RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.5□□□□□ -1.53
SNRPF-203ENST00000551316 YPEL4Q96NS1 127 aa5.5□□□□□ -1.53
SNRPF-203ENST00000551316 LINC00472Q9H8W2 130 aa5.5□□□□□ -1.53
SNRPF-203ENST00000551316 HSPB8Q9UJY1 196 aa5.5□□□□□ -1.53
SNRPF-203ENST00000551316 S100A6P06703 90 aa5.49□□□□□ -1.53
SNRPF-203ENST00000551316 TRGC2P03986 189 aa5.48□□□□□ -1.53
SNRPF-203ENST00000551316 A0A1B0GVX0 72 aa5.47□□□□□ -1.53
SNRPF-203ENST00000551316 PPDPFLQ8WWR9 84 aa5.47□□□□□ -1.53
SNRPF-203ENST00000551316 HSBP1O75506 76 aa5.46□□□□□ -1.54
SNRPF-203ENST00000551316 LEPROTL1O95214 131 aa5.46□□□□□ -1.54
SNRPF-203ENST00000551316 C8orf87E5RJ46 101 aa5.45□□□□□ -1.54
SNRPF-203ENST00000551316 MUSTN1Q8IVN3 82 aa5.45□□□□□ -1.54
SNRPF-203ENST00000551316 LOC105371267A0A1B0GV96 52 aa5.44□□□□□ -1.54
SNRPF-203ENST00000551316 SNRPEP62304 92 aaKnown RBP5.44□□□□□ -1.54
SNRPF-203ENST00000551316 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
SNRPF-203ENST00000551316 HIST1H2BKO60814 126 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 HIST1H2BJP06899 126 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 C3orf79P0CE67 100 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 HIST1H2BOP23527 126 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 HIST1H2BBP33778 126 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 HIST1H2BDP58876 126 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 HIST1H2BCP62807 126 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 HIST2H2BEQ16778 126 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.43□□□□□ -1.54
SNRPF-203ENST00000551316 HIST1H2BHQ93079 126 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 HIST1H2BNQ99877 126 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 HIST1H2BMQ99879 126 aa5.43□□□□□ -1.54
SNRPF-203ENST00000551316 FABP4P15090 132 aa5.42□□□□□ -1.54
SNRPF-203ENST00000551316 NDUFV3P56181 108 aaKnown RBP5.42□□□□□ -1.54
SNRPF-203ENST00000551316 S100A2P29034 98 aa5.41□□□□□ -1.54
SNRPF-203ENST00000551316 KRTAP10-7P60409 375 aaPredicted RBP5.41□□□□□ -1.54
SNRPF-203ENST00000551316 VAMP3Q15836 100 aa5.41□□□□□ -1.54
SNRPF-203ENST00000551316 RAB37Q96AX2 223 aa5.41□□□□□ -1.54
SNRPF-203ENST00000551316 IGKV3D-7A0A0C4DH55 119 aa5.4□□□□□ -1.54
SNRPF-203ENST00000551316 LCA10Q71F78 164 aa5.39□□□□□ -1.55
SNRPF-203ENST00000551316 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
SNRPF-203ENST00000551316 H3BMG7 143 aa5.37□□□□□ -1.55
SNRPF-203ENST00000551316 IFITM1P13164 125 aa5.37□□□□□ -1.55
SNRPF-203ENST00000551316 HIST3H2BBQ8N257 126 aa5.37□□□□□ -1.55
SNRPF-203ENST00000551316 RBM3P98179 157 aaKnown RBP5.36□□□□□ -1.55
SNRPF-203ENST00000551316 LYRM7Q5U5X0 104 aa5.35□□□□□ -1.55
SNRPF-203ENST00000551316 COA6Q5JTJ3 125 aaKnown RBP5.34□□□□□ -1.55
SNRPF-203ENST00000551316 SCGB1D4Q6XE38 83 aa5.34□□□□□ -1.55
SNRPF-203ENST00000551316 A0A1B0GV72 72 aa5.33□□□□□ -1.56
SNRPF-203ENST00000551316 HIST1H2BLQ99880 126 aa5.33□□□□□ -1.56
SNRPF-203ENST00000551316 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
SNRPF-203ENST00000551316 TRBV7-4A0A0J9YYF1 115 aa5.31□□□□□ -1.56
SNRPF-203ENST00000551316 PRR15Q8IV56 129 aa5.31□□□□□ -1.56
SNRPF-203ENST00000551316 DSCR8Q96T75 97 aa5.31□□□□□ -1.56
SNRPF-203ENST00000551316 SMIM6P0DI80 62 aa5.3□□□□□ -1.56
SNRPF-203ENST00000551316 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
SNRPF-203ENST00000551316 C12orf57Q99622 126 aa5.3□□□□□ -1.56
SNRPF-203ENST00000551316 S4R3F8 94 aa5.3□□□□□ -1.56
SNRPF-203ENST00000551316 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
SNRPF-203ENST00000551316 C9orf118A6NHY6 69 aa5.29□□□□□ -1.56
SNRPF-203ENST00000551316 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
SNRPF-203ENST00000551316 KRTDAPP60985 99 aa5.29□□□□□ -1.56
SNRPF-203ENST00000551316 CSAG1Q6PB30 78 aa5.29□□□□□ -1.56
SNRPF-203ENST00000551316 COPS9Q8WXC6 57 aa5.28□□□□□ -1.56
SNRPF-203ENST00000551316 PYY3Q5JQD4 70 aa5.26□□□□□ -1.57
SNRPF-203ENST00000551316 PCP4L1A6NKN8 68 aa5.25□□□□□ -1.57
SNRPF-203ENST00000551316 C8orf17Q9NRJ1 99 aa5.25□□□□□ -1.57
SNRPF-203ENST00000551316 CRIPTQ9P021 101 aa5.25□□□□□ -1.57
SNRPF-203ENST00000551316 SYS1-DBNDD2H3BUS1 97 aa5.23□□□□□ -1.57
SNRPF-203ENST00000551316 LINC01545Q5VT33 79 aa5.23□□□□□ -1.57
SNRPF-203ENST00000551316 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
SNRPF-203ENST00000551316 BVES-AS1Q5T3Y7 98 aa5.22□□□□□ -1.57
SNRPF-203ENST00000551316 FABP2P12104 132 aa5.21□□□□□ -1.58
SNRPF-203ENST00000551316 C21orf62-AS1Q17RA5 79 aa5.21□□□□□ -1.58
SNRPF-203ENST00000551316 PET117Q6UWS5 81 aa5.21□□□□□ -1.58
SNRPF-203ENST00000551316 ANKRD29Q8N6D5 301 aa5.21□□□□□ -1.58
SNRPF-203ENST00000551316 VAMP8Q9BV40 100 aa5.21□□□□□ -1.58
SNRPF-203ENST00000551316 TRACP01848 142 aa5.2□□□□□ -1.58
SNRPF-203ENST00000551316 CCKP06307 115 aa5.2□□□□□ -1.58
SNRPF-203ENST00000551316 ATOH7Q8N100 152 aa5.2□□□□□ -1.58
SNRPF-203ENST00000551316 HSBP1L1C9JCN9 74 aa5.19□□□□□ -1.58
SNRPF-203ENST00000551316 TSTD3H0UI37 97 aa5.19□□□□□ -1.58
SNRPF-203ENST00000551316 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
SNRPF-203ENST00000551316 C7orf65Q6ZTY9 151 aa5.19□□□□□ -1.58
SNRPF-203ENST00000551316 PAM16Q9Y3D7 125 aa5.19□□□□□ -1.58
SNRPF-203ENST00000551316 SPATA45Q537H7 98 aa5.18□□□□□ -1.58
SNRPF-203ENST00000551316 Q5W150 140 aa5.18□□□□□ -1.58
SNRPF-203ENST00000551316 Q6ZVQ6 151 aa5.18□□□□□ -1.58
SNRPF-203ENST00000551316 C2orf91Q6ZV80 131 aa5.15□□□□□ -1.59
SNRPF-203ENST00000551316 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.59
SNRPF-203ENST00000551316 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
SNRPF-203ENST00000551316 C14orf144Q96I85 54 aa5.12□□□□□ -1.59
SNRPF-203ENST00000551316 UQCR10Q9UDW1 63 aa5.12□□□□□ -1.59
SNRPF-203ENST00000551316 MUC5ACP98088 5654 aa5.11□□□□□ -1.59
SNRPF-203ENST00000551316 A8MUN3 132 aa5.1□□□□□ -1.59
SNRPF-203ENST00000551316 CYSTM1Q9H1C7 97 aa5.1□□□□□ -1.59
SNRPF-203ENST00000551316 MMP24-AS1A0A0U1RRL7 71 aa5.09□□□□□ -1.59
SNRPF-203ENST00000551316 J3KT08 172 aa5.09□□□□□ -1.59
SNRPF-203ENST00000551316 VPS25Q9BRG1 176 aa5.09□□□□□ -1.59
SNRPF-203ENST00000551316 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
SNRPF-203ENST00000551316 MRPL34Q9BQ48 92 aaKnown RBP5.08□□□□□ -1.6
SNRPF-203ENST00000551316 COX8AP10176 69 aa5.07□□□□□ -1.6
SNRPF-203ENST00000551316 BATFQ16520 125 aa5.07□□□□□ -1.6
SNRPF-203ENST00000551316 A0A087WVE0 104 aa5.06□□□□□ -1.6
SNRPF-203ENST00000551316 NDUFB1O75438 58 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms