RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 LINC00208Q96KT6 92 aa10.11□□□□□ -0.79
BRF1-208ENST00000546997 IGFL1Q6UW32 110 aa10.1□□□□□ -0.79
BRF1-208ENST00000546997 CIRBP-AS1Q8TBR5 109 aa10.1□□□□□ -0.79
BRF1-208ENST00000546997 Q8N9P0 234 aaPredicted RBP10.1□□□□□ -0.79
BRF1-208ENST00000546997 PRLHP81277 87 aa10.09□□□□□ -0.79
BRF1-208ENST00000546997 APOBP04114 4563 aaKnown RBP10.08□□□□□ -0.8
BRF1-208ENST00000546997 PRR4Q16378 134 aa10.07□□□□□ -0.8
BRF1-208ENST00000546997 H0Y9P7 68 aa10.06□□□□□ -0.8
BRF1-208ENST00000546997 WFDC13Q8IUB5 93 aa10.06□□□□□ -0.8
BRF1-208ENST00000546997 SRRM2Q9UQ35 2752 aaKnown RBP10.05□□□□□ -0.8
BRF1-208ENST00000546997 LOC101927531A0A1B0GV80 90 aa10.05□□□□□ -0.8
BRF1-208ENST00000546997 H0Y9J4 135 aa10.04□□□□□ -0.8
BRF1-208ENST00000546997 CASC2Q6XLA1 102 aa10.04□□□□□ -0.8
BRF1-208ENST00000546997 Q75L30 129 aa10.03□□□□□ -0.8
BRF1-208ENST00000546997 ATP11AUNQ6ZP68 121 aa10.03□□□□□ -0.8
BRF1-208ENST00000546997 A0A087WSZ3 146 aa10.02□□□□□ -0.81
BRF1-208ENST00000546997 A8MWP4 228 aa10.01□□□□□ -0.81
BRF1-208ENST00000546997 CHKB-CPT1BH3BT56 60 aa10.01□□□□□ -0.81
BRF1-208ENST00000546997 VPS13BQ7Z7G8 4022 aa10□□□□□ -0.81
BRF1-208ENST00000546997 PSORS1C2Q9UIG4 136 aa10□□□□□ -0.81
BRF1-208ENST00000546997 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
BRF1-208ENST00000546997 KTN1-AS1Q86SY8 53 aa9.99□□□□□ -0.81
BRF1-208ENST00000546997 SPRR1BP22528 89 aa9.99□□□□□ -0.81
BRF1-208ENST00000546997 NDUFS5O43920 106 aa9.97□□□□□ -0.81
BRF1-208ENST00000546997 PRR15LQ9BU68 103 aa9.97□□□□□ -0.81
BRF1-208ENST00000546997 LINC00472Q9H8W2 130 aa9.97□□□□□ -0.81
BRF1-208ENST00000546997 DEFB116Q30KQ4 102 aa9.95□□□□□ -0.82
BRF1-208ENST00000546997 KRTAP13-1Q8IUC0 172 aa9.95□□□□□ -0.82
BRF1-208ENST00000546997 FAT1Q14517 4588 aa9.94□□□□□ -0.82
BRF1-208ENST00000546997 RPL37AP61513 92 aaKnown RBP9.93□□□□□ -0.82
BRF1-208ENST00000546997 COA5Q86WW8 74 aa9.93□□□□□ -0.82
BRF1-208ENST00000546997 TP53AIP1Q9HCN2 124 aa9.92□□□□□ -0.82
BRF1-208ENST00000546997 LCE2CQ5TA81 110 aa9.92□□□□□ -0.82
BRF1-208ENST00000546997 CDC42SE1Q9NRR8 79 aa9.91□□□□□ -0.82
BRF1-208ENST00000546997 RYR1P21817 5038 aa9.91□□□□□ -0.82
BRF1-208ENST00000546997 HSPG2P98160 4391 aa9.91□□□□□ -0.82
BRF1-208ENST00000546997 KIAA1109Q2LD37 5005 aa9.9□□□□□ -0.82
BRF1-208ENST00000546997 A0A0G2JQZ4 141 aa9.9□□□□□ -0.83
BRF1-208ENST00000546997 LCA10Q71F78 164 aa9.9□□□□□ -0.83
BRF1-208ENST00000546997 LINC01558Q9Y6Z2 57 aa9.9□□□□□ -0.83
BRF1-208ENST00000546997 MMP24-AS1A0A0U1RRL7 71 aa9.88□□□□□ -0.83
BRF1-208ENST00000546997 A6NED7 52 aa9.88□□□□□ -0.83
BRF1-208ENST00000546997 A8MU10 97 aa9.88□□□□□ -0.83
BRF1-208ENST00000546997 SMR3BP02814 79 aaPredicted RBP9.88□□□□□ -0.83
BRF1-208ENST00000546997 ASB16-AS1Q495Z4 193 aa9.88□□□□□ -0.83
BRF1-208ENST00000546997 LCE2AQ5TA79 106 aaPredicted RBP9.88□□□□□ -0.83
BRF1-208ENST00000546997 A6NN06 94 aa9.87□□□□□ -0.83
BRF1-208ENST00000546997 LCE2BO14633 110 aa9.87□□□□□ -0.83
BRF1-208ENST00000546997 IGLV7-43P04211 117 aa9.86□□□□□ -0.83
BRF1-208ENST00000546997 ZNF861PO60384 105 aa9.84□□□□□ -0.83
BRF1-208ENST00000546997 MOBPQ13875 183 aa9.84□□□□□ -0.83
BRF1-208ENST00000546997 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
BRF1-208ENST00000546997 CDK2AP2O75956 126 aa9.81□□□□□ -0.84
BRF1-208ENST00000546997 BIRC6Q9NR09 4857 aa9.81□□□□□ -0.84
BRF1-208ENST00000546997 RBM12B-AS1Q9P1G2 102 aa9.81□□□□□ -0.84
BRF1-208ENST00000546997 PRR26Q8N8Z3 221 aa9.8□□□□□ -0.84
BRF1-208ENST00000546997 LINC00483Q53H64 154 aa9.77□□□□□ -0.84
BRF1-208ENST00000546997 C7orf65Q6ZTY9 151 aa9.77□□□□□ -0.85
BRF1-208ENST00000546997 KRTAP10-4P60372 401 aaPredicted RBP9.76□□□□□ -0.85
BRF1-208ENST00000546997 ZNF706Q9Y5V0 76 aaPredicted RBP9.75□□□□□ -0.85
BRF1-208ENST00000546997 IGLV9-49A0A0B4J1Y8 123 aa9.72□□□□□ -0.85
BRF1-208ENST00000546997 SEC61BP60468 96 aaKnown RBP9.72□□□□□ -0.85
BRF1-208ENST00000546997 KRTAP17-1Q9BYP8 105 aa9.72□□□□□ -0.85
BRF1-208ENST00000546997 ANAPC11Q9NYG5 84 aa9.72□□□□□ -0.85
BRF1-208ENST00000546997 Q96NJ1 140 aa9.72□□□□□ -0.85
BRF1-208ENST00000546997 C8orf17Q9NRJ1 99 aa9.72□□□□□ -0.85
BRF1-208ENST00000546997 PCOTHQ58A44 107 aa9.7□□□□□ -0.86
BRF1-208ENST00000546997 SPAG11AQ6PDA7 123 aa9.7□□□□□ -0.86
BRF1-208ENST00000546997 HRES1P13985 223 aa9.68□□□□□ -0.86
BRF1-208ENST00000546997 Q5VSD8 79 aa9.67□□□□□ -0.86
BRF1-208ENST00000546997 PKHD1L1Q86WI1 4243 aa9.66□□□□□ -0.86
BRF1-208ENST00000546997 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
BRF1-208ENST00000546997 SPINK6Q6UWN8 80 aa9.66□□□□□ -0.86
BRF1-208ENST00000546997 KRTAP1-4P0C5Y4 121 aa9.64□□□□□ -0.87
BRF1-208ENST00000546997 MRPL34Q9BQ48 92 aaKnown RBP9.64□□□□□ -0.87
BRF1-208ENST00000546997 HERC2O95714 4834 aa9.63□□□□□ -0.87
BRF1-208ENST00000546997 SPINK7P58062 85 aa9.61□□□□□ -0.87
BRF1-208ENST00000546997 A0A087X002 238 aa9.61□□□□□ -0.87
BRF1-208ENST00000546997 Q8N1X5 172 aa9.61□□□□□ -0.87
BRF1-208ENST00000546997 KRTAP23-1A1A580 65 aa9.58□□□□□ -0.88
BRF1-208ENST00000546997 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
BRF1-208ENST00000546997 KRTAP13-2Q52LG2 175 aa9.56□□□□□ -0.88
BRF1-208ENST00000546997 LRP1Q07954 4544 aaKnown RBP9.56□□□□□ -0.88
BRF1-208ENST00000546997 IGHV6-1A0A0B4J1U7 121 aa9.55□□□□□ -0.88
BRF1-208ENST00000546997 ACYP2P14621 99 aa9.54□□□□□ -0.88
BRF1-208ENST00000546997 MYCBP2O75592 4640 aa9.52□□□□□ -0.89
BRF1-208ENST00000546997 ABCA13Q86UQ4 5058 aa9.51□□□□□ -0.89
BRF1-208ENST00000546997 KRTAP13-3Q3SY46 172 aa9.51□□□□□ -0.89
BRF1-208ENST00000546997 SSBP3-AS1Q7Z2R9 100 aa9.5□□□□□ -0.89
BRF1-208ENST00000546997 FAT3Q8TDW7 4589 aa9.49□□□□□ -0.89
BRF1-208ENST00000546997 KRTAP4-5Q9BYR2 181 aa9.48□□□□□ -0.89
BRF1-208ENST00000546997 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
BRF1-208ENST00000546997 TNXBP22105 4242 aa9.45□□□□□ -0.9
BRF1-208ENST00000546997 LORP23490 312 aaPredicted RBP9.44□□□□□ -0.9
BRF1-208ENST00000546997 TYMSOSQ8TAI1 123 aa9.44□□□□□ -0.9
BRF1-208ENST00000546997 LINC00313P59037 77 aa9.43□□□□□ -0.9
BRF1-208ENST00000546997 C8orf87E5RJ46 101 aa9.43□□□□□ -0.9
BRF1-208ENST00000546997 SPATA8Q6RVD6 105 aa9.42□□□□□ -0.9
BRF1-208ENST00000546997 Q5W150 140 aa9.4□□□□□ -0.9
BRF1-208ENST00000546997 NOTCH2NLQ7Z3S9 236 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms