RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 DNAH11Q96DT5 4516 aa-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 TOGARAM1Q9Y4F4 1720 aa-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 LAMA5O15230 3695 aa-0.22□□□□□ -2.44
PRIM1-204ENST00000549549 NBPF19A0A087WUL8 3843 aa-0.22□□□□□ -2.44
PRIM1-204ENST00000549549 FASNP49327 2511 aaKnown RBP-0.22□□□□□ -2.44
PRIM1-204ENST00000549549 CRIP1P50238 77 aa-0.22□□□□□ -2.44
PRIM1-204ENST00000549549 DEFB114Q30KQ6 69 aa-0.22□□□□□ -2.44
PRIM1-204ENST00000549549 APOBP04114 4563 aaKnown RBP-0.22□□□□□ -2.44
PRIM1-204ENST00000549549 PKHD1L1Q86WI1 4243 aa-0.22□□□□□ -2.45
PRIM1-204ENST00000549549 EFCAB5A4FU69 1503 aa-0.23□□□□□ -2.45
PRIM1-204ENST00000549549 KRTAP19-8Q3LI54 63 aa-0.23□□□□□ -2.45
PRIM1-204ENST00000549549 LRRK2Q5S007 2527 aa-0.23□□□□□ -2.45
PRIM1-204ENST00000549549 DNMBPQ6XZF7 1577 aa-0.23□□□□□ -2.45
PRIM1-204ENST00000549549 MUC12Q9UKN1 5478 aa-0.24□□□□□ -2.45
PRIM1-204ENST00000549549 ANKRD11Q6UB99 2663 aaPredicted RBP-0.24□□□□□ -2.45
PRIM1-204ENST00000549549 KALRNO60229 2985 aa-0.24□□□□□ -2.45
PRIM1-204ENST00000549549 SPRR2FQ96RM1 72 aa-0.24□□□□□ -2.45
PRIM1-204ENST00000549549 RELNP78509 3460 aa-0.24□□□□□ -2.45
PRIM1-204ENST00000549549 HIVEP1P15822 2718 aa-0.24□□□□□ -2.45
PRIM1-204ENST00000549549 CDC42BPAQ5VT25 1732 aa-0.24□□□□□ -2.45
PRIM1-204ENST00000549549 ACACAQ13085 2346 aa-0.25□□□□□ -2.45
PRIM1-204ENST00000549549 FAM186AA6NE01 2351 aa-0.25□□□□□ -2.45
PRIM1-204ENST00000549549 TRIOO75962 3097 aa-0.25□□□□□ -2.45
PRIM1-204ENST00000549549 FCER1GP30273 86 aa-0.25□□□□□ -2.45
PRIM1-204ENST00000549549 C6orf48Q9UBA6 75 aa-0.25□□□□□ -2.45
PRIM1-204ENST00000549549 ABCA6Q8N139 1617 aa-0.26□□□□□ -2.45
PRIM1-204ENST00000549549 RPS27P42677 84 aaKnown RBP-0.26□□□□□ -2.45
PRIM1-204ENST00000549549 WT1-ASQ06250 92 aa-0.26□□□□□ -2.45
PRIM1-204ENST00000549549 DEFB110Q30KQ9 67 aa-0.26□□□□□ -2.45
PRIM1-204ENST00000549549 NCBP2-AS2Q69YL0 99 aa-0.26□□□□□ -2.45
PRIM1-204ENST00000549549 RPS27LQ71UM5 84 aaKnown RBP-0.26□□□□□ -2.45
PRIM1-204ENST00000549549 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.26□□□□□ -2.45
PRIM1-204ENST00000549549 TACC2O95359 2948 aa-0.26□□□□□ -2.45
PRIM1-204ENST00000549549 LY75O60449 1722 aa-0.27□□□□□ -2.45
PRIM1-204ENST00000549549 CROCC2H7BZ55 1655 aa-0.27□□□□□ -2.45
PRIM1-204ENST00000549549 STARD9Q9P2P6 4700 aa-0.27□□□□□ -2.45
PRIM1-204ENST00000549549 MT1AP04731 61 aa-0.27□□□□□ -2.45
PRIM1-204ENST00000549549 UTP20O75691 2785 aaKnown RBP-0.27□□□□□ -2.45
PRIM1-204ENST00000549549 TIAM1Q13009 1591 aa-0.28□□□□□ -2.45
PRIM1-204ENST00000549549 CLASP1Q7Z460 1538 aa-0.28□□□□□ -2.45
PRIM1-204ENST00000549549 LINC01549A6NIU2 74 aa-0.28□□□□□ -2.45
PRIM1-204ENST00000549549 SFTA3P0C7M3 94 aa-0.28□□□□□ -2.45
PRIM1-204ENST00000549549 SPENQ96T58 3664 aaKnown RBP-0.28□□□□□ -2.45
PRIM1-204ENST00000549549 MYO18BQ8IUG5 2567 aa-0.28□□□□□ -2.45
PRIM1-204ENST00000549549 FAT1Q14517 4588 aa-0.29□□□□□ -2.46
PRIM1-204ENST00000549549 MUC17Q685J3 4493 aa-0.29□□□□□ -2.46
PRIM1-204ENST00000549549 A0A1B0GUL6 1792 aa-0.29□□□□□ -2.46
PRIM1-204ENST00000549549 HERC1Q15751 4861 aa-0.3□□□□□ -2.46
PRIM1-204ENST00000549549 MGAM2Q2M2H8 2515 aa-0.3□□□□□ -2.46
PRIM1-204ENST00000549549 ACACBO00763 2458 aa-0.3□□□□□ -2.46
PRIM1-204ENST00000549549 PCLOQ9Y6V0 5065 aa-0.3□□□□□ -2.46
PRIM1-204ENST00000549549 DNAH2Q9P225 4427 aa-0.3□□□□□ -2.46
PRIM1-204ENST00000549549 H3BUA1 57 aa-0.3□□□□□ -2.46
PRIM1-204ENST00000549549 SACSQ9NZJ4 4579 aa-0.3□□□□□ -2.46
PRIM1-204ENST00000549549 CCDC168Q8NDH2 2452 aa-0.3□□□□□ -2.46
PRIM1-204ENST00000549549 SPTBN5Q9NRC6 3674 aaKnown RBP-0.31□□□□□ -2.46
PRIM1-204ENST00000549549 LAMA1P25391 3075 aa-0.31□□□□□ -2.46
PRIM1-204ENST00000549549 WDR87Q6ZQQ6 2873 aa-0.31□□□□□ -2.46
PRIM1-204ENST00000549549 GLI2P10070 1586 aa-0.32□□□□□ -2.46
PRIM1-204ENST00000549549 NBEAQ8NFP9 2946 aa-0.32□□□□□ -2.46
PRIM1-204ENST00000549549 ALS2Q96Q42 1657 aa-0.32□□□□□ -2.46
PRIM1-204ENST00000549549 DNAH1Q9P2D7 4330 aa-0.32□□□□□ -2.46
PRIM1-204ENST00000549549 NBEAL2Q6ZNJ1 2754 aa-0.32□□□□□ -2.46
PRIM1-204ENST00000549549 USP9YO00507 2555 aaPredicted RBP-0.32□□□□□ -2.46
PRIM1-204ENST00000549549 ITPR3Q14573 2671 aa-0.32□□□□□ -2.46
PRIM1-204ENST00000549549 ABCA10Q8WWZ4 1543 aa-0.33□□□□□ -2.46
PRIM1-204ENST00000549549 A0A0C4DFX4 3053 aa-0.33□□□□□ -2.46
PRIM1-204ENST00000549549 IGLV5-48A0A075B6I7 105 aa-0.33□□□□□ -2.46
PRIM1-204ENST00000549549 K7EMI3 77 aa-0.33□□□□□ -2.46
PRIM1-204ENST00000549549 M0R1W7 72 aa-0.33□□□□□ -2.46
PRIM1-204ENST00000549549 NOP10Q9NPE3 64 aaKnown RBP-0.33□□□□□ -2.46
PRIM1-204ENST00000549549 A0A087WWC5 75 aa-0.34□□□□□ -2.46
PRIM1-204ENST00000549549 EEA1Q15075 1411 aa-0.34□□□□□ -2.46
PRIM1-204ENST00000549549 RIF1Q5UIP0 2472 aaKnown RBP-0.34□□□□□ -2.46
PRIM1-204ENST00000549549 UGGT1Q9NYU2 1555 aa-0.34□□□□□ -2.46
PRIM1-204ENST00000549549 TLN2Q9Y4G6 2542 aa-0.35□□□□□ -2.47
PRIM1-204ENST00000549549 SERF2P84101 59 aa-0.35□□□□□ -2.47
PRIM1-204ENST00000549549 LAMA3Q16787 3333 aa-0.35□□□□□ -2.47
PRIM1-204ENST00000549549 MMP24-AS1A0A0U1RRL7 71 aa-0.36□□□□□ -2.47
PRIM1-204ENST00000549549 TNP1P09430 55 aa-0.36□□□□□ -2.47
PRIM1-204ENST00000549549 NMES1Q9C002 83 aa-0.36□□□□□ -2.47
PRIM1-204ENST00000549549 HERC2O95714 4834 aa-0.36□□□□□ -2.47
PRIM1-204ENST00000549549 FAM208AQ9UK61 1670 aaKnown RBP-0.37□□□□□ -2.47
PRIM1-204ENST00000549549 CPS1P31327 1500 aa-0.37□□□□□ -2.47
PRIM1-204ENST00000549549 COL12A1Q99715 3063 aa-0.37□□□□□ -2.47
PRIM1-204ENST00000549549 UBR4Q5T4S7 5183 aa-0.37□□□□□ -2.47
PRIM1-204ENST00000549549 KRTAP20-2Q3LI61 65 aa-0.37□□□□□ -2.47
PRIM1-204ENST00000549549 S100ZQ8WXG8 99 aa-0.37□□□□□ -2.47
PRIM1-204ENST00000549549 ABRACLQ9P1F3 81 aa-0.37□□□□□ -2.47
PRIM1-204ENST00000549549 PLECQ15149 4684 aaKnown RBP-0.37□□□□□ -2.47
PRIM1-204ENST00000549549 USH2AO75445 5202 aa-0.38□□□□□ -2.47
PRIM1-204ENST00000549549 EFCAB6Q5THR3 1501 aa-0.38□□□□□ -2.47
PRIM1-204ENST00000549549 TMEM167BQ9NRX6 74 aa-0.38□□□□□ -2.47
PRIM1-204ENST00000549549 PRXQ9BXM0 1461 aa-0.38□□□□□ -2.47
PRIM1-204ENST00000549549 DNAH8Q96JB1 4490 aa-0.39□□□□□ -2.47
PRIM1-204ENST00000549549 FRYQ5TBA9 3013 aa-0.39□□□□□ -2.47
PRIM1-204ENST00000549549 MAST1Q9Y2H9 1570 aa-0.39□□□□□ -2.47
PRIM1-204ENST00000549549 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.39□□□□□ -2.47
PRIM1-204ENST00000549549 M0QY20 66 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms