RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 IGLC6P0CF74 106 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 IL7P13232 177 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 HIST1H1DP16402 221 aaKnown RBP-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 SNCAP37840 140 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 ELOF1P60002 83 aaKnown RBP-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 CKS1BP61024 79 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 RRAS2P62070 204 aaPredicted RBP-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 NCS1P62166 190 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 SELENOWP63302 87 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 TMEM244Q5VVB8 128 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 C12orf73Q69YU5 71 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 PPP1R2P3Q6NXS1 205 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 SCP2D1Q9UJQ7 156 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 ERG28Q9UKR5 140 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 LENEPQ9Y5L5 61 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 TRBV27A0A0K0K1C4 114 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 C7orf77A4D0Y5 90 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 IGIPA6NJ69 53 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 IFITM5A6NNB3 132 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 CEBPZOSA8MTT3 80 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 HCG22E2RYF7 251 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 ZNF670-ZNF695F2Z2N8 137 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 I3L3M4 83 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 NDUFC1O43677 76 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 SSSCA1O60232 199 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 SIX6O95475 246 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 IGKCP01834 107 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 SMIM13P0DJ93 91 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 SLC25A6P12236 298 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 ADCYAP1P18509 176 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 S100A11P31949 105 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 C10orf113Q5VZT2 155 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 Q6JHZ5 121 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 TMEM91Q6ZNR0 172 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 KCNRGQ8N5I3 272 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 FAM213BQ8TBF2 198 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 COX7B2Q8TF08 81 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 LZICQ8WZA0 190 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 MAGOHBQ96A72 148 aaKnown RBP-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 DMAC1Q96GE9 116 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 TSC22D3Q99576 134 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 SMIM7Q9BQ49 75 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 PSMG3Q9BT73 122 aaPredicted RBP-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 TP53AIP1Q9HCN2 124 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 CCDC167Q9P0B6 97 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 LAMTOR2Q9Y2Q5 125 aa-0.23□□□□□ -2.45
CCDC38-206ENST00000548771 TRAV1-2A0A0B4J238 106 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 TRBV7-6A0A0J9YX20 115 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 TRBV7-4A0A0J9YYF1 115 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 H3BQF6 201 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 K7EMI3 77 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 IFNGP01579 166 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 C3orf79P0CE67 100 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 COX7BP24311 80 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 RPS25P62851 125 aaKnown RBP-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 PPP3R1P63098 170 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 CATR1Q13166 79 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 SPANXN1Q5VSR9 72 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 TMEM141Q96I45 108 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 DSCR8Q96T75 97 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 MRPL34Q9BQ48 92 aaKnown RBP-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 SMIM2Q9BVW6 85 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 NMES1Q9C002 83 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 TMEM191AQ9H0A3 160 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 ATG5Q9H1Y0 275 aa-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 PAIP2BQ9ULR5 123 aaKnown RBP-0.24□□□□□ -2.45
CCDC38-206ENST00000548771 UBE2L5PA0A1B0GUS4 154 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 A0A1B0GV72 72 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 MAP1LC3B2A6NCE7 125 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 ZNF815PA8K554 130 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 H3BMG7 143 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 HMGN1P05114 100 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 FABP1P07148 127 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 LINC00158P58513 81 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 ARPC4P59998 168 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 NPC2P61916 151 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 UBE2L3P68036 154 aaKnown RBP-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 DR1Q01658 176 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 COX17Q14061 63 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 SMCO1Q147U7 214 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 CCDC153Q494R4 210 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 RPL13AP3Q6NVV1 102 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 MUSTN1Q8IVN3 82 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 C20orf197Q8N268 126 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 C9orf62Q8N4C0 152 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 ACBD7Q8N6N7 88 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 S100A13Q99584 98 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 HOPXQ9BPY8 73 aaPredicted RBP-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 C20orf78Q9BR46 151 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 FAM107BQ9H098 131 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 CYP4F30PQ9H0H9 118 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 ST20Q9HBF5 79 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 SPANXA1Q9NS26 97 aa-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 LSM2Q9Y333 95 aaKnown RBP-0.25□□□□□ -2.45
CCDC38-206ENST00000548771 TRAV13-2A0A0B4J235 113 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 PFDN1O60925 122 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 SFT2D2O95562 160 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 CCKP06307 115 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 IGLC3P0DOY3 106 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 GCHFRP30047 84 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms