RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 C20orf197Q8N268 126 aa11.2□□□□□ -0.62
RBFOX1-215ENST00000553186 LIMD2Q9BT23 127 aa11.2□□□□□ -0.62
RBFOX1-215ENST00000553186 NDUFB1O75438 58 aa11.2□□□□□ -0.62
RBFOX1-215ENST00000553186 C1orf195Q5TG92 126 aa11.18□□□□□ -0.62
RBFOX1-215ENST00000553186 SPAG11AQ6PDA7 123 aa11.18□□□□□ -0.62
RBFOX1-215ENST00000553186 OXTP01178 125 aa11.18□□□□□ -0.62
RBFOX1-215ENST00000553186 RPS29P62273 56 aaKnown RBP11.17□□□□□ -0.62
RBFOX1-215ENST00000553186 LRP1Q07954 4544 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-215ENST00000553186 A0A1B0GVX0 72 aa11.16□□□□□ -0.62
RBFOX1-215ENST00000553186 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-215ENST00000553186 WFDC13Q8IUB5 93 aa11.14□□□□□ -0.63
RBFOX1-215ENST00000553186 MMP24-AS1A0A0U1RRL7 71 aa11.13□□□□□ -0.63
RBFOX1-215ENST00000553186 IGHV6-1A0A0B4J1U7 121 aa11.12□□□□□ -0.63
RBFOX1-215ENST00000553186 OCR1Q9BZK8 76 aa11.11□□□□□ -0.63
RBFOX1-215ENST00000553186 H7BZZ5 65 aa11.11□□□□□ -0.63
RBFOX1-215ENST00000553186 CASC2Q6XLA1 102 aa11.1□□□□□ -0.63
RBFOX1-215ENST00000553186 C8orf17Q9NRJ1 99 aa11.1□□□□□ -0.63
RBFOX1-215ENST00000553186 KRTAP10-8P60410 259 aa11.1□□□□□ -0.63
RBFOX1-215ENST00000553186 KLKP1Q107X0 134 aa11.09□□□□□ -0.63
RBFOX1-215ENST00000553186 NOTCH2NLQ7Z3S9 236 aa11.09□□□□□ -0.63
RBFOX1-215ENST00000553186 TNXBP22105 4242 aa11.07□□□□□ -0.64
RBFOX1-215ENST00000553186 SNURFQ9Y675 71 aa11.07□□□□□ -0.64
RBFOX1-215ENST00000553186 hDV103S1A0JD37 113 aa11.06□□□□□ -0.64
RBFOX1-215ENST00000553186 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
RBFOX1-215ENST00000553186 FAT3Q8TDW7 4589 aa11.05□□□□□ -0.64
RBFOX1-215ENST00000553186 FAM236DA0A1B0GTK5 79 aa11.05□□□□□ -0.64
RBFOX1-215ENST00000553186 FAM236CP0DP71 79 aa11.05□□□□□ -0.64
RBFOX1-215ENST00000553186 MYCBP2O75592 4640 aa11.03□□□□□ -0.64
RBFOX1-215ENST00000553186 KRTAP4-5Q9BYR2 181 aa11□□□□□ -0.65
RBFOX1-215ENST00000553186 C8orf87E5RJ46 101 aa10.99□□□□□ -0.65
RBFOX1-215ENST00000553186 TMEM254Q8TBM7 123 aa10.97□□□□□ -0.65
RBFOX1-215ENST00000553186 MT1HL1P0DM35 61 aa10.96□□□□□ -0.65
RBFOX1-215ENST00000553186 LINC00313P59037 77 aa10.96□□□□□ -0.66
RBFOX1-215ENST00000553186 MRPL34Q9BQ48 92 aaKnown RBP10.96□□□□□ -0.66
RBFOX1-215ENST00000553186 NDUFC1O43677 76 aa10.94□□□□□ -0.66
RBFOX1-215ENST00000553186 C4orf26Q17RF5 130 aa10.94□□□□□ -0.66
RBFOX1-215ENST00000553186 SERP1Q9Y6X1 66 aa10.94□□□□□ -0.66
RBFOX1-215ENST00000553186 BIRC6Q9NR09 4857 aa10.92□□□□□ -0.66
RBFOX1-215ENST00000553186 RETNLBQ9BQ08 111 aa10.9□□□□□ -0.66
RBFOX1-215ENST00000553186 A0A0U1RQV1 116 aa10.9□□□□□ -0.66
RBFOX1-215ENST00000553186 KRTAP16-1A8MUX0 517 aa10.89□□□□□ -0.67
RBFOX1-215ENST00000553186 DMBT1Q9UGM3 2413 aaPredicted RBP10.88□□□□□ -0.67
RBFOX1-215ENST00000553186 TP53AIP1Q9HCN2 124 aa10.86□□□□□ -0.67
RBFOX1-215ENST00000553186 NDUFS5O43920 106 aa10.86□□□□□ -0.67
RBFOX1-215ENST00000553186 Q8N9P0 234 aaPredicted RBP10.84□□□□□ -0.67
RBFOX1-215ENST00000553186 HERC2O95714 4834 aa10.83□□□□□ -0.68
RBFOX1-215ENST00000553186 ATP5EP56381 51 aaPredicted RBP10.81□□□□□ -0.68
RBFOX1-215ENST00000553186 TRAV22A0A0B4J277 110 aa10.79□□□□□ -0.68
RBFOX1-215ENST00000553186 H0Y9P7 68 aa10.79□□□□□ -0.68
RBFOX1-215ENST00000553186 FP248Q71RG6 208 aaPredicted RBP10.79□□□□□ -0.68
RBFOX1-215ENST00000553186 MP68P56378 58 aa10.78□□□□□ -0.68
RBFOX1-215ENST00000553186 ZCCHC13Q8WW36 166 aaKnown RBP10.78□□□□□ -0.68
RBFOX1-215ENST00000553186 ABCA13Q86UQ4 5058 aa10.77□□□□□ -0.68
RBFOX1-215ENST00000553186 SMIM26A0A096LP01 95 aa10.75□□□□□ -0.69
RBFOX1-215ENST00000553186 Q5W150 140 aa10.75□□□□□ -0.69
RBFOX1-215ENST00000553186 C9orf92A6NGG3 77 aa10.75□□□□□ -0.69
RBFOX1-215ENST00000553186 LINC00208Q96KT6 92 aa10.74□□□□□ -0.69
RBFOX1-215ENST00000553186 KRTAP13-3Q3SY46 172 aa10.73□□□□□ -0.69
RBFOX1-215ENST00000553186 H3BPC8 53 aa10.73□□□□□ -0.69
RBFOX1-215ENST00000553186 C1orf64Q8NEQ6 169 aa10.69□□□□□ -0.7
RBFOX1-215ENST00000553186 PRO0628Q9UI54 55 aa10.67□□□□□ -0.7
RBFOX1-215ENST00000553186 C20orf166-AS1Q96NR2 134 aa10.66□□□□□ -0.7
RBFOX1-215ENST00000553186 IGLV7-46A0A075B6I9 117 aa10.65□□□□□ -0.7
RBFOX1-215ENST00000553186 A8MUU9 505 aa10.64□□□□□ -0.71
RBFOX1-215ENST00000553186 LOC101927531A0A1B0GV80 90 aa10.57□□□□□ -0.72
RBFOX1-215ENST00000553186 PRR4Q16378 134 aa10.56□□□□□ -0.72
RBFOX1-215ENST00000553186 MPLKIPQ8TAP9 179 aa10.56□□□□□ -0.72
RBFOX1-215ENST00000553186 J3QL48 77 aa10.55□□□□□ -0.72
RBFOX1-215ENST00000553186 Q75L30 129 aa10.55□□□□□ -0.72
RBFOX1-215ENST00000553186 CYP4F30PQ9H0H9 118 aa10.53□□□□□ -0.72
RBFOX1-215ENST00000553186 IGKV2-30P06310 120 aa10.51□□□□□ -0.73
RBFOX1-215ENST00000553186 PCOTHQ58A44 107 aa10.51□□□□□ -0.73
RBFOX1-215ENST00000553186 XP32Q5T750 250 aa10.5□□□□□ -0.73
RBFOX1-215ENST00000553186 TPRXLQ17RH7 258 aa10.46□□□□□ -0.73
RBFOX1-215ENST00000553186 SPANXA2-OT1Q8N9U9 137 aa10.46□□□□□ -0.73
RBFOX1-215ENST00000553186 IGKV2D-30A0A075B6S6 120 aa10.43□□□□□ -0.74
RBFOX1-215ENST00000553186 RPL37P61927 97 aaKnown RBP10.43□□□□□ -0.74
RBFOX1-215ENST00000553186 PCLOQ9Y6V0 5065 aa10.41□□□□□ -0.74
RBFOX1-215ENST00000553186 SEC61GP60059 68 aa10.4□□□□□ -0.74
RBFOX1-215ENST00000553186 BRK1Q8WUW1 75 aa10.39□□□□□ -0.75
RBFOX1-215ENST00000553186 Q1T7F1 81 aa10.39□□□□□ -0.75
RBFOX1-215ENST00000553186 V9GYY9 64 aa10.39□□□□□ -0.75
RBFOX1-215ENST00000553186 C7orf65Q6ZTY9 151 aa10.38□□□□□ -0.75
RBFOX1-215ENST00000553186 ATP11AUNQ6ZP68 121 aa10.36□□□□□ -0.75
RBFOX1-215ENST00000553186 LPAP08519 4548 aa10.36□□□□□ -0.75
RBFOX1-215ENST00000553186 HRES1P13985 223 aa10.36□□□□□ -0.75
RBFOX1-215ENST00000553186 LRP2P98164 4655 aa10.33□□□□□ -0.76
RBFOX1-215ENST00000553186 SPINK7P58062 85 aa10.31□□□□□ -0.76
RBFOX1-215ENST00000553186 PSPHP1O15172 72 aa10.26□□□□□ -0.77
RBFOX1-215ENST00000553186 HERC1Q15751 4861 aa10.22□□□□□ -0.77
RBFOX1-215ENST00000553186 DMAC1Q96GE9 116 aa10.21□□□□□ -0.77
RBFOX1-215ENST00000553186 A8MUN3 132 aa10.19□□□□□ -0.78
RBFOX1-215ENST00000553186 COA5Q86WW8 74 aa10.19□□□□□ -0.78
RBFOX1-215ENST00000553186 Q5VV11 94 aa10.14□□□□□ -0.79
RBFOX1-215ENST00000553186 ACYP2P14621 99 aa10.12□□□□□ -0.79
RBFOX1-215ENST00000553186 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
RBFOX1-215ENST00000553186 HMCN2Q8NDA2 5059 aa10.07□□□□□ -0.8
RBFOX1-215ENST00000553186 PMAIP1Q13794 54 aa10.07□□□□□ -0.8
RBFOX1-215ENST00000553186 SEC61BP60468 96 aaKnown RBP10.06□□□□□ -0.8
RBFOX1-215ENST00000553186 A8MU10 97 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms