RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 CREBBPQ92793 2442 aa1.59□□□□□ -2.15
PRDM4-204ENST00000549416 ADGRG4Q8IZF6 3080 aa1.59□□□□□ -2.15
PRDM4-204ENST00000549416 HTN1P15515 57 aa1.59□□□□□ -2.15
PRDM4-204ENST00000549416 WT1-ASQ06250 92 aa1.59□□□□□ -2.15
PRDM4-204ENST00000549416 WFDC13Q8IUB5 93 aa1.59□□□□□ -2.15
PRDM4-204ENST00000549416 SPTBN1Q01082 2364 aaKnown RBP1.59□□□□□ -2.16
PRDM4-204ENST00000549416 MGAQ8IWI9 3026 aa1.59□□□□□ -2.16
PRDM4-204ENST00000549416 LAMA5O15230 3695 aa1.59□□□□□ -2.16
PRDM4-204ENST00000549416 USF3Q68DE3 2245 aa1.59□□□□□ -2.16
PRDM4-204ENST00000549416 DCHS1Q96JQ0 3298 aa1.58□□□□□ -2.16
PRDM4-204ENST00000549416 IGSF10Q6WRI0 2623 aa1.58□□□□□ -2.16
PRDM4-204ENST00000549416 DEFB136Q30KP8 78 aa1.58□□□□□ -2.16
PRDM4-204ENST00000549416 WFDC10BQ8IUB3 73 aa1.58□□□□□ -2.16
PRDM4-204ENST00000549416 COL12A1Q99715 3063 aa1.58□□□□□ -2.16
PRDM4-204ENST00000549416 ZZEF1O43149 2961 aa1.58□□□□□ -2.16
PRDM4-204ENST00000549416 LRBAP50851 2863 aa1.57□□□□□ -2.16
PRDM4-204ENST00000549416 PLCE1Q9P212 2302 aa1.57□□□□□ -2.16
PRDM4-204ENST00000549416 HECTD1Q9ULT8 2610 aa1.57□□□□□ -2.16
PRDM4-204ENST00000549416 K7EIM0 57 aa1.57□□□□□ -2.16
PRDM4-204ENST00000549416 DEFB131AP59861 70 aa1.57□□□□□ -2.16
PRDM4-204ENST00000549416 H1FX-AS1Q4G0G2 97 aa1.57□□□□□ -2.16
PRDM4-204ENST00000549416 Q6ZSA8 131 aa1.57□□□□□ -2.16
PRDM4-204ENST00000549416 CRCT1Q9UGL9 99 aa1.57□□□□□ -2.16
PRDM4-204ENST00000549416 FLNBO75369 2602 aaKnown RBP1.57□□□□□ -2.16
PRDM4-204ENST00000549416 CHD6Q8TD26 2715 aa1.57□□□□□ -2.16
PRDM4-204ENST00000549416 PTPN13Q12923 2485 aa1.57□□□□□ -2.16
PRDM4-204ENST00000549416 FASNP49327 2511 aaKnown RBP1.57□□□□□ -2.16
PRDM4-204ENST00000549416 SMG1Q96Q15 3661 aaKnown RBP1.56□□□□□ -2.16
PRDM4-204ENST00000549416 UBR5O95071 2799 aaPredicted RBP1.56□□□□□ -2.16
PRDM4-204ENST00000549416 CCDC168Q8NDH2 2452 aa1.56□□□□□ -2.16
PRDM4-204ENST00000549416 TACC2O95359 2948 aa1.56□□□□□ -2.16
PRDM4-204ENST00000549416 MYO9AB2RTY4 2548 aa1.56□□□□□ -2.16
PRDM4-204ENST00000549416 IGLV5-48A0A075B6I7 105 aa1.56□□□□□ -2.16
PRDM4-204ENST00000549416 SPART-AS1P0CW21 52 aa1.56□□□□□ -2.16
PRDM4-204ENST00000549416 POLR2KP53803 58 aaKnown RBP1.56□□□□□ -2.16
PRDM4-204ENST00000549416 KRTAP21-3Q3LHN1 58 aa1.56□□□□□ -2.16
PRDM4-204ENST00000549416 LELP1Q5T871 98 aa1.56□□□□□ -2.16
PRDM4-204ENST00000549416 Q5VSD8 79 aa1.56□□□□□ -2.16
PRDM4-204ENST00000549416 USP9YO00507 2555 aaPredicted RBP1.56□□□□□ -2.16
PRDM4-204ENST00000549416 UNC79Q9P2D8 2635 aa1.55□□□□□ -2.16
PRDM4-204ENST00000549416 PKDREJQ9NTG1 2253 aa1.55□□□□□ -2.16
PRDM4-204ENST00000549416 DCHS2Q6V1P9 2916 aa1.55□□□□□ -2.16
PRDM4-204ENST00000549416 DEFB130BP0DP73 79 aa1.55□□□□□ -2.16
PRDM4-204ENST00000549416 DEFB130AP0DP74 79 aa1.55□□□□□ -2.16
PRDM4-204ENST00000549416 HTN3P15516 51 aa1.55□□□□□ -2.16
PRDM4-204ENST00000549416 APLNQ9ULZ1 77 aa1.55□□□□□ -2.16
PRDM4-204ENST00000549416 HELZ2Q9BYK8 2649 aaKnown RBP1.55□□□□□ -2.16
PRDM4-204ENST00000549416 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.55□□□□□ -2.16
PRDM4-204ENST00000549416 SPG11Q96JI7 2443 aa1.55□□□□□ -2.16
PRDM4-204ENST00000549416 ABCA2Q9BZC7 2435 aa1.54□□□□□ -2.16
PRDM4-204ENST00000549416 SPRR1AP35321 89 aa1.54□□□□□ -2.16
PRDM4-204ENST00000549416 RPL39P62891 51 aaKnown RBP1.54□□□□□ -2.16
PRDM4-204ENST00000549416 DEFB135Q30KP9 77 aa1.54□□□□□ -2.16
PRDM4-204ENST00000549416 DEFB105AQ8NG35 78 aa1.54□□□□□ -2.16
PRDM4-204ENST00000549416 CFAP46Q8IYW2 2715 aa1.54□□□□□ -2.16
PRDM4-204ENST00000549416 RELNP78509 3460 aa1.54□□□□□ -2.16
PRDM4-204ENST00000549416 USP9XQ93008 2570 aaPredicted RBP1.53□□□□□ -2.16
PRDM4-204ENST00000549416 ROS1P08922 2347 aa1.53□□□□□ -2.16
PRDM4-204ENST00000549416 HIVEP3Q5T1R4 2406 aa1.53□□□□□ -2.16
PRDM4-204ENST00000549416 CRYBG3Q68DQ2 2970 aa1.53□□□□□ -2.16
PRDM4-204ENST00000549416 ABCA12Q86UK0 2595 aa1.53□□□□□ -2.16
PRDM4-204ENST00000549416 RPL39LQ96EH5 51 aaKnown RBP1.53□□□□□ -2.16
PRDM4-204ENST00000549416 PCNX1Q96RV3 2341 aa1.53□□□□□ -2.16
PRDM4-204ENST00000549416 DOPEY2Q9Y3R5 2298 aa1.53□□□□□ -2.16
PRDM4-204ENST00000549416 CELSR1Q9NYQ6 3014 aa1.53□□□□□ -2.17
PRDM4-204ENST00000549416 ASH1LQ9NR48 2969 aaKnown RBP1.53□□□□□ -2.17
PRDM4-204ENST00000549416 GCN1Q92616 2671 aaKnown RBP1.53□□□□□ -2.17
PRDM4-204ENST00000549416 CELSR2Q9HCU4 2923 aa1.52□□□□□ -2.17
PRDM4-204ENST00000549416 KLK9Q2XQG4 91 aa1.52□□□□□ -2.17
PRDM4-204ENST00000549416 NOP10Q9NPE3 64 aaKnown RBP1.52□□□□□ -2.17
PRDM4-204ENST00000549416 AKAP6Q13023 2319 aa1.52□□□□□ -2.17
PRDM4-204ENST00000549416 VPS13CQ709C8 3753 aa1.52□□□□□ -2.17
PRDM4-204ENST00000549416 POLQO75417 2590 aa1.52□□□□□ -2.17
PRDM4-204ENST00000549416 CSPG4Q6UVK1 2322 aa1.51□□□□□ -2.17
PRDM4-204ENST00000549416 AKAP9Q99996 3911 aa1.51□□□□□ -2.17
PRDM4-204ENST00000549416 FLNCQ14315 2725 aa1.51□□□□□ -2.17
PRDM4-204ENST00000549416 CENPEQ02224 2701 aa1.5□□□□□ -2.17
PRDM4-204ENST00000549416 F8P00451 2351 aa1.5□□□□□ -2.17
PRDM4-204ENST00000549416 JMJD1CQ15652 2540 aa1.49□□□□□ -2.17
PRDM4-204ENST00000549416 MAST4O15021 2626 aa1.49□□□□□ -2.17
PRDM4-204ENST00000549416 MMP24-AS1A0A0U1RRL7 71 aa1.49□□□□□ -2.17
PRDM4-204ENST00000549416 H3BNG1 76 aa1.49□□□□□ -2.17
PRDM4-204ENST00000549416 DEFB4AO15263 64 aa1.49□□□□□ -2.17
PRDM4-204ENST00000549416 TENM4Q6N022 2769 aa1.49□□□□□ -2.17
PRDM4-204ENST00000549416 ITPR3Q14573 2671 aa1.49□□□□□ -2.17
PRDM4-204ENST00000549416 FLNAP21333 2647 aaKnown RBP1.49□□□□□ -2.17
PRDM4-204ENST00000549416 MTORP42345 2549 aa1.48□□□□□ -2.17
PRDM4-204ENST00000549416 UTP20O75691 2785 aaKnown RBP1.48□□□□□ -2.17
PRDM4-204ENST00000549416 SPRR1BP22528 89 aa1.48□□□□□ -2.17
PRDM4-204ENST00000549416 SONP18583 2426 aaKnown RBP1.48□□□□□ -2.17
PRDM4-204ENST00000549416 SVEP1Q4LDE5 3571 aa1.48□□□□□ -2.17
PRDM4-204ENST00000549416 APCP25054 2843 aa1.48□□□□□ -2.17
PRDM4-204ENST00000549416 C2CD3Q4AC94 2353 aa1.47□□□□□ -2.17
PRDM4-204ENST00000549416 TEX15Q9BXT5 2789 aa1.47□□□□□ -2.17
PRDM4-204ENST00000549416 A0A096LPF7 62 aa1.47□□□□□ -2.17
PRDM4-204ENST00000549416 KRTAP4-1Q9BYQ7 146 aa1.47□□□□□ -2.17
PRDM4-204ENST00000549416 OTOGQ6ZRI0 2925 aa1.47□□□□□ -2.17
PRDM4-204ENST00000549416 FBN3Q75N90 2809 aa1.47□□□□□ -2.17
PRDM4-204ENST00000549416 CSMD1Q96PZ7 3565 aa1.47□□□□□ -2.17
PRDM4-204ENST00000549416 FBN2P35556 2912 aa1.46□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms