RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
LTBR-214ENST00000545445 SIGMAR1Q99720 223 aa6.54□□□□□ -1.36
LTBR-214ENST00000545445 UBL5Q9BZL1 73 aa6.54□□□□□ -1.36
LTBR-214ENST00000545445 CDIP1Q9H305 208 aa6.54□□□□□ -1.36
LTBR-214ENST00000545445 ACYP1P07311 99 aa6.53□□□□□ -1.36
LTBR-214ENST00000545445 FAM240AA0A1B0GVK7 77 aa6.52□□□□□ -1.37
LTBR-214ENST00000545445 DEFB116Q30KQ4 102 aa6.52□□□□□ -1.37
LTBR-214ENST00000545445 LINC00846Q9NV44 126 aa6.52□□□□□ -1.37
LTBR-214ENST00000545445 NDUFB1O75438 58 aa6.51□□□□□ -1.37
LTBR-214ENST00000545445 Q6ZVQ6 151 aa6.51□□□□□ -1.37
LTBR-214ENST00000545445 J3QR89 54 aa6.49□□□□□ -1.37
LTBR-214ENST00000545445 BPY2O14599 106 aa6.49□□□□□ -1.37
LTBR-214ENST00000545445 C9orf92A6NGG3 77 aa6.48□□□□□ -1.37
LTBR-214ENST00000545445 A8MWP4 228 aa6.48□□□□□ -1.37
LTBR-214ENST00000545445 A0A1B0GVX0 72 aa6.47□□□□□ -1.37
LTBR-214ENST00000545445 C8orf87E5RJ46 101 aa6.47□□□□□ -1.37
LTBR-214ENST00000545445 IGHV6-1A0A0B4J1U7 121 aa6.45□□□□□ -1.38
LTBR-214ENST00000545445 LINC00313P59037 77 aa6.45□□□□□ -1.38
LTBR-214ENST00000545445 XP32Q5T750 250 aa6.45□□□□□ -1.38
LTBR-214ENST00000545445 DSCR10P59022 87 aa6.44□□□□□ -1.38
LTBR-214ENST00000545445 PRR15Q8IV56 129 aa6.44□□□□□ -1.38
LTBR-214ENST00000545445 IGKV3D-7A0A0C4DH55 119 aa6.43□□□□□ -1.38
LTBR-214ENST00000545445 CXCL6P80162 114 aa6.42□□□□□ -1.38
LTBR-214ENST00000545445 KRTAP4-1Q9BYQ7 146 aa6.41□□□□□ -1.38
LTBR-214ENST00000545445 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.38
LTBR-214ENST00000545445 ATP5EP2Q5VTU8 51 aa6.4□□□□□ -1.38
LTBR-214ENST00000545445 Q75L30 129 aa6.4□□□□□ -1.38
LTBR-214ENST00000545445 C8orf17Q9NRJ1 99 aa6.4□□□□□ -1.38
LTBR-214ENST00000545445 K7EQZ3 153 aa6.39□□□□□ -1.39
LTBR-214ENST00000545445 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
LTBR-214ENST00000545445 C20orf166-AS1Q96NR2 134 aa6.39□□□□□ -1.39
LTBR-214ENST00000545445 K7ERU9 68 aa6.38□□□□□ -1.39
LTBR-214ENST00000545445 NOTCH2NLQ7Z3S9 236 aa6.38□□□□□ -1.39
LTBR-214ENST00000545445 LINC00643Q86TS7 51 aa6.38□□□□□ -1.39
LTBR-214ENST00000545445 A8MUU9 505 aa6.37□□□□□ -1.39
LTBR-214ENST00000545445 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
LTBR-214ENST00000545445 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
LTBR-214ENST00000545445 hDV103S1A0JD37 113 aa6.34□□□□□ -1.39
LTBR-214ENST00000545445 ATP11AUNQ6ZP68 121 aa6.34□□□□□ -1.39
LTBR-214ENST00000545445 Q8N9L7 120 aa6.34□□□□□ -1.39
LTBR-214ENST00000545445 TMEM254Q8TBM7 123 aa6.34□□□□□ -1.39
LTBR-214ENST00000545445 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
LTBR-214ENST00000545445 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
LTBR-214ENST00000545445 MRPL34Q9BQ48 92 aaKnown RBP6.32□□□□□ -1.4
LTBR-214ENST00000545445 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
LTBR-214ENST00000545445 HCG22E2RYF7 251 aa6.3□□□□□ -1.4
LTBR-214ENST00000545445 PCOTHQ58A44 107 aa6.3□□□□□ -1.4
LTBR-214ENST00000545445 WFDC13Q8IUB5 93 aa6.28□□□□□ -1.4
LTBR-214ENST00000545445 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
LTBR-214ENST00000545445 HIST1H4AP62805 103 aaKnown RBP6.27□□□□□ -1.41
LTBR-214ENST00000545445 MT1HP80294 61 aa6.27□□□□□ -1.41
LTBR-214ENST00000545445 NDUFS5O43920 106 aa6.25□□□□□ -1.41
LTBR-214ENST00000545445 KRTAP19-2Q3LHN2 52 aa6.25□□□□□ -1.41
LTBR-214ENST00000545445 ZCCHC13Q8WW36 166 aaKnown RBP6.24□□□□□ -1.41
LTBR-214ENST00000545445 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
LTBR-214ENST00000545445 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
LTBR-214ENST00000545445 IMUPQ9GZP8 106 aa6.22□□□□□ -1.41
LTBR-214ENST00000545445 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.42
LTBR-214ENST00000545445 TP53AIP1Q9HCN2 124 aa6.21□□□□□ -1.42
LTBR-214ENST00000545445 USH2AO75445 5202 aa6.19□□□□□ -1.42
LTBR-214ENST00000545445 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
LTBR-214ENST00000545445 A0A087WVE0 104 aa6.18□□□□□ -1.42
LTBR-214ENST00000545445 MT-ATP8P03928 68 aa6.16□□□□□ -1.42
LTBR-214ENST00000545445 M0R2T5 61 aa6.12□□□□□ -1.43
LTBR-214ENST00000545445 Q5W150 140 aa6.12□□□□□ -1.43
LTBR-214ENST00000545445 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
LTBR-214ENST00000545445 UQCRQO14949 82 aa6.11□□□□□ -1.43
LTBR-214ENST00000545445 SPINK7P58062 85 aa6.11□□□□□ -1.43
LTBR-214ENST00000545445 SCGB1A1P11684 91 aa6.1□□□□□ -1.43
LTBR-214ENST00000545445 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
LTBR-214ENST00000545445 C7orf65Q6ZTY9 151 aa6.08□□□□□ -1.44
LTBR-214ENST00000545445 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
LTBR-214ENST00000545445 ATOX1O00244 68 aa6.06□□□□□ -1.44
LTBR-214ENST00000545445 OCR1Q9BZK8 76 aa6.06□□□□□ -1.44
LTBR-214ENST00000545445 IGKV2D-30A0A075B6S6 120 aa6.05□□□□□ -1.44
LTBR-214ENST00000545445 IGKV2-30P06310 120 aa6.05□□□□□ -1.44
LTBR-214ENST00000545445 HRES1P13985 223 aa6.05□□□□□ -1.44
LTBR-214ENST00000545445 SMIM20Q8N5G0 67 aa6.05□□□□□ -1.44
LTBR-214ENST00000545445 RBM12B-AS1Q9P1G2 102 aa6.05□□□□□ -1.44
LTBR-214ENST00000545445 FAM236AA0A1B0GUQ0 79 aa6.04□□□□□ -1.44
LTBR-214ENST00000545445 FAM236BA0A1B0GV22 79 aa6.04□□□□□ -1.44
LTBR-214ENST00000545445 C5orf47Q569G3 176 aa6.03□□□□□ -1.44
LTBR-214ENST00000545445 MPLKIPQ8TAP9 179 aa6.03□□□□□ -1.44
LTBR-214ENST00000545445 LOC101927531A0A1B0GV80 90 aa6.02□□□□□ -1.45
LTBR-214ENST00000545445 H0Y9P7 68 aa6.02□□□□□ -1.45
LTBR-214ENST00000545445 MP68P56378 58 aa6.02□□□□□ -1.45
LTBR-214ENST00000545445 COX6B2Q6YFQ2 88 aa6.02□□□□□ -1.45
LTBR-214ENST00000545445 H3BPC8 53 aa5.99□□□□□ -1.45
LTBR-214ENST00000545445 TRAV7A0A075B6U4 112 aa5.98□□□□□ -1.45
LTBR-214ENST00000545445 FAM236DA0A1B0GTK5 79 aa5.98□□□□□ -1.45
LTBR-214ENST00000545445 FAM236CP0DP71 79 aa5.98□□□□□ -1.45
LTBR-214ENST00000545445 CYP4F30PQ9H0H9 118 aa5.98□□□□□ -1.45
LTBR-214ENST00000545445 SYNE2Q8WXH0 6885 aaKnown RBP5.98□□□□□ -1.45
LTBR-214ENST00000545445 C1orf64Q8NEQ6 169 aa5.97□□□□□ -1.45
LTBR-214ENST00000545445 LINC00208Q96KT6 92 aa5.96□□□□□ -1.46
LTBR-214ENST00000545445 MACF1Q9UPN3 7388 aaKnown RBP5.95□□□□□ -1.46
LTBR-214ENST00000545445 C4orf26Q17RF5 130 aa5.91□□□□□ -1.46
LTBR-214ENST00000545445 SERP2Q8N6R1 65 aa5.91□□□□□ -1.46
LTBR-214ENST00000545445 H1FX-AS1Q4G0G2 97 aa5.87□□□□□ -1.47
LTBR-214ENST00000545445 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms