RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 NAT8BQ9UHF3 227 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 LAMTOR2Q9Y2Q5 125 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 V9GYV3 84 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 A0A1B0GXF2 115 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 SMIM27A0A1W2PRY6 76 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 C11orf86A6NJI1 115 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 LINC00587B1AMM8 73 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 H0YAA0 97 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 S100A8P05109 93 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 MT1GP13640 62 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 KRTAP12-1P59990 96 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 CSAG1Q6PB30 78 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 COMMD7Q86VX2 200 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 SIGMAR1Q99720 223 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 MAP1LC3CQ9BXW4 147 aa0.74□□□□□ -2.29
DEPDC4-204ENST00000547823 A0A087WSZ3 146 aa0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 TRAV13-2A0A0B4J235 113 aa0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 TEX46H3BTG2 121 aa0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 C3orf79P0CE67 100 aa0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 RHEBQ15382 184 aa0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 OCIAD2Q56VL3 154 aa0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 TMEM170BQ5T4T1 132 aa0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 MRPL54Q6P161 138 aaKnown RBP0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 MT1MQ8N339 61 aa0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 MIEN1Q9BRT3 115 aa0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 NHP2Q9NX24 153 aaKnown RBP0.73□□□□□ -2.29
DEPDC4-204ENST00000547823 TRBV7-6A0A0J9YX20 115 aa0.72□□□□□ -2.29
DEPDC4-204ENST00000547823 LINC01549A6NIU2 74 aa0.72□□□□□ -2.29
DEPDC4-204ENST00000547823 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
DEPDC4-204ENST00000547823 TMEM250H0YL14 139 aa0.72□□□□□ -2.29
DEPDC4-204ENST00000547823 PDE6GP18545 87 aa0.72□□□□□ -2.29
DEPDC4-204ENST00000547823 CEBPGP53567 150 aa0.72□□□□□ -2.29
DEPDC4-204ENST00000547823 OR13C6PQ8NH95 151 aa0.72□□□□□ -2.29
DEPDC4-204ENST00000547823 BATF3Q9NR55 127 aa0.72□□□□□ -2.29
DEPDC4-204ENST00000547823 IGHV6-1A0A0B4J1U7 121 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 IGKV3D-7A0A0C4DH55 119 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 MYMXA0A1B0GTQ4 84 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 A8MUN3 132 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 ARPC5O15511 151 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 HBDP02042 147 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 NPC2P61916 151 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 KRTAP25-1Q3LHN0 102 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 ATP5L2Q7Z4Y8 100 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 SLC7A5P1Q8MH63 180 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 DSCR8Q96T75 97 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 SMIM7Q9BQ49 75 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 SPANXDQ9BXN6 97 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 S4R3F8 94 aa0.71□□□□□ -2.3
DEPDC4-204ENST00000547823 LINC01546A6NGU7 62 aa0.7□□□□□ -2.3
DEPDC4-204ENST00000547823 C8orf87E5RJ46 101 aa0.7□□□□□ -2.3
DEPDC4-204ENST00000547823 H3BUT2 72 aa0.7□□□□□ -2.3
DEPDC4-204ENST00000547823 PSPHP1O15172 72 aa0.7□□□□□ -2.3
DEPDC4-204ENST00000547823 IFITM2Q01629 132 aa0.7□□□□□ -2.3
DEPDC4-204ENST00000547823 LYRM7Q5U5X0 104 aa0.7□□□□□ -2.3
DEPDC4-204ENST00000547823 TEN1Q86WV5 123 aa0.7□□□□□ -2.3
DEPDC4-204ENST00000547823 BAGE3Q86Y29 109 aa0.7□□□□□ -2.3
DEPDC4-204ENST00000547823 TSPEAR-AS2P59090 65 aa0.69□□□□□ -2.3
DEPDC4-204ENST00000547823 ADIRFQ15847 76 aa0.69□□□□□ -2.3
DEPDC4-204ENST00000547823 SPANXCQ9NY87 97 aa0.69□□□□□ -2.3
DEPDC4-204ENST00000547823 KANTRA0A1W2PQU2 76 aa0.68□□□□□ -2.3
DEPDC4-204ENST00000547823 C9JQL5 133 aa0.68□□□□□ -2.3
DEPDC4-204ENST00000547823 H3BQ85 93 aa0.68□□□□□ -2.3
DEPDC4-204ENST00000547823 C4orf26Q17RF5 130 aa0.68□□□□□ -2.3
DEPDC4-204ENST00000547823 Q6ZQY7 126 aa0.68□□□□□ -2.3
DEPDC4-204ENST00000547823 LINC00308Q8TCZ7 52 aa0.68□□□□□ -2.3
DEPDC4-204ENST00000547823 RAB37Q96AX2 223 aa0.68□□□□□ -2.3
DEPDC4-204ENST00000547823 SNHG12Q9BXW3 62 aa0.68□□□□□ -2.3
DEPDC4-204ENST00000547823 LINC00472Q9H8W2 130 aa0.68□□□□□ -2.3
DEPDC4-204ENST00000547823 SMLR1H3BR10 107 aa0.67□□□□□ -2.3
DEPDC4-204ENST00000547823 K7EQZ3 153 aa0.67□□□□□ -2.3
DEPDC4-204ENST00000547823 LEPROTO15243 131 aa0.67□□□□□ -2.3
DEPDC4-204ENST00000547823 SRP19P09132 144 aaKnown RBP0.67□□□□□ -2.3
DEPDC4-204ENST00000547823 C7orf65Q6ZTY9 151 aa0.67□□□□□ -2.3
DEPDC4-204ENST00000547823 PPDPFLQ8WWR9 84 aa0.67□□□□□ -2.3
DEPDC4-204ENST00000547823 MT1LQ93083 61 aa0.67□□□□□ -2.3
DEPDC4-204ENST00000547823 SMCO4Q9NRQ5 59 aa0.67□□□□□ -2.3
DEPDC4-204ENST00000547823 NAT8Q9UHE5 227 aa0.67□□□□□ -2.3
DEPDC4-204ENST00000547823 TRAV12-1A0A0B4J245 112 aa0.66□□□□□ -2.3
DEPDC4-204ENST00000547823 hADV29S1A0JD25 119 aa0.66□□□□□ -2.3
DEPDC4-204ENST00000547823 J3QQQ9 107 aa0.66□□□□□ -2.3
DEPDC4-204ENST00000547823 KRTAP19-5Q3LI72 72 aa0.66□□□□□ -2.3
DEPDC4-204ENST00000547823 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.66□□□□□ -2.3
DEPDC4-204ENST00000547823 LINC00575Q6W349 94 aa0.66□□□□□ -2.3
DEPDC4-204ENST00000547823 S100ZQ8WXG8 99 aa0.66□□□□□ -2.3
DEPDC4-204ENST00000547823 PMCHL1Q16048 86 aa0.65□□□□□ -2.31
DEPDC4-204ENST00000547823 C2orf91Q6ZV80 131 aa0.65□□□□□ -2.31
DEPDC4-204ENST00000547823 SMIM11BQ8TCY0 68 aa0.65□□□□□ -2.31
DEPDC4-204ENST00000547823 TRAPPC1Q9Y5R8 145 aa0.65□□□□□ -2.31
DEPDC4-204ENST00000547823 TIMM17BO60830 172 aa0.64□□□□□ -2.31
DEPDC4-204ENST00000547823 LINC00614P0C842 121 aa0.64□□□□□ -2.31
DEPDC4-204ENST00000547823 VAMP3Q15836 100 aa0.64□□□□□ -2.31
DEPDC4-204ENST00000547823 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
DEPDC4-204ENST00000547823 TRBV7-4A0A0J9YYF1 115 aa0.63□□□□□ -2.31
DEPDC4-204ENST00000547823 A0A1B0GU33 70 aa0.63□□□□□ -2.31
DEPDC4-204ENST00000547823 H3BMG7 143 aa0.63□□□□□ -2.31
DEPDC4-204ENST00000547823 LINC01554Q52M75 96 aa0.63□□□□□ -2.31
DEPDC4-204ENST00000547823 IFI27L1Q96BM0 104 aa0.63□□□□□ -2.31
DEPDC4-204ENST00000547823 A0A087WVE0 104 aa0.62□□□□□ -2.31
DEPDC4-204ENST00000547823 J3KT08 172 aa0.62□□□□□ -2.31
DEPDC4-204ENST00000547823 M0QZ58 72 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms