RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 DNHD1Q96M86 4753 aa13.73□□□□□ -0.21
NPAS3-206ENST00000548645 Q6ZRN7 208 aaPredicted RBP13.73□□□□□ -0.21
NPAS3-206ENST00000548645 COL7A1Q02388 2944 aa13.72□□□□□ -0.21
NPAS3-206ENST00000548645 PRR26Q8N8Z3 221 aa13.72□□□□□ -0.21
NPAS3-206ENST00000548645 CSMD3Q7Z407 3707 aa13.69□□□□□ -0.22
NPAS3-206ENST00000548645 Q5W150 140 aa13.69□□□□□ -0.22
NPAS3-206ENST00000548645 ANAPC11Q9NYG5 84 aa13.69□□□□□ -0.22
NPAS3-206ENST00000548645 PSORS1C2Q9UIG4 136 aa13.68□□□□□ -0.22
NPAS3-206ENST00000548645 ACYP2P14621 99 aa13.67□□□□□ -0.22
NPAS3-206ENST00000548645 KRTAP13-3Q3SY46 172 aa13.67□□□□□ -0.22
NPAS3-206ENST00000548645 IGLV5-52A0A0A0MRZ9 124 aa13.67□□□□□ -0.22
NPAS3-206ENST00000548645 SPINK6Q6UWN8 80 aa13.65□□□□□ -0.22
NPAS3-206ENST00000548645 ZNF861PO60384 105 aa13.65□□□□□ -0.22
NPAS3-206ENST00000548645 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
NPAS3-206ENST00000548645 A0A087WTM6 91 aa13.55□□□□□ -0.24
NPAS3-206ENST00000548645 C8orf87E5RJ46 101 aa13.54□□□□□ -0.24
NPAS3-206ENST00000548645 DMAC1Q96GE9 116 aa13.54□□□□□ -0.24
NPAS3-206ENST00000548645 DNAH7Q8WXX0 4024 aa13.53□□□□□ -0.24
NPAS3-206ENST00000548645 MEGF8Q7Z7M0 2845 aa13.52□□□□□ -0.25
NPAS3-206ENST00000548645 RTL8CO15255 209 aa13.51□□□□□ -0.25
NPAS3-206ENST00000548645 CIRBP-AS1Q8TBR5 109 aa13.5□□□□□ -0.25
NPAS3-206ENST00000548645 NUPR2A6NF83 97 aa13.5□□□□□ -0.25
NPAS3-206ENST00000548645 ALMS1Q8TCU4 4167 aa13.47□□□□□ -0.25
NPAS3-206ENST00000548645 DNAH8Q96JB1 4490 aa13.46□□□□□ -0.26
NPAS3-206ENST00000548645 A0A1B0GU69 56 aa13.45□□□□□ -0.26
NPAS3-206ENST00000548645 FAM229AH3BQW9 127 aa13.45□□□□□ -0.26
NPAS3-206ENST00000548645 PRKDCP78527 4128 aaKnown RBP13.45□□□□□ -0.26
NPAS3-206ENST00000548645 LINC00313P59037 77 aa13.44□□□□□ -0.26
NPAS3-206ENST00000548645 PLECQ15149 4684 aaKnown RBP13.44□□□□□ -0.26
NPAS3-206ENST00000548645 IGLV7-43P04211 117 aa13.41□□□□□ -0.26
NPAS3-206ENST00000548645 SSBP3-AS1Q7Z2R9 100 aa13.41□□□□□ -0.26
NPAS3-206ENST00000548645 IGKV2-30P06310 120 aa13.37□□□□□ -0.27
NPAS3-206ENST00000548645 SPATA8Q6RVD6 105 aa13.37□□□□□ -0.27
NPAS3-206ENST00000548645 TGP01266 2768 aa13.37□□□□□ -0.27
NPAS3-206ENST00000548645 FRAS1Q86XX4 4008 aa13.35□□□□□ -0.27
NPAS3-206ENST00000548645 PLA2G1BP04054 148 aaKnown RBP13.34□□□□□ -0.27
NPAS3-206ENST00000548645 RETNLBQ9BQ08 111 aa13.34□□□□□ -0.27
NPAS3-206ENST00000548645 PRAC1Q96KF2 57 aa13.33□□□□□ -0.28
NPAS3-206ENST00000548645 HECTD4Q9Y4D8 3996 aa13.3□□□□□ -0.28
NPAS3-206ENST00000548645 FBN3Q75N90 2809 aa13.28□□□□□ -0.28
NPAS3-206ENST00000548645 UQCR11O14957 56 aa13.28□□□□□ -0.28
NPAS3-206ENST00000548645 MIR22HGQ0VDD5 57 aa13.28□□□□□ -0.28
NPAS3-206ENST00000548645 VPS13DQ5THJ4 4388 aa13.26□□□□□ -0.29
NPAS3-206ENST00000548645 ADM2Q7Z4H4 148 aa13.24□□□□□ -0.29
NPAS3-206ENST00000548645 DNAH17Q9UFH2 4485 aa13.21□□□□□ -0.29
NPAS3-206ENST00000548645 KRTAP16-1A8MUX0 517 aa13.18□□□□□ -0.3
NPAS3-206ENST00000548645 STARD9Q9P2P6 4700 aa13.16□□□□□ -0.3
NPAS3-206ENST00000548645 IGKV2D-30A0A075B6S6 120 aa13.15□□□□□ -0.3
NPAS3-206ENST00000548645 LINC01554Q52M75 96 aa13.11□□□□□ -0.31
NPAS3-206ENST00000548645 KRTAP13-2Q52LG2 175 aa13.11□□□□□ -0.31
NPAS3-206ENST00000548645 C1orf134Q5TEV5 83 aa13.11□□□□□ -0.31
NPAS3-206ENST00000548645 DNAH2Q9P225 4427 aa13.06□□□□□ -0.32
NPAS3-206ENST00000548645 KMT2AQ03164 3969 aa12.99□□□□□ -0.33
NPAS3-206ENST00000548645 KRTAP21-3Q3LHN1 58 aa12.96□□□□□ -0.33
NPAS3-206ENST00000548645 SPINK1P00995 79 aa12.92□□□□□ -0.34
NPAS3-206ENST00000548645 CSAG1Q6PB30 78 aa12.91□□□□□ -0.34
NPAS3-206ENST00000548645 DNAH11Q96DT5 4516 aa12.9□□□□□ -0.34
NPAS3-206ENST00000548645 KRTAP10-2P60368 255 aa12.88□□□□□ -0.35
NPAS3-206ENST00000548645 C4orf48Q5BLP8 95 aa12.88□□□□□ -0.35
NPAS3-206ENST00000548645 KRTAP1-4P0C5Y4 121 aa12.86□□□□□ -0.35
NPAS3-206ENST00000548645 Q8N1X5 172 aa12.85□□□□□ -0.35
NPAS3-206ENST00000548645 LY6G6CO95867 125 aa12.82□□□□□ -0.36
NPAS3-206ENST00000548645 DNAH6Q9C0G6 4158 aa12.81□□□□□ -0.36
NPAS3-206ENST00000548645 Q6ZSA8 131 aa12.79□□□□□ -0.36
NPAS3-206ENST00000548645 DNAH5Q8TE73 4624 aa12.78□□□□□ -0.36
NPAS3-206ENST00000548645 TYMSOSQ8TAI1 123 aa12.76□□□□□ -0.37
NPAS3-206ENST00000548645 KRTAP10-1P60331 282 aa12.74□□□□□ -0.37
NPAS3-206ENST00000548645 LRP1BQ9NZR2 4599 aa12.69□□□□□ -0.38
NPAS3-206ENST00000548645 H0YAA0 97 aa12.68□□□□□ -0.38
NPAS3-206ENST00000548645 A8MUU9 505 aa12.66□□□□□ -0.38
NPAS3-206ENST00000548645 HYDINQ4G0P3 5121 aa12.64□□□□□ -0.39
NPAS3-206ENST00000548645 A0A1B0GU33 70 aa12.6□□□□□ -0.39
NPAS3-206ENST00000548645 RPS29P62273 56 aaKnown RBP12.58□□□□□ -0.4
NPAS3-206ENST00000548645 LINC00304Q8N9R0 145 aa12.57□□□□□ -0.4
NPAS3-206ENST00000548645 KRTAP25-1Q3LHN0 102 aa12.53□□□□□ -0.4
NPAS3-206ENST00000548645 H1FX-AS1Q4G0G2 97 aa12.52□□□□□ -0.4
NPAS3-206ENST00000548645 VPS13BQ7Z7G8 4022 aa12.52□□□□□ -0.41
NPAS3-206ENST00000548645 H3BS24 57 aa12.48□□□□□ -0.41
NPAS3-206ENST00000548645 KRTAP3-1Q9BYR8 98 aa12.48□□□□□ -0.41
NPAS3-206ENST00000548645 C20orf166-AS1Q96NR2 134 aa12.48□□□□□ -0.41
NPAS3-206ENST00000548645 PKD1P98161 4303 aa12.47□□□□□ -0.41
NPAS3-206ENST00000548645 C9orf92A6NGG3 77 aa12.43□□□□□ -0.42
NPAS3-206ENST00000548645 SACSQ9NZJ4 4579 aa12.39□□□□□ -0.43
NPAS3-206ENST00000548645 K7ERS5 55 aa12.37□□□□□ -0.43
NPAS3-206ENST00000548645 FAT2Q9NYQ8 4349 aa12.35□□□□□ -0.43
NPAS3-206ENST00000548645 KMT2CQ8NEZ4 4911 aaKnown RBP12.3□□□□□ -0.44
NPAS3-206ENST00000548645 ROMO1P60602 79 aa12.29□□□□□ -0.44
NPAS3-206ENST00000548645 COX6B2Q6YFQ2 88 aa12.27□□□□□ -0.45
NPAS3-206ENST00000548645 PKHD1P08F94 4074 aa12.22□□□□□ -0.45
NPAS3-206ENST00000548645 CRIPTQ9P021 101 aa12.17□□□□□ -0.46
NPAS3-206ENST00000548645 FLG2Q5D862 2391 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-206ENST00000548645 RYR2Q92736 4967 aa12.13□□□□□ -0.47
NPAS3-206ENST00000548645 SMR3BP02814 79 aaPredicted RBP12.11□□□□□ -0.47
NPAS3-206ENST00000548645 RPL37P61927 97 aaKnown RBP12.06□□□□□ -0.48
NPAS3-206ENST00000548645 PKHD1L1Q86WI1 4243 aa12.05□□□□□ -0.48
NPAS3-206ENST00000548645 DYNC1H1Q14204 4646 aaKnown RBP12.01□□□□□ -0.49
NPAS3-206ENST00000548645 KRTAP10-6P60371 365 aaPredicted RBP11.99□□□□□ -0.49
NPAS3-206ENST00000548645 RYR3Q15413 4870 aa11.97□□□□□ -0.49
NPAS3-206ENST00000548645 KRTAP10-4P60372 401 aaPredicted RBP11.93□□□□□ -0.5
NPAS3-206ENST00000548645 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms