RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 FBN1P35555 2871 aaKnown RBP3.64□□□□□ -1.83
CHMP4A-210ENST00000552620 MT3P25713 68 aa3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 LINC00483Q53H64 154 aa3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 Q6ZRN7 208 aaPredicted RBP3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 SPACA4Q8TDM5 124 aa3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 LINC00208Q96KT6 92 aa3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 DNAH9Q9NYC9 4486 aa3.63□□□□□ -1.83
CHMP4A-210ENST00000552620 ASB16-AS1Q495Z4 193 aa3.62□□□□□ -1.83
CHMP4A-210ENST00000552620 MMP24-AS1A0A0U1RRL7 71 aa3.61□□□□□ -1.83
CHMP4A-210ENST00000552620 MOBPQ13875 183 aa3.61□□□□□ -1.83
CHMP4A-210ENST00000552620 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
CHMP4A-210ENST00000552620 DNAH10Q8IVF4 4471 aa3.61□□□□□ -1.83
CHMP4A-210ENST00000552620 FLNBO75369 2602 aaKnown RBP3.6□□□□□ -1.83
CHMP4A-210ENST00000552620 A0A087WTM6 91 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 PANO1I0J062 215 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 Q96NJ1 140 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 LIMD2Q9BT23 127 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 C8orf17Q9NRJ1 99 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 MAST4O15021 2626 aa3.59□□□□□ -1.83
CHMP4A-210ENST00000552620 VPS13DQ5THJ4 4388 aa3.59□□□□□ -1.84
CHMP4A-210ENST00000552620 A0A1B0GVX0 72 aa3.58□□□□□ -1.84
CHMP4A-210ENST00000552620 PRR4Q16378 134 aa3.58□□□□□ -1.84
CHMP4A-210ENST00000552620 Q6ZR54 194 aa3.58□□□□□ -1.84
CHMP4A-210ENST00000552620 PLAC8Q9NZF1 115 aa3.58□□□□□ -1.84
CHMP4A-210ENST00000552620 PLECQ15149 4684 aaKnown RBP3.58□□□□□ -1.84
CHMP4A-210ENST00000552620 STAB1Q9NY15 2570 aa3.57□□□□□ -1.84
CHMP4A-210ENST00000552620 ZNF861PO60384 105 aa3.57□□□□□ -1.84
CHMP4A-210ENST00000552620 DNAH17Q9UFH2 4485 aa3.56□□□□□ -1.84
CHMP4A-210ENST00000552620 RTL8CO15255 209 aa3.56□□□□□ -1.84
CHMP4A-210ENST00000552620 MRPL34Q9BQ48 92 aaKnown RBP3.56□□□□□ -1.84
CHMP4A-210ENST00000552620 PSORS1C2Q9UIG4 136 aa3.56□□□□□ -1.84
CHMP4A-210ENST00000552620 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
CHMP4A-210ENST00000552620 IGHV6-1A0A0B4J1U7 121 aa3.54□□□□□ -1.84
CHMP4A-210ENST00000552620 PSPHP1O15172 72 aa3.54□□□□□ -1.84
CHMP4A-210ENST00000552620 SSBP3-AS1Q7Z2R9 100 aa3.54□□□□□ -1.84
CHMP4A-210ENST00000552620 BAHCC1Q9P281 2608 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 NOTCH1P46531 2555 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 A8MUN3 132 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 C8orf87E5RJ46 101 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 Q5VV11 94 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 COA5Q86WW8 74 aa3.53□□□□□ -1.84
CHMP4A-210ENST00000552620 LOC101927531A0A1B0GV80 90 aa3.52□□□□□ -1.85
CHMP4A-210ENST00000552620 NDUFS5O43920 106 aa3.52□□□□□ -1.85
CHMP4A-210ENST00000552620 IGLV7-43P04211 117 aa3.52□□□□□ -1.85
CHMP4A-210ENST00000552620 PCOTHQ58A44 107 aa3.52□□□□□ -1.85
CHMP4A-210ENST00000552620 C1orf134Q5TEV5 83 aa3.51□□□□□ -1.85
CHMP4A-210ENST00000552620 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
CHMP4A-210ENST00000552620 COL6A5A8TX70 2615 aa3.5□□□□□ -1.85
CHMP4A-210ENST00000552620 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
CHMP4A-210ENST00000552620 DNAH2Q9P225 4427 aa3.5□□□□□ -1.85
CHMP4A-210ENST00000552620 CHKB-CPT1BH3BT56 60 aa3.5□□□□□ -1.85
CHMP4A-210ENST00000552620 NBEAL1Q6ZS30 2694 aa3.49□□□□□ -1.85
CHMP4A-210ENST00000552620 PRR15LQ9BU68 103 aa3.49□□□□□ -1.85
CHMP4A-210ENST00000552620 ANAPC11Q9NYG5 84 aa3.49□□□□□ -1.85
CHMP4A-210ENST00000552620 KRTAP16-1A8MUX0 517 aa3.48□□□□□ -1.85
CHMP4A-210ENST00000552620 CIRBP-AS1Q8TBR5 109 aa3.48□□□□□ -1.85
CHMP4A-210ENST00000552620 DNAH6Q9C0G6 4158 aa3.47□□□□□ -1.85
CHMP4A-210ENST00000552620 HRES1P13985 223 aa3.47□□□□□ -1.85
CHMP4A-210ENST00000552620 ACYP2P14621 99 aa3.47□□□□□ -1.85
CHMP4A-210ENST00000552620 KRTAP13-3Q3SY46 172 aa3.47□□□□□ -1.85
CHMP4A-210ENST00000552620 STARD9Q9P2P6 4700 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 COL7A1Q02388 2944 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 LINC00313P59037 77 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 SPINK6Q6UWN8 80 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 ATP11AUNQ6ZP68 121 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 MGAM2Q2M2H8 2515 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 DNAH7Q8WXX0 4024 aa3.46□□□□□ -1.86
CHMP4A-210ENST00000552620 STAB2Q8WWQ8 2551 aa3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 SRRM2Q9UQ35 2752 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 A6NED7 52 aa3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 Q5W150 140 aa3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 LYSTQ99698 3801 aa3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 PRKDCP78527 4128 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-210ENST00000552620 HECTD4Q9Y4D8 3996 aa3.44□□□□□ -1.86
CHMP4A-210ENST00000552620 SPAG11AQ6PDA7 123 aa3.44□□□□□ -1.86
CHMP4A-210ENST00000552620 RBM12B-AS1Q9P1G2 102 aa3.44□□□□□ -1.86
CHMP4A-210ENST00000552620 TENM2Q9NT68 2774 aa3.44□□□□□ -1.86
CHMP4A-210ENST00000552620 LY6G6CO95867 125 aa3.43□□□□□ -1.86
CHMP4A-210ENST00000552620 LCA10Q71F78 164 aa3.43□□□□□ -1.86
CHMP4A-210ENST00000552620 DNAH11Q96DT5 4516 aa3.42□□□□□ -1.86
CHMP4A-210ENST00000552620 Q6ZSA8 131 aa3.42□□□□□ -1.86
CHMP4A-210ENST00000552620 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
CHMP4A-210ENST00000552620 ALMS1Q8TCU4 4167 aa3.41□□□□□ -1.86
CHMP4A-210ENST00000552620 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
CHMP4A-210ENST00000552620 CSMD3Q7Z407 3707 aa3.39□□□□□ -1.87
CHMP4A-210ENST00000552620 SPTSSBQ8NFR3 76 aa3.39□□□□□ -1.87
CHMP4A-210ENST00000552620 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
CHMP4A-210ENST00000552620 DNAH5Q8TE73 4624 aa3.39□□□□□ -1.87
CHMP4A-210ENST00000552620 A8MU10 97 aa3.38□□□□□ -1.87
CHMP4A-210ENST00000552620 SPINK1P00995 79 aa3.38□□□□□ -1.87
CHMP4A-210ENST00000552620 KRTAP10-1P60331 282 aa3.38□□□□□ -1.87
CHMP4A-210ENST00000552620 KTN1-AS1Q86SY8 53 aa3.38□□□□□ -1.87
CHMP4A-210ENST00000552620 A6NN06 94 aa3.37□□□□□ -1.87
CHMP4A-210ENST00000552620 KRTAP1-4P0C5Y4 121 aa3.37□□□□□ -1.87
CHMP4A-210ENST00000552620 SPINK7P58062 85 aa3.37□□□□□ -1.87
CHMP4A-210ENST00000552620 FRAS1Q86XX4 4008 aa3.36□□□□□ -1.87
CHMP4A-210ENST00000552620 RPS29P62273 56 aaKnown RBP3.36□□□□□ -1.87
CHMP4A-210ENST00000552620 KMT2AQ03164 3969 aa3.35□□□□□ -1.87
CHMP4A-210ENST00000552620 A0A1B0GU69 56 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms