RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 IGLV4-60A0A075B6I1 120 aa4.11□□□□□ -1.75
CCDC60-205ENST00000546345 Q6ZQY7 126 aa4.11□□□□□ -1.75
CCDC60-205ENST00000546345 SPANXA2-OT1Q8N9U9 137 aa4.11□□□□□ -1.75
CCDC60-205ENST00000546345 LIMD2Q9BT23 127 aa4.11□□□□□ -1.75
CCDC60-205ENST00000546345 IGKV4-1P06312 121 aa4.1□□□□□ -1.75
CCDC60-205ENST00000546345 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
CCDC60-205ENST00000546345 UBE2BP63146 152 aa4.1□□□□□ -1.75
CCDC60-205ENST00000546345 IGLV5-48A0A075B6I7 105 aa4.09□□□□□ -1.75
CCDC60-205ENST00000546345 ZNF73O43830 326 aaPredicted RBP4.09□□□□□ -1.75
CCDC60-205ENST00000546345 NDUFS5O43920 106 aa4.09□□□□□ -1.75
CCDC60-205ENST00000546345 ETDCA0A1B0GVM5 59 aa4.08□□□□□ -1.76
CCDC60-205ENST00000546345 M0R378 163 aa4.08□□□□□ -1.76
CCDC60-205ENST00000546345 NOTCH2NLQ7Z3S9 236 aa4.08□□□□□ -1.76
CCDC60-205ENST00000546345 MRPL55Q7Z7F7 128 aaKnown RBP4.08□□□□□ -1.76
CCDC60-205ENST00000546345 ZCCHC13Q8WW36 166 aaKnown RBP4.08□□□□□ -1.76
CCDC60-205ENST00000546345 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
CCDC60-205ENST00000546345 UBE2AP49459 152 aa4.07□□□□□ -1.76
CCDC60-205ENST00000546345 Q9BRP9 147 aa4.07□□□□□ -1.76
CCDC60-205ENST00000546345 LINC00474Q9P2X8 69 aa4.07□□□□□ -1.76
CCDC60-205ENST00000546345 HCG22E2RYF7 251 aa4.06□□□□□ -1.76
CCDC60-205ENST00000546345 PRR3P79522 188 aaKnown RBP4.06□□□□□ -1.76
CCDC60-205ENST00000546345 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
CCDC60-205ENST00000546345 CHCHD10Q8WYQ3 142 aaPredicted RBP4.06□□□□□ -1.76
CCDC60-205ENST00000546345 SPRR4Q96PI1 79 aa4.06□□□□□ -1.76
CCDC60-205ENST00000546345 DHRS4-AS1Q9P1J3 65 aa4.06□□□□□ -1.76
CCDC60-205ENST00000546345 A0A087X002 238 aa4.05□□□□□ -1.76
CCDC60-205ENST00000546345 MP68P56378 58 aa4.05□□□□□ -1.76
CCDC60-205ENST00000546345 REG3AQ06141 175 aa4.05□□□□□ -1.76
CCDC60-205ENST00000546345 SPAG11BQ08648 103 aa4.05□□□□□ -1.76
CCDC60-205ENST00000546345 C14orf177Q52M58 125 aa4.05□□□□□ -1.76
CCDC60-205ENST00000546345 C9orf163Q8N9P6 203 aa4.05□□□□□ -1.76
CCDC60-205ENST00000546345 PRR34Q9NV39 138 aa4.05□□□□□ -1.76
CCDC60-205ENST00000546345 IGKV3OR2-268A0A0C4DH90 116 aa4.04□□□□□ -1.76
CCDC60-205ENST00000546345 RPL37AP8A6NKH3 93 aa4.04□□□□□ -1.76
CCDC60-205ENST00000546345 CHTF8P0CG12 524 aa4.04□□□□□ -1.76
CCDC60-205ENST00000546345 PHF5AQ7RTV0 110 aaKnown RBP4.04□□□□□ -1.76
CCDC60-205ENST00000546345 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
CCDC60-205ENST00000546345 C1orf64Q8NEQ6 169 aa4.04□□□□□ -1.76
CCDC60-205ENST00000546345 KCNQ1DNQ9H478 68 aa4.04□□□□□ -1.76
CCDC60-205ENST00000546345 IGKV2D-24A0A075B6R9 120 aa4.03□□□□□ -1.76
CCDC60-205ENST00000546345 Q6ZRP5 223 aa4.03□□□□□ -1.76
CCDC60-205ENST00000546345 SPACA4Q8TDM5 124 aa4.03□□□□□ -1.76
CCDC60-205ENST00000546345 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
CCDC60-205ENST00000546345 TRAV22A0A0B4J277 110 aa4.02□□□□□ -1.77
CCDC60-205ENST00000546345 FAM229BQ4G0N7 80 aa4.02□□□□□ -1.77
CCDC60-205ENST00000546345 LOC101927531A0A1B0GV80 90 aa4.01□□□□□ -1.77
CCDC60-205ENST00000546345 ANGP03950 147 aaKnown RBP4.01□□□□□ -1.77
CCDC60-205ENST00000546345 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
CCDC60-205ENST00000546345 ASB16-AS1Q495Z4 193 aa4.01□□□□□ -1.77
CCDC60-205ENST00000546345 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
CCDC60-205ENST00000546345 LINC00269Q8N2A0 174 aa4.01□□□□□ -1.77
CCDC60-205ENST00000546345 Q8NBF4 154 aa4.01□□□□□ -1.77
CCDC60-205ENST00000546345 HIGD2AQ9BW72 106 aa4.01□□□□□ -1.77
CCDC60-205ENST00000546345 PLAC8Q9NZF1 115 aa4.01□□□□□ -1.77
CCDC60-205ENST00000546345 REG3GQ6UW15 175 aa4□□□□□ -1.77
CCDC60-205ENST00000546345 SPINK6Q6UWN8 80 aa4□□□□□ -1.77
CCDC60-205ENST00000546345 KLK12Q9UKR0 248 aa4□□□□□ -1.77
CCDC60-205ENST00000546345 TLX1NBP0CAT3 122 aa3.99□□□□□ -1.77
CCDC60-205ENST00000546345 UNQ6190/PRO20217Q6UXQ8 127 aa3.99□□□□□ -1.77
CCDC60-205ENST00000546345 KRTAP7-1Q8IUC3 87 aa3.99□□□□□ -1.77
CCDC60-205ENST00000546345 SYCNQ0VAF6 134 aa3.98□□□□□ -1.77
CCDC60-205ENST00000546345 KRTAP26-1Q6PEX3 210 aa3.98□□□□□ -1.77
CCDC60-205ENST00000546345 LINC00208Q96KT6 92 aa3.98□□□□□ -1.77
CCDC60-205ENST00000546345 CNBPP62633 177 aaKnown RBP3.97□□□□□ -1.77
CCDC60-205ENST00000546345 C1orf137Q5JT78 98 aa3.97□□□□□ -1.77
CCDC60-205ENST00000546345 C7orf33Q8WU49 177 aa3.97□□□□□ -1.77
CCDC60-205ENST00000546345 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
CCDC60-205ENST00000546345 C6orf48Q9UBA6 75 aa3.97□□□□□ -1.77
CCDC60-205ENST00000546345 IGLV8-61A0A075B6I0 122 aa3.96□□□□□ -1.78
CCDC60-205ENST00000546345 SPRR1AP35321 89 aa3.96□□□□□ -1.78
CCDC60-205ENST00000546345 PRR4Q16378 134 aa3.96□□□□□ -1.78
CCDC60-205ENST00000546345 C9orf116Q5BN46 136 aaPredicted RBP3.96□□□□□ -1.78
CCDC60-205ENST00000546345 Q5VV11 94 aa3.96□□□□□ -1.78
CCDC60-205ENST00000546345 Q6ZRX8 168 aa3.96□□□□□ -1.78
CCDC60-205ENST00000546345 NKAPP1Q8N9T2 125 aa3.96□□□□□ -1.78
CCDC60-205ENST00000546345 Q8NDZ9 215 aa3.96□□□□□ -1.78
CCDC60-205ENST00000546345 CAMK2N2Q96S95 79 aa3.96□□□□□ -1.78
CCDC60-205ENST00000546345 Q8N377 158 aa3.95□□□□□ -1.78
CCDC60-205ENST00000546345 TP53AIP1Q9HCN2 124 aa3.95□□□□□ -1.78
CCDC60-205ENST00000546345 IGLV7-46A0A075B6I9 117 aa3.94□□□□□ -1.78
CCDC60-205ENST00000546345 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
CCDC60-205ENST00000546345 C7orf65Q6ZTY9 151 aa3.94□□□□□ -1.78
CCDC60-205ENST00000546345 A0A1W2PNM2 257 aa3.93□□□□□ -1.78
CCDC60-205ENST00000546345 CHKB-CPT1BH3BT56 60 aa3.93□□□□□ -1.78
CCDC60-205ENST00000546345 DSCR10P59022 87 aa3.93□□□□□ -1.78
CCDC60-205ENST00000546345 PSORS1C2Q9UIG4 136 aa3.93□□□□□ -1.78
CCDC60-205ENST00000546345 A8MUN3 132 aa3.92□□□□□ -1.78
CCDC60-205ENST00000546345 KRTAP4-16G5E9R7 235 aaPredicted RBP3.92□□□□□ -1.78
CCDC60-205ENST00000546345 PSPHP1O15172 72 aa3.92□□□□□ -1.78
CCDC60-205ENST00000546345 CLPSL2Q6UWE3 100 aa3.92□□□□□ -1.78
CCDC60-205ENST00000546345 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
CCDC60-205ENST00000546345 IGLV10-54A0A075B6I4 117 aa3.91□□□□□ -1.78
CCDC60-205ENST00000546345 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
CCDC60-205ENST00000546345 LCA10Q71F78 164 aa3.91□□□□□ -1.78
CCDC60-205ENST00000546345 Q8N9L7 120 aa3.91□□□□□ -1.78
CCDC60-205ENST00000546345 A0A096LNI7 61 aa3.9□□□□□ -1.79
CCDC60-205ENST00000546345 IGKV2-24A0A0C4DH68 120 aa3.9□□□□□ -1.79
CCDC60-205ENST00000546345 A6NN06 94 aa3.9□□□□□ -1.79
CCDC60-205ENST00000546345 KRTAP1-4P0C5Y4 121 aa3.9□□□□□ -1.79
CCDC60-205ENST00000546345 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms