RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 COL12A1Q99715 3063 aa1.96□□□□□ -2.1
LETMD1-226ENST00000550755 EPG5Q9HCE0 2579 aa1.96□□□□□ -2.1
LETMD1-226ENST00000550755 TLN2Q9Y4G6 2542 aa1.95□□□□□ -2.1
LETMD1-226ENST00000550755 LINC01549A6NIU2 74 aa1.95□□□□□ -2.1
LETMD1-226ENST00000550755 SMIM2Q9BVW6 85 aa1.95□□□□□ -2.1
LETMD1-226ENST00000550755 RHPN1-AS1Q9BWJ2 59 aa1.95□□□□□ -2.1
LETMD1-226ENST00000550755 VPS13CQ709C8 3753 aa1.95□□□□□ -2.1
LETMD1-226ENST00000550755 ITPR3Q14573 2671 aa1.94□□□□□ -2.1
LETMD1-226ENST00000550755 DEFB112Q30KQ8 113 aa1.94□□□□□ -2.1
LETMD1-226ENST00000550755 SORL1Q92673 2214 aa1.94□□□□□ -2.1
LETMD1-226ENST00000550755 ZANQ9Y493 2812 aa1.94□□□□□ -2.1
LETMD1-226ENST00000550755 AKAP9Q99996 3911 aa1.94□□□□□ -2.1
LETMD1-226ENST00000550755 FBN2P35556 2912 aa1.94□□□□□ -2.1
LETMD1-226ENST00000550755 SONP18583 2426 aaKnown RBP1.93□□□□□ -2.1
LETMD1-226ENST00000550755 ASH1LQ9NR48 2969 aaKnown RBP1.93□□□□□ -2.1
LETMD1-226ENST00000550755 COX6B1P14854 86 aa1.93□□□□□ -2.1
LETMD1-226ENST00000550755 PLNP26678 52 aa1.93□□□□□ -2.1
LETMD1-226ENST00000550755 POLR2KP53803 58 aaKnown RBP1.93□□□□□ -2.1
LETMD1-226ENST00000550755 ATXN8Q156A1 80 aa1.93□□□□□ -2.1
LETMD1-226ENST00000550755 SSBP3-AS1Q7Z2R9 100 aa1.93□□□□□ -2.1
LETMD1-226ENST00000550755 WFDC9Q8NEX5 89 aa1.93□□□□□ -2.1
LETMD1-226ENST00000550755 FLNAP21333 2647 aaKnown RBP1.93□□□□□ -2.1
LETMD1-226ENST00000550755 CCDC168Q8NDH2 2452 aa1.93□□□□□ -2.1
LETMD1-226ENST00000550755 DEFB1P60022 68 aa1.92□□□□□ -2.1
LETMD1-226ENST00000550755 UBE2DNLQ8IWF7 75 aa1.92□□□□□ -2.1
LETMD1-226ENST00000550755 RPL39LQ96EH5 51 aaKnown RBP1.92□□□□□ -2.1
LETMD1-226ENST00000550755 ZNF469Q96JG9 3925 aaPredicted RBP1.92□□□□□ -2.1
LETMD1-226ENST00000550755 NBPF19A0A087WUL8 3843 aa1.92□□□□□ -2.1
LETMD1-226ENST00000550755 CSMD2Q7Z408 3487 aa1.92□□□□□ -2.1
LETMD1-226ENST00000550755 MTORP42345 2549 aa1.91□□□□□ -2.1
LETMD1-226ENST00000550755 UTP20O75691 2785 aaKnown RBP1.91□□□□□ -2.1
LETMD1-226ENST00000550755 WNK1Q9H4A3 2382 aa1.91□□□□□ -2.1
LETMD1-226ENST00000550755 IGIPA6NJ69 53 aa1.91□□□□□ -2.1
LETMD1-226ENST00000550755 K7EIL1 84 aa1.91□□□□□ -2.1
LETMD1-226ENST00000550755 M0QY20 66 aa1.91□□□□□ -2.1
LETMD1-226ENST00000550755 TIMM8BQ9Y5J9 83 aaPredicted RBP1.91□□□□□ -2.1
LETMD1-226ENST00000550755 CELSR1Q9NYQ6 3014 aa1.91□□□□□ -2.1
LETMD1-226ENST00000550755 CELSR2Q9HCU4 2923 aa1.91□□□□□ -2.1
LETMD1-226ENST00000550755 APCP25054 2843 aa1.91□□□□□ -2.1
LETMD1-226ENST00000550755 CENPEQ02224 2701 aa1.91□□□□□ -2.1
LETMD1-226ENST00000550755 MXRA5Q9NR99 2828 aa1.9□□□□□ -2.1
LETMD1-226ENST00000550755 UNC79Q9P2D8 2635 aa1.9□□□□□ -2.1
LETMD1-226ENST00000550755 JMJD1CQ15652 2540 aa1.9□□□□□ -2.1
LETMD1-226ENST00000550755 NREPQ16612 68 aa1.9□□□□□ -2.11
LETMD1-226ENST00000550755 HELZ2Q9BYK8 2649 aaKnown RBP1.9□□□□□ -2.11
LETMD1-226ENST00000550755 ACANP16112 2415 aa1.9□□□□□ -2.11
LETMD1-226ENST00000550755 TEX15Q9BXT5 2789 aa1.9□□□□□ -2.11
LETMD1-226ENST00000550755 CHD6Q8TD26 2715 aa1.89□□□□□ -2.11
LETMD1-226ENST00000550755 I3L3M4 83 aa1.89□□□□□ -2.11
LETMD1-226ENST00000550755 DEFB131AP59861 70 aa1.89□□□□□ -2.11
LETMD1-226ENST00000550755 RPL39P62891 51 aaKnown RBP1.89□□□□□ -2.11
LETMD1-226ENST00000550755 DEFB136Q30KP8 78 aa1.89□□□□□ -2.11
LETMD1-226ENST00000550755 DEFB114Q30KQ6 69 aa1.89□□□□□ -2.11
LETMD1-226ENST00000550755 CRYBG3Q68DQ2 2970 aa1.89□□□□□ -2.11
LETMD1-226ENST00000550755 SETD2Q9BYW2 2564 aaPredicted RBP1.88□□□□□ -2.11
LETMD1-226ENST00000550755 C2CD3Q4AC94 2353 aa1.88□□□□□ -2.11
LETMD1-226ENST00000550755 MAP1AP78559 2803 aaPredicted RBP1.88□□□□□ -2.11
LETMD1-226ENST00000550755 SETXQ7Z333 2677 aaKnown RBP1.87□□□□□ -2.11
LETMD1-226ENST00000550755 NSD1Q96L73 2696 aaPredicted RBP1.87□□□□□ -2.11
LETMD1-226ENST00000550755 PDZD2O15018 2839 aa1.87□□□□□ -2.11
LETMD1-226ENST00000550755 ITPR2Q14571 2701 aa1.87□□□□□ -2.11
LETMD1-226ENST00000550755 LINC00959A0A1B0GUT2 108 aa1.87□□□□□ -2.11
LETMD1-226ENST00000550755 FASNP49327 2511 aaKnown RBP1.87□□□□□ -2.11
LETMD1-226ENST00000550755 TENM4Q6N022 2769 aa1.87□□□□□ -2.11
LETMD1-226ENST00000550755 NDUFA1O15239 70 aa1.85□□□□□ -2.11
LETMD1-226ENST00000550755 NF1P21359 2839 aa1.85□□□□□ -2.11
LETMD1-226ENST00000550755 CUBNO60494 3623 aa1.84□□□□□ -2.11
LETMD1-226ENST00000550755 COX7BP24311 80 aa1.84□□□□□ -2.11
LETMD1-226ENST00000550755 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
LETMD1-226ENST00000550755 HECTD1Q9ULT8 2610 aa1.83□□□□□ -2.12
LETMD1-226ENST00000550755 LCE6AA0A183 80 aa1.83□□□□□ -2.12
LETMD1-226ENST00000550755 HTN1P15515 57 aa1.83□□□□□ -2.12
LETMD1-226ENST00000550755 DEFB104AQ8WTQ1 72 aa1.83□□□□□ -2.12
LETMD1-226ENST00000550755 NOP10Q9NPE3 64 aaKnown RBP1.83□□□□□ -2.12
LETMD1-226ENST00000550755 CDKN2A-AS1Q9UH64 79 aa1.83□□□□□ -2.12
LETMD1-226ENST00000550755 GCN1Q92616 2671 aaKnown RBP1.82□□□□□ -2.12
LETMD1-226ENST00000550755 COX6A2Q02221 97 aa1.82□□□□□ -2.12
LETMD1-226ENST00000550755 ATRQ13535 2644 aa1.81□□□□□ -2.12
LETMD1-226ENST00000550755 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
LETMD1-226ENST00000550755 Q6ZSA8 131 aa1.81□□□□□ -2.12
LETMD1-226ENST00000550755 LINC00308Q8TCZ7 52 aa1.81□□□□□ -2.12
LETMD1-226ENST00000550755 F8P00451 2351 aa1.81□□□□□ -2.12
LETMD1-226ENST00000550755 DNAH3Q8TD57 4116 aa1.81□□□□□ -2.12
LETMD1-226ENST00000550755 TEP1Q99973 2627 aaKnown RBP1.81□□□□□ -2.12
LETMD1-226ENST00000550755 HIVEP1P15822 2718 aa1.81□□□□□ -2.12
LETMD1-226ENST00000550755 NIPBLQ6KC79 2804 aaeCLIP1.81□□□□□ -2.12
LETMD1-226ENST00000550755 OTOGQ6ZRI0 2925 aa1.8□□□□□ -2.12
LETMD1-226ENST00000550755 FBN3Q75N90 2809 aa1.8□□□□□ -2.12
LETMD1-226ENST00000550755 PRO0255Q9UI72 69 aa1.8□□□□□ -2.12
LETMD1-226ENST00000550755 DNAH1Q9P2D7 4330 aa1.8□□□□□ -2.12
LETMD1-226ENST00000550755 VWFP04275 2813 aa1.79□□□□□ -2.12
LETMD1-226ENST00000550755 Q8IZM0 81 aa1.79□□□□□ -2.12
LETMD1-226ENST00000550755 SMR3AQ99954 134 aa1.79□□□□□ -2.12
LETMD1-226ENST00000550755 CMYA5Q8N3K9 4069 aa1.79□□□□□ -2.12
LETMD1-226ENST00000550755 TENM1Q9UKZ4 2725 aa1.79□□□□□ -2.12
LETMD1-226ENST00000550755 HUWE1Q7Z6Z7 4374 aaKnown RBP1.79□□□□□ -2.12
LETMD1-226ENST00000550755 TRRAPQ9Y4A5 3859 aa1.78□□□□□ -2.12
LETMD1-226ENST00000550755 H3BNG1 76 aa1.78□□□□□ -2.12
LETMD1-226ENST00000550755 DEFB135Q30KP9 77 aa1.78□□□□□ -2.12
LETMD1-226ENST00000550755 LELP1Q5T871 98 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms