RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 CSMD2Q7Z408 3487 aa6.15□□□□□ -1.43
SMARCC2-209ENST00000550164 PRAC1Q96KF2 57 aa6.15□□□□□ -1.43
SMARCC2-209ENST00000550164 A0A087X002 238 aa6.12□□□□□ -1.43
SMARCC2-209ENST00000550164 NOTCH2NLQ7Z3S9 236 aa6.12□□□□□ -1.43
SMARCC2-209ENST00000550164 FBN1P35555 2871 aaKnown RBP6.12□□□□□ -1.43
SMARCC2-209ENST00000550164 PKD1L1Q8TDX9 2849 aa6.11□□□□□ -1.43
SMARCC2-209ENST00000550164 C9orf92A6NGG3 77 aa6.1□□□□□ -1.43
SMARCC2-209ENST00000550164 Q5W150 140 aa6.1□□□□□ -1.43
SMARCC2-209ENST00000550164 Q6ZR54 194 aa6.1□□□□□ -1.43
SMARCC2-209ENST00000550164 DMBT1Q9UGM3 2413 aaPredicted RBP6.1□□□□□ -1.43
SMARCC2-209ENST00000550164 PLAC8Q9NZF1 115 aa6.1□□□□□ -1.43
SMARCC2-209ENST00000550164 TENM4Q6N022 2769 aa6.09□□□□□ -1.43
SMARCC2-209ENST00000550164 LINC00304Q8N9R0 145 aa6.08□□□□□ -1.44
SMARCC2-209ENST00000550164 SMR3BP02814 79 aaPredicted RBP6.06□□□□□ -1.44
SMARCC2-209ENST00000550164 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
SMARCC2-209ENST00000550164 OTOGQ6ZRI0 2925 aa6.05□□□□□ -1.44
SMARCC2-209ENST00000550164 LINC01554Q52M75 96 aa6.01□□□□□ -1.45
SMARCC2-209ENST00000550164 DMAC1Q96GE9 116 aa6.01□□□□□ -1.45
SMARCC2-209ENST00000550164 NBPF19A0A087WUL8 3843 aa6.01□□□□□ -1.45
SMARCC2-209ENST00000550164 A6NN06 94 aa5.99□□□□□ -1.45
SMARCC2-209ENST00000550164 VPS13CQ709C8 3753 aa5.99□□□□□ -1.45
SMARCC2-209ENST00000550164 KRTAP13-1Q8IUC0 172 aa5.98□□□□□ -1.45
SMARCC2-209ENST00000550164 CSAG1Q6PB30 78 aa5.97□□□□□ -1.45
SMARCC2-209ENST00000550164 Q6ZRN7 208 aaPredicted RBP5.96□□□□□ -1.45
SMARCC2-209ENST00000550164 A0A1B0GU33 70 aa5.95□□□□□ -1.46
SMARCC2-209ENST00000550164 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
SMARCC2-209ENST00000550164 FLG2Q5D862 2391 aaPredicted RBP5.95□□□□□ -1.46
SMARCC2-209ENST00000550164 TENM2Q9NT68 2774 aa5.95□□□□□ -1.46
SMARCC2-209ENST00000550164 ZFHX3Q15911 3703 aa5.95□□□□□ -1.46
SMARCC2-209ENST00000550164 A0A0D9SG42 100 aa5.93□□□□□ -1.46
SMARCC2-209ENST00000550164 KRTAP10-2P60368 255 aa5.93□□□□□ -1.46
SMARCC2-209ENST00000550164 ADM2Q7Z4H4 148 aa5.91□□□□□ -1.46
SMARCC2-209ENST00000550164 SRRM2Q9UQ35 2752 aaKnown RBP5.91□□□□□ -1.46
SMARCC2-209ENST00000550164 TGP01266 2768 aa5.89□□□□□ -1.47
SMARCC2-209ENST00000550164 KRTAP10-1P60331 282 aa5.89□□□□□ -1.47
SMARCC2-209ENST00000550164 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
SMARCC2-209ENST00000550164 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
SMARCC2-209ENST00000550164 TRRAPQ9Y4A5 3859 aa5.86□□□□□ -1.47
SMARCC2-209ENST00000550164 H3BS24 57 aa5.83□□□□□ -1.48
SMARCC2-209ENST00000550164 ASB16-AS1Q495Z4 193 aa5.82□□□□□ -1.48
SMARCC2-209ENST00000550164 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
SMARCC2-209ENST00000550164 H1FX-AS1Q4G0G2 97 aa5.75□□□□□ -1.49
SMARCC2-209ENST00000550164 AKAP9Q99996 3911 aa5.73□□□□□ -1.49
SMARCC2-209ENST00000550164 ANK3Q12955 4377 aaKnown RBP5.72□□□□□ -1.49
SMARCC2-209ENST00000550164 ZNF469Q96JG9 3925 aaPredicted RBP5.71□□□□□ -1.5
SMARCC2-209ENST00000550164 FBN3Q75N90 2809 aa5.71□□□□□ -1.5
SMARCC2-209ENST00000550164 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
SMARCC2-209ENST00000550164 COX6B2Q6YFQ2 88 aa5.67□□□□□ -1.5
SMARCC2-209ENST00000550164 S4R3F8 94 aa5.66□□□□□ -1.5
SMARCC2-209ENST00000550164 COL7A1Q02388 2944 aa5.65□□□□□ -1.5
SMARCC2-209ENST00000550164 ROMO1P60602 79 aa5.65□□□□□ -1.5
SMARCC2-209ENST00000550164 KRTAP25-1Q3LHN0 102 aa5.64□□□□□ -1.51
SMARCC2-209ENST00000550164 KRTAP13-3Q3SY46 172 aa5.62□□□□□ -1.51
SMARCC2-209ENST00000550164 Q6ZSA8 131 aa5.61□□□□□ -1.51
SMARCC2-209ENST00000550164 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
SMARCC2-209ENST00000550164 KRTAP16-1A8MUX0 517 aa5.59□□□□□ -1.51
SMARCC2-209ENST00000550164 MEGF8Q7Z7M0 2845 aa5.57□□□□□ -1.52
SMARCC2-209ENST00000550164 RPS29P62273 56 aaKnown RBP5.57□□□□□ -1.52
SMARCC2-209ENST00000550164 H0YAA0 97 aa5.55□□□□□ -1.52
SMARCC2-209ENST00000550164 CSMD3Q7Z407 3707 aa5.55□□□□□ -1.52
SMARCC2-209ENST00000550164 A8MUU9 505 aa5.53□□□□□ -1.52
SMARCC2-209ENST00000550164 C20orf166-AS1Q96NR2 134 aa5.51□□□□□ -1.53
SMARCC2-209ENST00000550164 Q5VSD8 79 aa5.5□□□□□ -1.53
SMARCC2-209ENST00000550164 R4GN34 69 aa5.49□□□□□ -1.53
SMARCC2-209ENST00000550164 J3QL48 77 aa5.48□□□□□ -1.53
SMARCC2-209ENST00000550164 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
SMARCC2-209ENST00000550164 M0QZ58 72 aa5.45□□□□□ -1.54
SMARCC2-209ENST00000550164 LUZP6Q538Z0 58 aa5.43□□□□□ -1.54
SMARCC2-209ENST00000550164 C10orf95Q9H7T3 257 aa5.4□□□□□ -1.55
SMARCC2-209ENST00000550164 NDUFAF8A1L188 74 aa5.39□□□□□ -1.55
SMARCC2-209ENST00000550164 KRTAP21-3Q3LHN1 58 aa5.36□□□□□ -1.55
SMARCC2-209ENST00000550164 ANK2Q01484 3957 aa5.34□□□□□ -1.55
SMARCC2-209ENST00000550164 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
SMARCC2-209ENST00000550164 HUWE1Q7Z6Z7 4374 aaKnown RBP5.3□□□□□ -1.56
SMARCC2-209ENST00000550164 P0C880 135 aa5.29□□□□□ -1.56
SMARCC2-209ENST00000550164 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
SMARCC2-209ENST00000550164 DNHD1Q96M86 4753 aa5.29□□□□□ -1.56
SMARCC2-209ENST00000550164 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
SMARCC2-209ENST00000550164 XP32Q5T750 250 aa5.29□□□□□ -1.56
SMARCC2-209ENST00000550164 DNAH10Q8IVF4 4471 aa5.22□□□□□ -1.57
SMARCC2-209ENST00000550164 CMYA5Q8N3K9 4069 aa5.2□□□□□ -1.58
SMARCC2-209ENST00000550164 DNAH3Q8TD57 4116 aa5.17□□□□□ -1.58
SMARCC2-209ENST00000550164 M0R2T5 61 aa5.16□□□□□ -1.58
SMARCC2-209ENST00000550164 TPRXLQ17RH7 258 aa5.14□□□□□ -1.59
SMARCC2-209ENST00000550164 KRTAP12-2P59991 146 aa5.14□□□□□ -1.59
SMARCC2-209ENST00000550164 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
SMARCC2-209ENST00000550164 KRTAP10-8P60410 259 aa5.11□□□□□ -1.59
SMARCC2-209ENST00000550164 KRTAP10-6P60371 365 aaPredicted RBP5.11□□□□□ -1.59
SMARCC2-209ENST00000550164 PLECQ15149 4684 aaKnown RBP5.1□□□□□ -1.59
SMARCC2-209ENST00000550164 A0A1B0GVY2 172 aa5.09□□□□□ -1.59
SMARCC2-209ENST00000550164 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
SMARCC2-209ENST00000550164 DNAH9Q9NYC9 4486 aa5.08□□□□□ -1.6
SMARCC2-209ENST00000550164 KRTAP12-1P59990 96 aa5.06□□□□□ -1.6
SMARCC2-209ENST00000550164 DNAH1Q9P2D7 4330 aa5.04□□□□□ -1.6
SMARCC2-209ENST00000550164 DNAH11Q96DT5 4516 aa5.03□□□□□ -1.6
SMARCC2-209ENST00000550164 KRTAP3-3Q9BYR6 98 aa4.99□□□□□ -1.61
SMARCC2-209ENST00000550164 TNP1P09430 55 aa4.99□□□□□ -1.61
SMARCC2-209ENST00000550164 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
SMARCC2-209ENST00000550164 PRKDCP78527 4128 aaKnown RBP4.96□□□□□ -1.62
SMARCC2-209ENST00000550164 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms