.56□□□□□ -2.16
PRPF39-207ENST00000554439 MMP24-AS1A0A0U1RRL7 71 aa1.55□□□□□ -2.16
PRPF39-207ENST00000554439 CD164Q04900 197 aa1.55□□□□□ -2.16
PRPF39-207ENST00000554439 LIMD2Q9BT23 127 aa1.55□□□□□ -2.16
PRPF39-207ENST00000554439 HECTD4Q9Y4D8 3996 aa1.54□□□□□ -2.16
PRPF39-207ENST00000554439 PANO1I0J062 215 aa1.54□□□□□ -2.16
PRPF39-207ENST00000554439 KMT2AQ03164 3969 aa1.54□□□□□ -2.16
PRPF39-207ENST00000554439 K7EIL1 84 aa1.54□□□□□ -2.16
PRPF39-207ENST00000554439 NDUFS5O43920 106 aa1.54□□□□□ -2.16
PRPF39-207ENST00000554439 SPINK7P58062 85 aa1.54□□□□□ -2.16
PRPF39-207ENST00000554439 KTN1-AS1Q86SY8 53 aa1.54□□□□□ -2.16
PRPF39-207ENST00000554439 Q96NJ1 140 aa1.54□□□□□ -2.16
PRPF39-207ENST00000554439 RBM12B-AS1Q9P1G2 102 aa1.54□□□□□ -2.16
PRPF39-207ENST00000554439 DNAH8Q96JB1 4490 aa1.54□□□□□ -2.16
PRPF39-207ENST00000554439 PLECQ15149 4684 aaKnown RBP1.54□□□□□ -2.16
PRPF39-207ENST00000554439 LOC101927531A0A1B0GV80 90 aa1.53□□□□□ -2.16
PRPF39-207ENST00000554439 A6NN06 94 aa1.53□□□□□ -2.16
PRPF39-207ENST00000554439 H3BPC8 53 aa1.53□□□□□ -2.16
PRPF39-207ENST00000554439 ANAPC11Q9NYG5 84 aa1.53□□□□□ -2.16
PRPF39-207ENST00000554439 MGAM2Q2M2H8 2515 aa1.53□□□□□ -2.16
PRPF39-207ENST00000554439 IGHV6-1A0A0B4J1U7 121 aa1.53□□□□□ -2.16
PRPF39-207ENST00000554439 HRES1P13985 223 aa1.53□□□□□ -2.16
PRPF39-207ENST00000554439 MOBPQ13875 183 aa1.53□□□□□ -2.16
PRPF39-207ENST00000554439 ATP11AUNQ6ZP68 121 aa1.53□□□□□ -2.16
PRPF39-207ENST00000554439 ALMS1Q8TCU4 4167 aa1.53□□□□□ -2.16
PRPF39-207ENST00000554439 SPRR1BP22528 89 aa1.53□□□□□ -2.17
PRPF39-207ENST00000554439 CDC42SE1Q9NRR8 79 aa1.53□□□□□ -2.17
PRPF39-207ENST00000554439 C8orf17Q9NRJ1 99 aa1.52□□□□□ -2.17
PRPF39-207ENST00000554439 PLAC8Q9NZF1 115 aa1.52□□□□□ -2.17
PRPF39-207ENST00000554439 LINC01558Q9Y6Z2 57 aa1.52□□□□□ -2.17
PRPF39-207ENST00000554439 DNAH17Q9UFH2 4485 aa1.52□□□□□ -2.17
PRPF39-207ENST00000554439 KRTAP16-1A8MUX0 517 aa1.52□□□□□ -2.17
PRPF39-207ENST00000554439 ASB16-AS1Q495Z4 193 aa1.52□□□□□ -2.17
PRPF39-207ENST00000554439 VPS13DQ5THJ4 4388 aa1.52□□□□□ -2.17
PRPF39-207ENST00000554439 DNAH6Q9C0G6 4158 aa1.51□□□□□ -2.17
PRPF39-207ENST00000554439 Q6ZR54 194 aa1.51□□□□□ -2.17
PRPF39-207ENST00000554439 KRTAP13-1Q8IUC0 172 aa1.51□□□□□ -2.17
PRPF39-207ENST00000554439 A0A1B0GVX0 72 aa1.51□□□□□ -2.17
PRPF39-207ENST00000554439 Q5W150 140 aa1.51□□□□□ -2.17
PRPF39-207ENST00000554439 ADM2Q7Z4H4 148 aa1.51□□□□□ -2.17
PRPF39-207ENST00000554439 DYNC2H1Q8NCM8 4307 aaKnown RBP1.51□□□□□ -2.17
PRPF39-207ENST00000554439 STARD9Q9P2P6 4700 aa1.51□□□□□ -2.17
PRPF39-207ENST00000554439 DNAH2Q9P225 4427 aa1.51□□□□□ -2.17
PRPF39-207ENST00000554439 SPINK6Q6UWN8 80 aa1.5□□□□□ -2.17
PRPF39-207ENST00000554439 C7orf65Q6ZTY9 151 aa1.5□□□□□ -2.17
PRPF39-207ENST00000554439 UBE2DNLQ8IWF7 75 aa1.5□□□□□ -2.17
PRPF39-207ENST00000554439 TP53AIP1Q9HCN2 124 aa1.5□□□□□ -2.17
PRPF39-207ENST00000554439 RETNLBQ9BQ08 111 aa1.5□□□□□ -2.17
PRPF39-207ENST00000554439 MRPL34Q9BQ48 92 aaKnown RBP1.5□□□□□ -2.17
PRPF39-207ENST00000554439 NDUFAF8A1L188 74 aa1.5□□□□□ -2.17
PRPF39-207ENST00000554439 LINC00313P59037 77 aa1.5□□□□□ -2.17
PRPF39-207ENST00000554439 MEGF8Q7Z7M0 2845 aa1.49□□□□□ -2.17
PRPF39-207ENST00000554439 FBN3Q75N90 2809 aa1.49□□□□□ -2.17
PRPF39-207ENST00000554439 TGP01266 2768 aa1.49□□□□□ -2.17
PRPF39-207ENST00000554439 DNAH11Q96DT5 4516 aa1.49□□□□□ -2.17
PRPF39-207ENST00000554439 PRKDCP78527 4128 aaKnown RBP1.49□□□□□ -2.17
PRPF39-207ENST00000554439 KRTAP13-3Q3SY46 172 aa1.49□□□□□ -2.17
PRPF39-207ENST00000554439 PSORS1C2Q9UIG4 136 aa1.49□□□□□ -2.17
PRPF39-207ENST00000554439 APLNQ9ULZ1 77 aa1.49□□□□□ -2.17
PRPF39-207ENST00000554439 C14orf177Q52M58 125 aa1.48□□□□□ -2.17
PRPF39-207ENST00000554439 LINC00483Q53H64 154 aa1.48□□□□□ -2.17
PRPF39-207ENST00000554439 SPACA4Q8TDM5 124 aa1.48□□□□□ -2.17
PRPF39-207ENST00000554439 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
PRPF39-207ENST00000554439 Q6ZRN7 208 aaPredicted RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms