RNA–Protein interactions for RNA: ENST00000553716.5

PGF-203, Transcript of placental growth factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGF, Length 1,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-203ENST00000553716 PRR26Q8N8Z3 221 aa13.28□□□□□ -0.28
PGF-203ENST00000553716 H7BZZ5 65 aa13.27□□□□□ -0.29
PGF-203ENST00000553716 HSPG2P98160 4391 aa13.25□□□□□ -0.29
PGF-203ENST00000553716 NOTCH2NLQ7Z3S9 236 aa13.25□□□□□ -0.29
PGF-203ENST00000553716 TMEM258P61165 79 aa13.24□□□□□ -0.29
PGF-203ENST00000553716 C5orf47Q569G3 176 aa13.24□□□□□ -0.29
PGF-203ENST00000553716 LIMD2Q9BT23 127 aa13.24□□□□□ -0.29
PGF-203ENST00000553716 SPINK1P00995 79 aa13.23□□□□□ -0.29
PGF-203ENST00000553716 ZCCHC13Q8WW36 166 aaKnown RBP13.21□□□□□ -0.3
PGF-203ENST00000553716 NDUFC1O43677 76 aa13.2□□□□□ -0.3
PGF-203ENST00000553716 C4orf48Q5BLP8 95 aa13.2□□□□□ -0.3
PGF-203ENST00000553716 RPS29P62273 56 aaKnown RBP13.18□□□□□ -0.3
PGF-203ENST00000553716 LINC00304Q8N9R0 145 aa13.17□□□□□ -0.3
PGF-203ENST00000553716 RYR1P21817 5038 aa13.16□□□□□ -0.3
PGF-203ENST00000553716 SPAG11AQ6PDA7 123 aa13.16□□□□□ -0.3
PGF-203ENST00000553716 MRPL34Q9BQ48 92 aaKnown RBP13.15□□□□□ -0.3
PGF-203ENST00000553716 C8orf87E5RJ46 101 aa13.15□□□□□ -0.31
PGF-203ENST00000553716 FAM229AH3BQW9 127 aa13.13□□□□□ -0.31
PGF-203ENST00000553716 TP53AIP1Q9HCN2 124 aa13.12□□□□□ -0.31
PGF-203ENST00000553716 H0Y9P7 68 aa13.08□□□□□ -0.32
PGF-203ENST00000553716 MP68P56378 58 aa13.08□□□□□ -0.32
PGF-203ENST00000553716 H3BPC8 53 aa13.07□□□□□ -0.32
PGF-203ENST00000553716 Q5VSD8 79 aa13.05□□□□□ -0.32
PGF-203ENST00000553716 KRTAP17-1Q9BYP8 105 aa13.05□□□□□ -0.32
PGF-203ENST00000553716 LINC00313P59037 77 aa13.05□□□□□ -0.32
PGF-203ENST00000553716 TRAV22A0A0B4J277 110 aa13.04□□□□□ -0.32
PGF-203ENST00000553716 FAM236DA0A1B0GTK5 79 aa13.04□□□□□ -0.32
PGF-203ENST00000553716 FAM236CP0DP71 79 aa13.04□□□□□ -0.32
PGF-203ENST00000553716 LINC00208Q96KT6 92 aa13.02□□□□□ -0.33
PGF-203ENST00000553716 KRTAP16-1A8MUX0 517 aa13.01□□□□□ -0.33
PGF-203ENST00000553716 NDUFS5O43920 106 aa12.99□□□□□ -0.33
PGF-203ENST00000553716 Q8N9P0 234 aaPredicted RBP12.99□□□□□ -0.33
PGF-203ENST00000553716 RPS28P62857 69 aaKnown RBP12.98□□□□□ -0.33
PGF-203ENST00000553716 KRTAP13-3Q3SY46 172 aa12.96□□□□□ -0.33
PGF-203ENST00000553716 TNXBP22105 4242 aa12.96□□□□□ -0.33
PGF-203ENST00000553716 KIAA1109Q2LD37 5005 aa12.96□□□□□ -0.33
PGF-203ENST00000553716 ATP5EP56381 51 aaPredicted RBP12.96□□□□□ -0.34
PGF-203ENST00000553716 C1orf64Q8NEQ6 169 aa12.96□□□□□ -0.34
PGF-203ENST00000553716 KRTAP10-8P60410 259 aa12.94□□□□□ -0.34
PGF-203ENST00000553716 LRP1Q07954 4544 aaKnown RBP12.93□□□□□ -0.34
PGF-203ENST00000553716 EPPK1P58107 5090 aaKnown RBP12.93□□□□□ -0.34
PGF-203ENST00000553716 Q5W150 140 aa12.91□□□□□ -0.34
PGF-203ENST00000553716 FAT3Q8TDW7 4589 aa12.89□□□□□ -0.35
PGF-203ENST00000553716 FLG2Q5D862 2391 aaPredicted RBP12.88□□□□□ -0.35
PGF-203ENST00000553716 OXTP01178 125 aa12.86□□□□□ -0.35
PGF-203ENST00000553716 Q8N1X5 172 aa12.86□□□□□ -0.35
PGF-203ENST00000553716 SERP1Q9Y6X1 66 aa12.84□□□□□ -0.35
PGF-203ENST00000553716 SPANXA2-OT1Q8N9U9 137 aa12.8□□□□□ -0.36
PGF-203ENST00000553716 CYP4F30PQ9H0H9 118 aa12.79□□□□□ -0.36
PGF-203ENST00000553716 LOC101927531A0A1B0GV80 90 aa12.76□□□□□ -0.37
PGF-203ENST00000553716 RETNLBQ9BQ08 111 aa12.73□□□□□ -0.37
PGF-203ENST00000553716 MT1HL1P0DM35 61 aa12.7□□□□□ -0.38
PGF-203ENST00000553716 IGLV7-46A0A075B6I9 117 aa12.69□□□□□ -0.38
PGF-203ENST00000553716 PCOTHQ58A44 107 aa12.69□□□□□ -0.38
PGF-203ENST00000553716 PRR4Q16378 134 aa12.67□□□□□ -0.38
PGF-203ENST00000553716 C20orf166-AS1Q96NR2 134 aa12.65□□□□□ -0.38
PGF-203ENST00000553716 MYCBP2O75592 4640 aa12.65□□□□□ -0.39
PGF-203ENST00000553716 IGKV2-30P06310 120 aa12.64□□□□□ -0.39
PGF-203ENST00000553716 A8MUU9 505 aa12.64□□□□□ -0.39
PGF-203ENST00000553716 C9orf92A6NGG3 77 aa12.63□□□□□ -0.39
PGF-203ENST00000553716 DMBT1Q9UGM3 2413 aaPredicted RBP12.59□□□□□ -0.39
PGF-203ENST00000553716 FP248Q71RG6 208 aaPredicted RBP12.57□□□□□ -0.4
PGF-203ENST00000553716 KRTAP4-5Q9BYR2 181 aa12.54□□□□□ -0.4
PGF-203ENST00000553716 SMIM26A0A096LP01 95 aa12.54□□□□□ -0.4
PGF-203ENST00000553716 HRES1P13985 223 aa12.49□□□□□ -0.41
PGF-203ENST00000553716 Q75L30 129 aa12.48□□□□□ -0.41
PGF-203ENST00000553716 IGKV2D-30A0A075B6S6 120 aa12.45□□□□□ -0.42
PGF-203ENST00000553716 COA5Q86WW8 74 aa12.4□□□□□ -0.42
PGF-203ENST00000553716 C7orf65Q6ZTY9 151 aa12.39□□□□□ -0.43
PGF-203ENST00000553716 DMAC1Q96GE9 116 aa12.37□□□□□ -0.43
PGF-203ENST00000553716 BIRC6Q9NR09 4857 aa12.37□□□□□ -0.43
PGF-203ENST00000553716 HERC2O95714 4834 aa12.33□□□□□ -0.44
PGF-203ENST00000553716 XP32Q5T750 250 aa12.31□□□□□ -0.44
PGF-203ENST00000553716 C4orf26Q17RF5 130 aa12.3□□□□□ -0.44
PGF-203ENST00000553716 ABCA13Q86UQ4 5058 aa12.29□□□□□ -0.44
PGF-203ENST00000553716 RPL37P61927 97 aaKnown RBP12.29□□□□□ -0.44
PGF-203ENST00000553716 ACYP2P14621 99 aa12.28□□□□□ -0.44
PGF-203ENST00000553716 Q1T7F1 81 aa12.27□□□□□ -0.45
PGF-203ENST00000553716 MPLKIPQ8TAP9 179 aa12.25□□□□□ -0.45
PGF-203ENST00000553716 SPINK7P58062 85 aa12.22□□□□□ -0.45
PGF-203ENST00000553716 TPRXLQ17RH7 258 aa12.19□□□□□ -0.46
PGF-203ENST00000553716 ATP11AUNQ6ZP68 121 aa12.19□□□□□ -0.46
PGF-203ENST00000553716 V9GYY9 64 aa12.13□□□□□ -0.47
PGF-203ENST00000553716 A8MUN3 132 aa12.12□□□□□ -0.47
PGF-203ENST00000553716 KRTAP3-1Q9BYR8 98 aa12.08□□□□□ -0.48
PGF-203ENST00000553716 CHKB-CPT1BH3BT56 60 aa12.03□□□□□ -0.48
PGF-203ENST00000553716 LRP2P98164 4655 aa12.02□□□□□ -0.48
PGF-203ENST00000553716 LINC01558Q9Y6Z2 57 aa12.02□□□□□ -0.49
PGF-203ENST00000553716 J3QL48 77 aa12.01□□□□□ -0.49
PGF-203ENST00000553716 LPAP08519 4548 aa11.99□□□□□ -0.49
PGF-203ENST00000553716 COX6B2Q6YFQ2 88 aa11.98□□□□□ -0.49
PGF-203ENST00000553716 PSPHP1O15172 72 aa11.97□□□□□ -0.49
PGF-203ENST00000553716 Q5VV11 94 aa11.94□□□□□ -0.5
PGF-203ENST00000553716 PRR15LQ9BU68 103 aa11.91□□□□□ -0.5
PGF-203ENST00000553716 SPTSSBQ8NFR3 76 aa11.73□□□□□ -0.53
PGF-203ENST00000553716 PCLOQ9Y6V0 5065 aa11.71□□□□□ -0.53
PGF-203ENST00000553716 SEC61BP60468 96 aaKnown RBP11.7□□□□□ -0.54
PGF-203ENST00000553716 A0A1B0GU69 56 aa11.67□□□□□ -0.54
PGF-203ENST00000553716 BRK1Q8WUW1 75 aa11.67□□□□□ -0.54
PGF-203ENST00000553716 MUC17Q685J3 4493 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms