RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 LCA10Q71F78 164 aa5.87□□□□□ -1.47
SMARCD1-205ENST00000548573 HRES1P13985 223 aa5.86□□□□□ -1.47
SMARCD1-205ENST00000548573 ATP11AUNQ6ZP68 121 aa5.86□□□□□ -1.47
SMARCD1-205ENST00000548573 A0A087X002 238 aa5.86□□□□□ -1.47
SMARCD1-205ENST00000548573 RTL8CO15255 209 aa5.86□□□□□ -1.47
SMARCD1-205ENST00000548573 NOTCH2NLQ7Z3S9 236 aa5.86□□□□□ -1.47
SMARCD1-205ENST00000548573 SPAG11AQ6PDA7 123 aa5.85□□□□□ -1.47
SMARCD1-205ENST00000548573 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
SMARCD1-205ENST00000548573 ANAPC11Q9NYG5 84 aa5.84□□□□□ -1.47
SMARCD1-205ENST00000548573 DNAH8Q96JB1 4490 aa5.84□□□□□ -1.48
SMARCD1-205ENST00000548573 KRTAP13-3Q3SY46 172 aa5.83□□□□□ -1.48
SMARCD1-205ENST00000548573 VPS13DQ5THJ4 4388 aa5.82□□□□□ -1.48
SMARCD1-205ENST00000548573 SPTSSBQ8NFR3 76 aa5.81□□□□□ -1.48
SMARCD1-205ENST00000548573 Q5W150 140 aa5.81□□□□□ -1.48
SMARCD1-205ENST00000548573 C8orf87E5RJ46 101 aa5.8□□□□□ -1.48
SMARCD1-205ENST00000548573 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
SMARCD1-205ENST00000548573 MGAM2Q2M2H8 2515 aa5.8□□□□□ -1.48
SMARCD1-205ENST00000548573 IGLV7-43P04211 117 aa5.79□□□□□ -1.48
SMARCD1-205ENST00000548573 SPINK6Q6UWN8 80 aa5.79□□□□□ -1.48
SMARCD1-205ENST00000548573 A6NN06 94 aa5.78□□□□□ -1.48
SMARCD1-205ENST00000548573 DNAH17Q9UFH2 4485 aa5.78□□□□□ -1.48
SMARCD1-205ENST00000548573 SSBP3-AS1Q7Z2R9 100 aa5.78□□□□□ -1.48
SMARCD1-205ENST00000548573 ACYP2P14621 99 aa5.77□□□□□ -1.49
SMARCD1-205ENST00000548573 CIRBP-AS1Q8TBR5 109 aa5.77□□□□□ -1.49
SMARCD1-205ENST00000548573 SPINK7P58062 85 aa5.76□□□□□ -1.49
SMARCD1-205ENST00000548573 STARD9Q9P2P6 4700 aa5.75□□□□□ -1.49
SMARCD1-205ENST00000548573 PRR26Q8N8Z3 221 aa5.75□□□□□ -1.49
SMARCD1-205ENST00000548573 FRAS1Q86XX4 4008 aa5.74□□□□□ -1.49
SMARCD1-205ENST00000548573 HECTD4Q9Y4D8 3996 aa5.74□□□□□ -1.49
SMARCD1-205ENST00000548573 DMAC1Q96GE9 116 aa5.73□□□□□ -1.49
SMARCD1-205ENST00000548573 DNAH2Q9P225 4427 aa5.73□□□□□ -1.49
SMARCD1-205ENST00000548573 FAM229AH3BQW9 127 aa5.73□□□□□ -1.49
SMARCD1-205ENST00000548573 LINC00313P59037 77 aa5.72□□□□□ -1.49
SMARCD1-205ENST00000548573 C1orf134Q5TEV5 83 aa5.72□□□□□ -1.49
SMARCD1-205ENST00000548573 PRKDCP78527 4128 aaKnown RBP5.72□□□□□ -1.49
SMARCD1-205ENST00000548573 IGKV2-30P06310 120 aa5.69□□□□□ -1.5
SMARCD1-205ENST00000548573 C4orf48Q5BLP8 95 aa5.68□□□□□ -1.5
SMARCD1-205ENST00000548573 C7orf65Q6ZTY9 151 aa5.68□□□□□ -1.5
SMARCD1-205ENST00000548573 ALMS1Q8TCU4 4167 aa5.68□□□□□ -1.5
SMARCD1-205ENST00000548573 RBM12B-AS1Q9P1G2 102 aa5.67□□□□□ -1.5
SMARCD1-205ENST00000548573 FBN3Q75N90 2809 aa5.66□□□□□ -1.5
SMARCD1-205ENST00000548573 KRTAP16-1A8MUX0 517 aa5.65□□□□□ -1.5
SMARCD1-205ENST00000548573 KMT2AQ03164 3969 aa5.65□□□□□ -1.5
SMARCD1-205ENST00000548573 KRTAP13-2Q52LG2 175 aa5.65□□□□□ -1.51
SMARCD1-205ENST00000548573 A0A1B0GU69 56 aa5.63□□□□□ -1.51
SMARCD1-205ENST00000548573 RETNLBQ9BQ08 111 aa5.63□□□□□ -1.51
SMARCD1-205ENST00000548573 DNAH11Q96DT5 4516 aa5.62□□□□□ -1.51
SMARCD1-205ENST00000548573 KRTAP10-2P60368 255 aa5.61□□□□□ -1.51
SMARCD1-205ENST00000548573 LY6G6CO95867 125 aa5.6□□□□□ -1.51
SMARCD1-205ENST00000548573 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
SMARCD1-205ENST00000548573 Q6ZSA8 131 aa5.6□□□□□ -1.51
SMARCD1-205ENST00000548573 DNAH5Q8TE73 4624 aa5.59□□□□□ -1.51
SMARCD1-205ENST00000548573 KRTAP21-3Q3LHN1 58 aa5.59□□□□□ -1.51
SMARCD1-205ENST00000548573 MEGF8Q7Z7M0 2845 aa5.59□□□□□ -1.51
SMARCD1-205ENST00000548573 KRTAP1-4P0C5Y4 121 aa5.58□□□□□ -1.52
SMARCD1-205ENST00000548573 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
SMARCD1-205ENST00000548573 UQCR11O14957 56 aa5.56□□□□□ -1.52
SMARCD1-205ENST00000548573 DNAH6Q9C0G6 4158 aa5.56□□□□□ -1.52
SMARCD1-205ENST00000548573 KRTAP10-1P60331 282 aa5.55□□□□□ -1.52
SMARCD1-205ENST00000548573 PLA2G1BP04054 148 aaKnown RBP5.54□□□□□ -1.52
SMARCD1-205ENST00000548573 MIR22HGQ0VDD5 57 aa5.54□□□□□ -1.52
SMARCD1-205ENST00000548573 DNHD1Q96M86 4753 aa5.54□□□□□ -1.52
SMARCD1-205ENST00000548573 LRP1BQ9NZR2 4599 aa5.53□□□□□ -1.52
SMARCD1-205ENST00000548573 TGP01266 2768 aa5.53□□□□□ -1.52
SMARCD1-205ENST00000548573 SPINK1P00995 79 aa5.52□□□□□ -1.53
SMARCD1-205ENST00000548573 TYMSOSQ8TAI1 123 aa5.51□□□□□ -1.53
SMARCD1-205ENST00000548573 PKD1P98161 4303 aa5.48□□□□□ -1.53
SMARCD1-205ENST00000548573 RPS29P62273 56 aaKnown RBP5.47□□□□□ -1.53
SMARCD1-205ENST00000548573 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
SMARCD1-205ENST00000548573 ADM2Q7Z4H4 148 aa5.45□□□□□ -1.54
SMARCD1-205ENST00000548573 FAT2Q9NYQ8 4349 aa5.44□□□□□ -1.54
SMARCD1-205ENST00000548573 Q8N1X5 172 aa5.43□□□□□ -1.54
SMARCD1-205ENST00000548573 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
SMARCD1-205ENST00000548573 VPS13BQ7Z7G8 4022 aa5.41□□□□□ -1.54
SMARCD1-205ENST00000548573 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
SMARCD1-205ENST00000548573 C20orf166-AS1Q96NR2 134 aa5.38□□□□□ -1.55
SMARCD1-205ENST00000548573 A8MUU9 505 aa5.37□□□□□ -1.55
SMARCD1-205ENST00000548573 SACSQ9NZJ4 4579 aa5.37□□□□□ -1.55
SMARCD1-205ENST00000548573 HYDINQ4G0P3 5121 aa5.37□□□□□ -1.55
SMARCD1-205ENST00000548573 H0YAA0 97 aa5.33□□□□□ -1.56
SMARCD1-205ENST00000548573 CSAG1Q6PB30 78 aa5.32□□□□□ -1.56
SMARCD1-205ENST00000548573 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
SMARCD1-205ENST00000548573 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
SMARCD1-205ENST00000548573 H3BS24 57 aa5.32□□□□□ -1.56
SMARCD1-205ENST00000548573 A0A1B0GU33 70 aa5.3□□□□□ -1.56
SMARCD1-205ENST00000548573 H1FX-AS1Q4G0G2 97 aa5.28□□□□□ -1.56
SMARCD1-205ENST00000548573 PKHD1L1Q86WI1 4243 aa5.26□□□□□ -1.57
SMARCD1-205ENST00000548573 SMR3BP02814 79 aaPredicted RBP5.25□□□□□ -1.57
SMARCD1-205ENST00000548573 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
SMARCD1-205ENST00000548573 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
SMARCD1-205ENST00000548573 APOBP04114 4563 aaKnown RBP5.23□□□□□ -1.57
SMARCD1-205ENST00000548573 DYNC1H1Q14204 4646 aaKnown RBP5.22□□□□□ -1.57
SMARCD1-205ENST00000548573 PKHD1P08F94 4074 aa5.22□□□□□ -1.57
SMARCD1-205ENST00000548573 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
SMARCD1-205ENST00000548573 A0A1B0GVY2 172 aa5.19□□□□□ -1.58
SMARCD1-205ENST00000548573 K7ERS5 55 aa5.17□□□□□ -1.58
SMARCD1-205ENST00000548573 FAT1Q14517 4588 aa5.17□□□□□ -1.58
SMARCD1-205ENST00000548573 LCE2BO14633 110 aa5.17□□□□□ -1.58
SMARCD1-205ENST00000548573 A0A0A0MQY5 61 aa5.13□□□□□ -1.59
SMARCD1-205ENST00000548573 J3QL48 77 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms