RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 LINC00313P59037 77 aa3.32□□□□□ -1.88
SMARCE1P3-201ENST00000553649 SPAG11BQ08648 103 aa3.32□□□□□ -1.88
SMARCE1P3-201ENST00000553649 LINC01554Q52M75 96 aa3.32□□□□□ -1.88
SMARCE1P3-201ENST00000553649 KRTAP11-1Q8IUC1 163 aa3.32□□□□□ -1.88
SMARCE1P3-201ENST00000553649 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
SMARCE1P3-201ENST00000553649 A6NN06 94 aa3.31□□□□□ -1.88
SMARCE1P3-201ENST00000553649 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
SMARCE1P3-201ENST00000553649 SCGB3A1Q96QR1 104 aa3.31□□□□□ -1.88
SMARCE1P3-201ENST00000553649 CDC42SE2Q9NRR3 84 aa3.31□□□□□ -1.88
SMARCE1P3-201ENST00000553649 A0A1B0GW54 56 aa3.3□□□□□ -1.88
SMARCE1P3-201ENST00000553649 KRTAP1-4P0C5Y4 121 aa3.3□□□□□ -1.88
SMARCE1P3-201ENST00000553649 LINC00337Q8N6G1 96 aa3.3□□□□□ -1.88
SMARCE1P3-201ENST00000553649 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
SMARCE1P3-201ENST00000553649 C11orf86A6NJI1 115 aa3.29□□□□□ -1.88
SMARCE1P3-201ENST00000553649 BAALC-AS2P0C853 105 aa3.29□□□□□ -1.88
SMARCE1P3-201ENST00000553649 C6orf99Q4VX62 202 aa3.29□□□□□ -1.88
SMARCE1P3-201ENST00000553649 SOSTDC1Q6X4U4 206 aa3.29□□□□□ -1.88
SMARCE1P3-201ENST00000553649 LIMD2Q9BT23 127 aa3.29□□□□□ -1.88
SMARCE1P3-201ENST00000553649 CNFNQ9BYD5 112 aa3.29□□□□□ -1.88
SMARCE1P3-201ENST00000553649 IGHV6-1A0A0B4J1U7 121 aa3.28□□□□□ -1.88
SMARCE1P3-201ENST00000553649 IGKV3D-7A0A0C4DH55 119 aa3.28□□□□□ -1.88
SMARCE1P3-201ENST00000553649 A0A0J9YXY3 114 aa3.28□□□□□ -1.88
SMARCE1P3-201ENST00000553649 TRBV6-5A0A0K0K1A5 114 aa3.28□□□□□ -1.88
SMARCE1P3-201ENST00000553649 hDV103S1A0JD37 113 aa3.28□□□□□ -1.88
SMARCE1P3-201ENST00000553649 NDUFA1O15239 70 aa3.28□□□□□ -1.88
SMARCE1P3-201ENST00000553649 UNQ6190/PRO20217Q6UXQ8 127 aa3.28□□□□□ -1.88
SMARCE1P3-201ENST00000553649 CLEC2BQ92478 149 aa3.28□□□□□ -1.88
SMARCE1P3-201ENST00000553649 RETNLBQ9BQ08 111 aa3.28□□□□□ -1.88
SMARCE1P3-201ENST00000553649 H7C2G1 150 aa3.27□□□□□ -1.89
SMARCE1P3-201ENST00000553649 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
SMARCE1P3-201ENST00000553649 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
SMARCE1P3-201ENST00000553649 MUSTN1Q8IVN3 82 aa3.27□□□□□ -1.89
SMARCE1P3-201ENST00000553649 OBSCN-AS1Q96MR7 158 aa3.27□□□□□ -1.89
SMARCE1P3-201ENST00000553649 C6orf48Q9UBA6 75 aa3.27□□□□□ -1.89
SMARCE1P3-201ENST00000553649 TRAV23DV6A0A075B6W5 121 aa3.26□□□□□ -1.89
SMARCE1P3-201ENST00000553649 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
SMARCE1P3-201ENST00000553649 IGIPA6NJ69 53 aa3.26□□□□□ -1.89
SMARCE1P3-201ENST00000553649 LEPROTO15243 131 aa3.26□□□□□ -1.89
SMARCE1P3-201ENST00000553649 RPL28P46779 137 aaKnown RBP3.26□□□□□ -1.89
SMARCE1P3-201ENST00000553649 POLR2KP53803 58 aaKnown RBP3.26□□□□□ -1.89
SMARCE1P3-201ENST00000553649 KRTAP7-1Q8IUC3 87 aa3.26□□□□□ -1.89
SMARCE1P3-201ENST00000553649 NDUFA12Q9UI09 145 aa3.26□□□□□ -1.89
SMARCE1P3-201ENST00000553649 A0A087WVE0 104 aa3.25□□□□□ -1.89
SMARCE1P3-201ENST00000553649 HCG22E2RYF7 251 aa3.25□□□□□ -1.89
SMARCE1P3-201ENST00000553649 ZNF861PO60384 105 aa3.25□□□□□ -1.89
SMARCE1P3-201ENST00000553649 RPL39P62891 51 aaKnown RBP3.25□□□□□ -1.89
SMARCE1P3-201ENST00000553649 FAM229BQ4G0N7 80 aa3.25□□□□□ -1.89
SMARCE1P3-201ENST00000553649 TYMSOSQ8TAI1 123 aa3.25□□□□□ -1.89
SMARCE1P3-201ENST00000553649 UBL5Q9BZL1 73 aa3.25□□□□□ -1.89
SMARCE1P3-201ENST00000553649 LINC00846Q9NV44 126 aa3.25□□□□□ -1.89
SMARCE1P3-201ENST00000553649 ANAPC11Q9NYG5 84 aa3.25□□□□□ -1.89
SMARCE1P3-201ENST00000553649 TRBV7-4A0A0J9YYF1 115 aa3.24□□□□□ -1.89
SMARCE1P3-201ENST00000553649 JMJD7-PLA2G4BH0Y9G9 81 aa3.24□□□□□ -1.89
SMARCE1P3-201ENST00000553649 C9orf129Q5T035 196 aaKnown RBP3.24□□□□□ -1.89
SMARCE1P3-201ENST00000553649 ADAMTSL4-AS1Q5T5F5 129 aa3.24□□□□□ -1.89
SMARCE1P3-201ENST00000553649 TMEM254Q8TBM7 123 aa3.24□□□□□ -1.89
SMARCE1P3-201ENST00000553649 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
SMARCE1P3-201ENST00000553649 IGLV7-46A0A075B6I9 117 aa3.23□□□□□ -1.89
SMARCE1P3-201ENST00000553649 TLX1NBP0CAT3 122 aa3.23□□□□□ -1.89
SMARCE1P3-201ENST00000553649 LINC00242Q5T6M2 205 aa3.23□□□□□ -1.89
SMARCE1P3-201ENST00000553649 SPTSSBQ8NFR3 76 aa3.23□□□□□ -1.89
SMARCE1P3-201ENST00000553649 AMELXQ99217 191 aa3.23□□□□□ -1.89
SMARCE1P3-201ENST00000553649 OCR1Q9BZK8 76 aa3.23□□□□□ -1.89
SMARCE1P3-201ENST00000553649 XAGE1AQ9HD64 81 aa3.23□□□□□ -1.89
SMARCE1P3-201ENST00000553649 SNURFQ9Y675 71 aa3.23□□□□□ -1.89
SMARCE1P3-201ENST00000553649 H0YGX0 51 aa3.22□□□□□ -1.89
SMARCE1P3-201ENST00000553649 CHKB-CPT1BH3BT56 60 aa3.22□□□□□ -1.89
SMARCE1P3-201ENST00000553649 MT1HP80294 61 aa3.22□□□□□ -1.89
SMARCE1P3-201ENST00000553649 KRTAP4-1Q9BYQ7 146 aa3.22□□□□□ -1.89
SMARCE1P3-201ENST00000553649 TOMM7Q9P0U1 55 aa3.22□□□□□ -1.89
SMARCE1P3-201ENST00000553649 C22orf24Q9Y442 160 aa3.22□□□□□ -1.89
SMARCE1P3-201ENST00000553649 ZNF706Q9Y5V0 76 aaPredicted RBP3.22□□□□□ -1.89
SMARCE1P3-201ENST00000553649 IGLV4-3A0A075B6K6 122 aa3.21□□□□□ -1.9
SMARCE1P3-201ENST00000553649 RPL37AP8A6NKH3 93 aa3.21□□□□□ -1.9
SMARCE1P3-201ENST00000553649 ELOF1P60002 83 aaKnown RBP3.21□□□□□ -1.9
SMARCE1P3-201ENST00000553649 TPRXLQ17RH7 258 aa3.21□□□□□ -1.9
SMARCE1P3-201ENST00000553649 Q5VV11 94 aa3.21□□□□□ -1.9
SMARCE1P3-201ENST00000553649 LINC00304Q8N9R0 145 aa3.21□□□□□ -1.9
SMARCE1P3-201ENST00000553649 FAM104AQ969W3 186 aa3.21□□□□□ -1.9
SMARCE1P3-201ENST00000553649 SMIM2Q9BVW6 85 aa3.21□□□□□ -1.9
SMARCE1P3-201ENST00000553649 NDUFB1O75438 58 aa3.2□□□□□ -1.9
SMARCE1P3-201ENST00000553649 NREPQ16612 68 aa3.2□□□□□ -1.9
SMARCE1P3-201ENST00000553649 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
SMARCE1P3-201ENST00000553649 LOC101927531A0A1B0GV80 90 aa3.19□□□□□ -1.9
SMARCE1P3-201ENST00000553649 H3BQ85 93 aa3.19□□□□□ -1.9
SMARCE1P3-201ENST00000553649 PDE6GP18545 87 aa3.19□□□□□ -1.9
SMARCE1P3-201ENST00000553649 C2orf66Q6UXQ4 117 aa3.19□□□□□ -1.9
SMARCE1P3-201ENST00000553649 CASC2Q6XLA1 102 aa3.19□□□□□ -1.9
SMARCE1P3-201ENST00000553649 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
SMARCE1P3-201ENST00000553649 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
SMARCE1P3-201ENST00000553649 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
SMARCE1P3-201ENST00000553649 KRTAP19-2Q3LHN2 52 aa3.18□□□□□ -1.9
SMARCE1P3-201ENST00000553649 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
SMARCE1P3-201ENST00000553649 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
SMARCE1P3-201ENST00000553649 Q8NBF4 154 aa3.18□□□□□ -1.9
SMARCE1P3-201ENST00000553649 C1orf64Q8NEQ6 169 aa3.18□□□□□ -1.9
SMARCE1P3-201ENST00000553649 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
SMARCE1P3-201ENST00000553649 A6NED7 52 aa3.17□□□□□ -1.9
SMARCE1P3-201ENST00000553649 PRLHP81277 87 aa3.17□□□□□ -1.9
SMARCE1P3-201ENST00000553649 LITAFQ99732 161 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms