RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 HECTD4Q9Y4D8 3996 aa5.21□□□□□ -1.57
TDP1-204ENST00000545686 ZNF861PO60384 105 aa5.21□□□□□ -1.58
TDP1-204ENST00000545686 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
TDP1-204ENST00000545686 PSORS1C2Q9UIG4 136 aa5.21□□□□□ -1.58
TDP1-204ENST00000545686 VPS13DQ5THJ4 4388 aa5.21□□□□□ -1.58
TDP1-204ENST00000545686 A0A087WTM6 91 aa5.2□□□□□ -1.58
TDP1-204ENST00000545686 SPAG11AQ6PDA7 123 aa5.2□□□□□ -1.58
TDP1-204ENST00000545686 DNAH8Q96JB1 4490 aa5.19□□□□□ -1.58
TDP1-204ENST00000545686 J3QL48 77 aa5.19□□□□□ -1.58
TDP1-204ENST00000545686 KRTAP13-3Q3SY46 172 aa5.19□□□□□ -1.58
TDP1-204ENST00000545686 SPTSSBQ8NFR3 76 aa5.18□□□□□ -1.58
TDP1-204ENST00000545686 MGAM2Q2M2H8 2515 aa5.18□□□□□ -1.58
TDP1-204ENST00000545686 A0A087X002 238 aa5.18□□□□□ -1.58
TDP1-204ENST00000545686 RTL8CO15255 209 aa5.18□□□□□ -1.58
TDP1-204ENST00000545686 NOTCH2NLQ7Z3S9 236 aa5.18□□□□□ -1.58
TDP1-204ENST00000545686 ALMS1Q8TCU4 4167 aa5.18□□□□□ -1.58
TDP1-204ENST00000545686 DNAH17Q9UFH2 4485 aa5.18□□□□□ -1.58
TDP1-204ENST00000545686 A6NN06 94 aa5.17□□□□□ -1.58
TDP1-204ENST00000545686 C8orf87E5RJ46 101 aa5.17□□□□□ -1.58
TDP1-204ENST00000545686 FRAS1Q86XX4 4008 aa5.15□□□□□ -1.58
TDP1-204ENST00000545686 PRKDCP78527 4128 aaKnown RBP5.14□□□□□ -1.59
TDP1-204ENST00000545686 ANAPC11Q9NYG5 84 aa5.14□□□□□ -1.59
TDP1-204ENST00000545686 ACYP2P14621 99 aa5.14□□□□□ -1.59
TDP1-204ENST00000545686 Q5W150 140 aa5.14□□□□□ -1.59
TDP1-204ENST00000545686 IGLV7-43P04211 117 aa5.13□□□□□ -1.59
TDP1-204ENST00000545686 STARD9Q9P2P6 4700 aa5.13□□□□□ -1.59
TDP1-204ENST00000545686 SPINK7P58062 85 aa5.12□□□□□ -1.59
TDP1-204ENST00000545686 SPINK6Q6UWN8 80 aa5.12□□□□□ -1.59
TDP1-204ENST00000545686 SSBP3-AS1Q7Z2R9 100 aa5.12□□□□□ -1.59
TDP1-204ENST00000545686 DMAC1Q96GE9 116 aa5.12□□□□□ -1.59
TDP1-204ENST00000545686 C7orf65Q6ZTY9 151 aa5.11□□□□□ -1.59
TDP1-204ENST00000545686 FAM229AH3BQW9 127 aa5.1□□□□□ -1.59
TDP1-204ENST00000545686 CIRBP-AS1Q8TBR5 109 aa5.1□□□□□ -1.59
TDP1-204ENST00000545686 PRR26Q8N8Z3 221 aa5.09□□□□□ -1.59
TDP1-204ENST00000545686 DNAH2Q9P225 4427 aa5.08□□□□□ -1.6
TDP1-204ENST00000545686 LINC00313P59037 77 aa5.07□□□□□ -1.6
TDP1-204ENST00000545686 RBM12B-AS1Q9P1G2 102 aa5.07□□□□□ -1.6
TDP1-204ENST00000545686 FBN3Q75N90 2809 aa5.06□□□□□ -1.6
TDP1-204ENST00000545686 IGKV2-30P06310 120 aa5.06□□□□□ -1.6
TDP1-204ENST00000545686 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
TDP1-204ENST00000545686 KRTAP3-2Q9BYR7 98 aa5.05□□□□□ -1.6
TDP1-204ENST00000545686 DNAH6Q9C0G6 4158 aa5.05□□□□□ -1.6
TDP1-204ENST00000545686 KMT2AQ03164 3969 aa5.05□□□□□ -1.6
TDP1-204ENST00000545686 C1orf134Q5TEV5 83 aa5.04□□□□□ -1.6
TDP1-204ENST00000545686 DNAH11Q96DT5 4516 aa5.02□□□□□ -1.61
TDP1-204ENST00000545686 A0A1B0GU69 56 aa5.02□□□□□ -1.61
TDP1-204ENST00000545686 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
TDP1-204ENST00000545686 MEGF8Q7Z7M0 2845 aa5.02□□□□□ -1.61
TDP1-204ENST00000545686 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
TDP1-204ENST00000545686 KRTAP13-2Q52LG2 175 aa5□□□□□ -1.61
TDP1-204ENST00000545686 SPATA8Q6RVD6 105 aa5□□□□□ -1.61
TDP1-204ENST00000545686 DNAH5Q8TE73 4624 aa4.99□□□□□ -1.61
TDP1-204ENST00000545686 RETNLBQ9BQ08 111 aa4.97□□□□□ -1.61
TDP1-204ENST00000545686 TGP01266 2768 aa4.96□□□□□ -1.61
TDP1-204ENST00000545686 UQCR11O14957 56 aa4.96□□□□□ -1.62
TDP1-204ENST00000545686 Q6ZSA8 131 aa4.96□□□□□ -1.62
TDP1-204ENST00000545686 PLA2G1BP04054 148 aaKnown RBP4.95□□□□□ -1.62
TDP1-204ENST00000545686 IGKV2D-30A0A075B6S6 120 aa4.95□□□□□ -1.62
TDP1-204ENST00000545686 MIR22HGQ0VDD5 57 aa4.94□□□□□ -1.62
TDP1-204ENST00000545686 KRTAP1-4P0C5Y4 121 aa4.93□□□□□ -1.62
TDP1-204ENST00000545686 KRTAP10-2P60368 255 aa4.93□□□□□ -1.62
TDP1-204ENST00000545686 LY6G6CO95867 125 aa4.91□□□□□ -1.62
TDP1-204ENST00000545686 PKD1P98161 4303 aa4.9□□□□□ -1.62
TDP1-204ENST00000545686 SPINK1P00995 79 aa4.9□□□□□ -1.63
TDP1-204ENST00000545686 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
TDP1-204ENST00000545686 LRP1BQ9NZR2 4599 aa4.88□□□□□ -1.63
TDP1-204ENST00000545686 RPS29P62273 56 aaKnown RBP4.87□□□□□ -1.63
TDP1-204ENST00000545686 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
TDP1-204ENST00000545686 VPS13BQ7Z7G8 4022 aa4.87□□□□□ -1.63
TDP1-204ENST00000545686 TYMSOSQ8TAI1 123 aa4.86□□□□□ -1.63
TDP1-204ENST00000545686 ADM2Q7Z4H4 148 aa4.84□□□□□ -1.63
TDP1-204ENST00000545686 FAT2Q9NYQ8 4349 aa4.84□□□□□ -1.63
TDP1-204ENST00000545686 LINC01554Q52M75 96 aa4.82□□□□□ -1.64
TDP1-204ENST00000545686 LINC00304Q8N9R0 145 aa4.81□□□□□ -1.64
TDP1-204ENST00000545686 SACSQ9NZJ4 4579 aa4.81□□□□□ -1.64
TDP1-204ENST00000545686 Q8N1X5 172 aa4.81□□□□□ -1.64
TDP1-204ENST00000545686 KRTAP21-3Q3LHN1 58 aa4.78□□□□□ -1.64
TDP1-204ENST00000545686 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
TDP1-204ENST00000545686 A8MUU9 505 aa4.77□□□□□ -1.65
TDP1-204ENST00000545686 CSAG1Q6PB30 78 aa4.75□□□□□ -1.65
TDP1-204ENST00000545686 H0YAA0 97 aa4.74□□□□□ -1.65
TDP1-204ENST00000545686 PKHD1L1Q86WI1 4243 aa4.74□□□□□ -1.65
TDP1-204ENST00000545686 HYDINQ4G0P3 5121 aa4.74□□□□□ -1.65
TDP1-204ENST00000545686 A0A1B0GU33 70 aa4.71□□□□□ -1.65
TDP1-204ENST00000545686 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.66
TDP1-204ENST00000545686 H1FX-AS1Q4G0G2 97 aa4.7□□□□□ -1.66
TDP1-204ENST00000545686 DNHD1Q96M86 4753 aa4.7□□□□□ -1.66
TDP1-204ENST00000545686 PKHD1P08F94 4074 aa4.68□□□□□ -1.66
TDP1-204ENST00000545686 C9orf92A6NGG3 77 aa4.68□□□□□ -1.66
TDP1-204ENST00000545686 APOBP04114 4563 aaKnown RBP4.68□□□□□ -1.66
TDP1-204ENST00000545686 H3BS24 57 aa4.68□□□□□ -1.66
TDP1-204ENST00000545686 COX6B2Q6YFQ2 88 aa4.65□□□□□ -1.66
TDP1-204ENST00000545686 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
TDP1-204ENST00000545686 DYNC1H1Q14204 4646 aaKnown RBP4.63□□□□□ -1.67
TDP1-204ENST00000545686 K7ERS5 55 aa4.63□□□□□ -1.67
TDP1-204ENST00000545686 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
TDP1-204ENST00000545686 SMR3BP02814 79 aaPredicted RBP4.6□□□□□ -1.67
TDP1-204ENST00000545686 A0A1B0GVY2 172 aa4.57□□□□□ -1.68
TDP1-204ENST00000545686 FLG2Q5D862 2391 aaPredicted RBP4.56□□□□□ -1.68
TDP1-204ENST00000545686 FAT1Q14517 4588 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms