RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 A0A087WVE0 104 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 LOC110117498A0A087WWA1 95 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 A0A1B0GWA3 101 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 M0R2N4 97 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 FXYD1O00168 92 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 LY6G6CO95867 125 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 SFTA3P0C7M3 94 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 C6orf201Q7Z4U5 140 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 ZCCHC13Q8WW36 166 aaKnown RBP1.91□□□□□ -2.1
HCFC2-206ENST00000552343 WFDC6Q9BQY6 131 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 HILPDAQ9Y5L2 63 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
HCFC2-206ENST00000552343 CTXND1A0A1B0GTU2 59 aa1.9□□□□□ -2.11
HCFC2-206ENST00000552343 D6R8Y8 96 aa1.9□□□□□ -2.11
HCFC2-206ENST00000552343 M0R1W7 72 aa1.9□□□□□ -2.11
HCFC2-206ENST00000552343 Q6JHZ5 121 aa1.9□□□□□ -2.11
HCFC2-206ENST00000552343 BAGE2Q86Y30 109 aa1.9□□□□□ -2.11
HCFC2-206ENST00000552343 MUSTN1Q8IVN3 82 aa1.9□□□□□ -2.11
HCFC2-206ENST00000552343 Q96NJ1 140 aa1.9□□□□□ -2.11
HCFC2-206ENST00000552343 RNF213Q63HN8 5207 aa1.9□□□□□ -2.11
HCFC2-206ENST00000552343 GCHFRP30047 84 aa1.89□□□□□ -2.11
HCFC2-206ENST00000552343 TRGV2A0A075B6R0 118 aa1.88□□□□□ -2.11
HCFC2-206ENST00000552343 TRGV1A0A0A0MS02 117 aa1.88□□□□□ -2.11
HCFC2-206ENST00000552343 UQCR11O14957 56 aa1.88□□□□□ -2.11
HCFC2-206ENST00000552343 COX8AP10176 69 aa1.88□□□□□ -2.11
HCFC2-206ENST00000552343 ZNF137PP52743 207 aa1.88□□□□□ -2.11
HCFC2-206ENST00000552343 SNURFQ9Y675 71 aa1.88□□□□□ -2.11
HCFC2-206ENST00000552343 CAV3P56539 151 aa1.87□□□□□ -2.11
HCFC2-206ENST00000552343 BAGE3Q86Y29 109 aa1.87□□□□□ -2.11
HCFC2-206ENST00000552343 UBE2D4Q9Y2X8 147 aa1.87□□□□□ -2.11
HCFC2-206ENST00000552343 FLG2Q5D862 2391 aaPredicted RBP1.86□□□□□ -2.11
HCFC2-206ENST00000552343 A0A087WXM4 84 aa1.86□□□□□ -2.11
HCFC2-206ENST00000552343 TRAV1-2A0A0B4J238 106 aa1.86□□□□□ -2.11
HCFC2-206ENST00000552343 S100A3P33764 101 aa1.86□□□□□ -2.11
HCFC2-206ENST00000552343 RPL38P63173 70 aaKnown RBP1.86□□□□□ -2.11
HCFC2-206ENST00000552343 DEFB136Q30KP8 78 aa1.86□□□□□ -2.11
HCFC2-206ENST00000552343 GDF5OSQ5U4N7 250 aa1.86□□□□□ -2.11
HCFC2-206ENST00000552343 DEFB107AQ8IZN7 70 aa1.86□□□□□ -2.11
HCFC2-206ENST00000552343 OBSCN-AS1Q96MR7 158 aa1.86□□□□□ -2.11
HCFC2-206ENST00000552343 GAFA1Q96PS6 74 aa1.86□□□□□ -2.11
HCFC2-206ENST00000552343 PLAC8Q9NZF1 115 aa1.86□□□□□ -2.11
HCFC2-206ENST00000552343 C3orf79P0CE67 100 aa1.85□□□□□ -2.11
HCFC2-206ENST00000552343 SPRR4Q96PI1 79 aa1.85□□□□□ -2.11
HCFC2-206ENST00000552343 LRP1Q07954 4544 aaKnown RBP1.84□□□□□ -2.11
HCFC2-206ENST00000552343 TRBV7-4A0A0J9YYF1 115 aa1.84□□□□□ -2.11
HCFC2-206ENST00000552343 H3BVH4 76 aa1.84□□□□□ -2.11
HCFC2-206ENST00000552343 MGPP08493 103 aa1.84□□□□□ -2.11
HCFC2-206ENST00000552343 IFI27P40305 119 aaPredicted RBP1.84□□□□□ -2.11
HCFC2-206ENST00000552343 MINOS1Q5TGZ0 78 aa1.84□□□□□ -2.11
HCFC2-206ENST00000552343 LINC00472Q9H8W2 130 aa1.84□□□□□ -2.11
HCFC2-206ENST00000552343 H3BSH0 61 aa1.83□□□□□ -2.12
HCFC2-206ENST00000552343 ACYP2P14621 99 aa1.83□□□□□ -2.12
HCFC2-206ENST00000552343 SPINK7P58062 85 aa1.83□□□□□ -2.12
HCFC2-206ENST00000552343 Q6ZQY7 126 aa1.83□□□□□ -2.12
HCFC2-206ENST00000552343 KRTAP13-1Q8IUC0 172 aa1.83□□□□□ -2.12
HCFC2-206ENST00000552343 APLNQ9ULZ1 77 aa1.83□□□□□ -2.12
HCFC2-206ENST00000552343 FXYD6-FXYD2A0A087WZ82 144 aa1.82□□□□□ -2.12
HCFC2-206ENST00000552343 ATP5EP2Q5VTU8 51 aa1.82□□□□□ -2.12
HCFC2-206ENST00000552343 LINC00846Q9NV44 126 aa1.82□□□□□ -2.12
HCFC2-206ENST00000552343 LRP2P98164 4655 aa1.82□□□□□ -2.12
HCFC2-206ENST00000552343 FAT3Q8TDW7 4589 aa1.82□□□□□ -2.12
HCFC2-206ENST00000552343 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
HCFC2-206ENST00000552343 CPSF4LA6NMK7 179 aaKnown RBP1.8□□□□□ -2.12
HCFC2-206ENST00000552343 H0Y9P7 68 aa1.8□□□□□ -2.12
HCFC2-206ENST00000552343 SPATA8Q6RVD6 105 aa1.8□□□□□ -2.12
HCFC2-206ENST00000552343 GNG13Q9P2W3 67 aa1.8□□□□□ -2.12
HCFC2-206ENST00000552343 TNXBP22105 4242 aa1.8□□□□□ -2.12
HCFC2-206ENST00000552343 PKHD1L1Q86WI1 4243 aa1.8□□□□□ -2.12
HCFC2-206ENST00000552343 DNAH8Q96JB1 4490 aa1.79□□□□□ -2.12
HCFC2-206ENST00000552343 G3V318 75 aa1.79□□□□□ -2.12
HCFC2-206ENST00000552343 FXYD6P3P58550 94 aa1.79□□□□□ -2.12
HCFC2-206ENST00000552343 COX17Q14061 63 aa1.79□□□□□ -2.12
HCFC2-206ENST00000552343 SMIM4Q8WVI0 70 aa1.79□□□□□ -2.12
HCFC2-206ENST00000552343 FAT4Q6V0I7 4981 aa1.78□□□□□ -2.12
HCFC2-206ENST00000552343 A0A1B0GUT8 65 aa1.78□□□□□ -2.12
HCFC2-206ENST00000552343 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
HCFC2-206ENST00000552343 C10orf113Q5VZT2 155 aa1.78□□□□□ -2.12
HCFC2-206ENST00000552343 MUC2Q02817 5179 aa1.77□□□□□ -2.13
HCFC2-206ENST00000552343 RPS27P42677 84 aaKnown RBP1.77□□□□□ -2.13
HCFC2-206ENST00000552343 DEFB114Q30KQ6 69 aa1.77□□□□□ -2.13
HCFC2-206ENST00000552343 Q5VSD8 79 aa1.77□□□□□ -2.13
HCFC2-206ENST00000552343 UNQ6190/PRO20217Q6UXQ8 127 aa1.77□□□□□ -2.13
HCFC2-206ENST00000552343 FAM103A1Q9BTL3 118 aaKnown RBP1.77□□□□□ -2.13
HCFC2-206ENST00000552343 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
HCFC2-206ENST00000552343 CRCT1Q9UGL9 99 aa1.77□□□□□ -2.13
HCFC2-206ENST00000552343 ATXN8Q156A1 80 aa1.76□□□□□ -2.13
HCFC2-206ENST00000552343 TMEM263Q8WUH6 116 aaKnown RBP1.76□□□□□ -2.13
HCFC2-206ENST00000552343 TRAV21A0A0B4J279 112 aa1.75□□□□□ -2.13
HCFC2-206ENST00000552343 TRBV30A0A0K0K1B3 111 aa1.75□□□□□ -2.13
HCFC2-206ENST00000552343 DEFB135Q30KP9 77 aa1.75□□□□□ -2.13
HCFC2-206ENST00000552343 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.75□□□□□ -2.13
HCFC2-206ENST00000552343 GVQW2A0A096LPI5 108 aaPredicted RBP1.74□□□□□ -2.13
HCFC2-206ENST00000552343 NDUFA3O95167 84 aa1.74□□□□□ -2.13
HCFC2-206ENST00000552343 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
HCFC2-206ENST00000552343 LINC01590Q5TEZ4 76 aa1.74□□□□□ -2.13
HCFC2-206ENST00000552343 Q6ZRX8 168 aa1.74□□□□□ -2.13
HCFC2-206ENST00000552343 LEAP2Q969E1 77 aa1.74□□□□□ -2.13
HCFC2-206ENST00000552343 SMR3BP02814 79 aaPredicted RBP1.73□□□□□ -2.13
HCFC2-206ENST00000552343 KRTAP10-4P60372 401 aaPredicted RBP1.73□□□□□ -2.13
HCFC2-206ENST00000552343 PCOTHQ58A44 107 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms