RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 DEFB116Q30KQ4 102 aa6.83□□□□□ -1.32
ACTN1-206ENST00000544964 ETDBQ3ZM63 59 aa6.83□□□□□ -1.32
ACTN1-206ENST00000544964 XP32Q5T750 250 aa6.83□□□□□ -1.32
ACTN1-206ENST00000544964 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
ACTN1-206ENST00000544964 LINC00472Q9H8W2 130 aa6.81□□□□□ -1.32
ACTN1-206ENST00000544964 A0A1B0GW54 56 aa6.8□□□□□ -1.32
ACTN1-206ENST00000544964 IGKV4-1P06312 121 aa6.8□□□□□ -1.32
ACTN1-206ENST00000544964 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
ACTN1-206ENST00000544964 SIGMAR1Q99720 223 aa6.8□□□□□ -1.32
ACTN1-206ENST00000544964 KRTAP19-2Q3LHN2 52 aa6.79□□□□□ -1.32
ACTN1-206ENST00000544964 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
ACTN1-206ENST00000544964 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
ACTN1-206ENST00000544964 K7ERU9 68 aa6.78□□□□□ -1.32
ACTN1-206ENST00000544964 NREPQ16612 68 aa6.75□□□□□ -1.33
ACTN1-206ENST00000544964 J3KT08 172 aa6.72□□□□□ -1.33
ACTN1-206ENST00000544964 DSCR10P59022 87 aa6.72□□□□□ -1.33
ACTN1-206ENST00000544964 MT1HP80294 61 aa6.71□□□□□ -1.34
ACTN1-206ENST00000544964 Q6ZVQ6 151 aa6.71□□□□□ -1.34
ACTN1-206ENST00000544964 LINC00846Q9NV44 126 aa6.71□□□□□ -1.34
ACTN1-206ENST00000544964 IGHV6-1A0A0B4J1U7 121 aa6.7□□□□□ -1.34
ACTN1-206ENST00000544964 PCOTHQ58A44 107 aa6.7□□□□□ -1.34
ACTN1-206ENST00000544964 A0A1B0GVX0 72 aa6.69□□□□□ -1.34
ACTN1-206ENST00000544964 NOTCH2NLQ7Z3S9 236 aa6.69□□□□□ -1.34
ACTN1-206ENST00000544964 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
ACTN1-206ENST00000544964 A8MWP4 228 aa6.67□□□□□ -1.34
ACTN1-206ENST00000544964 LINC00313P59037 77 aa6.67□□□□□ -1.34
ACTN1-206ENST00000544964 UBL5Q9BZL1 73 aa6.67□□□□□ -1.34
ACTN1-206ENST00000544964 IGKV3D-7A0A0C4DH55 119 aa6.66□□□□□ -1.34
ACTN1-206ENST00000544964 BPY2O14599 106 aa6.66□□□□□ -1.34
ACTN1-206ENST00000544964 NDUFB1O75438 58 aa6.66□□□□□ -1.34
ACTN1-206ENST00000544964 SMIM20Q8N5G0 67 aa6.65□□□□□ -1.34
ACTN1-206ENST00000544964 RPL37P61927 97 aaKnown RBP6.64□□□□□ -1.35
ACTN1-206ENST00000544964 V9GYY9 64 aa6.64□□□□□ -1.35
ACTN1-206ENST00000544964 KRTAP16-1A8MUX0 517 aa6.63□□□□□ -1.35
ACTN1-206ENST00000544964 C8orf87E5RJ46 101 aa6.63□□□□□ -1.35
ACTN1-206ENST00000544964 K7EQZ3 153 aa6.63□□□□□ -1.35
ACTN1-206ENST00000544964 PRR15Q8IV56 129 aa6.63□□□□□ -1.35
ACTN1-206ENST00000544964 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
ACTN1-206ENST00000544964 C8orf17Q9NRJ1 99 aa6.62□□□□□ -1.35
ACTN1-206ENST00000544964 ACYP1P07311 99 aa6.61□□□□□ -1.35
ACTN1-206ENST00000544964 Q8N9L7 120 aa6.61□□□□□ -1.35
ACTN1-206ENST00000544964 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
ACTN1-206ENST00000544964 FAM240AA0A1B0GVK7 77 aa6.6□□□□□ -1.35
ACTN1-206ENST00000544964 KRTAP10-6P60371 365 aaPredicted RBP6.6□□□□□ -1.35
ACTN1-206ENST00000544964 Q75L30 129 aa6.6□□□□□ -1.35
ACTN1-206ENST00000544964 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
ACTN1-206ENST00000544964 A8MUU9 505 aa6.59□□□□□ -1.35
ACTN1-206ENST00000544964 MMP24-AS1A0A0U1RRL7 71 aa6.57□□□□□ -1.36
ACTN1-206ENST00000544964 ATP11AUNQ6ZP68 121 aa6.55□□□□□ -1.36
ACTN1-206ENST00000544964 J3QR89 54 aa6.54□□□□□ -1.36
ACTN1-206ENST00000544964 CXCL6P80162 114 aa6.54□□□□□ -1.36
ACTN1-206ENST00000544964 WFDC13Q8IUB5 93 aa6.53□□□□□ -1.36
ACTN1-206ENST00000544964 hDV103S1A0JD37 113 aa6.52□□□□□ -1.37
ACTN1-206ENST00000544964 TMEM254Q8TBM7 123 aa6.52□□□□□ -1.37
ACTN1-206ENST00000544964 MRPL34Q9BQ48 92 aaKnown RBP6.52□□□□□ -1.37
ACTN1-206ENST00000544964 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
ACTN1-206ENST00000544964 CASC2Q6XLA1 102 aa6.5□□□□□ -1.37
ACTN1-206ENST00000544964 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
ACTN1-206ENST00000544964 HCG22E2RYF7 251 aa6.48□□□□□ -1.37
ACTN1-206ENST00000544964 M0R2T5 61 aa6.48□□□□□ -1.37
ACTN1-206ENST00000544964 ATP5EP2Q5VTU8 51 aa6.48□□□□□ -1.37
ACTN1-206ENST00000544964 COX6B2Q6YFQ2 88 aa6.48□□□□□ -1.37
ACTN1-206ENST00000544964 NDUFS5O43920 106 aa6.47□□□□□ -1.37
ACTN1-206ENST00000544964 PRO0628Q9UI54 55 aa6.47□□□□□ -1.37
ACTN1-206ENST00000544964 ZCCHC13Q8WW36 166 aaKnown RBP6.46□□□□□ -1.38
ACTN1-206ENST00000544964 HIST1H4AP62805 103 aaKnown RBP6.45□□□□□ -1.38
ACTN1-206ENST00000544964 RPS28P62857 69 aaKnown RBP6.42□□□□□ -1.38
ACTN1-206ENST00000544964 A0A087WVE0 104 aa6.4□□□□□ -1.38
ACTN1-206ENST00000544964 Q5W150 140 aa6.38□□□□□ -1.39
ACTN1-206ENST00000544964 ANAPC13Q9BS18 74 aa6.38□□□□□ -1.39
ACTN1-206ENST00000544964 C4orf26Q17RF5 130 aa6.35□□□□□ -1.39
ACTN1-206ENST00000544964 SSPOA2VEC9 5147 aa6.34□□□□□ -1.39
ACTN1-206ENST00000544964 MT-ATP8P03928 68 aa6.34□□□□□ -1.39
ACTN1-206ENST00000544964 SPINK7P58062 85 aa6.34□□□□□ -1.39
ACTN1-206ENST00000544964 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
ACTN1-206ENST00000544964 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
ACTN1-206ENST00000544964 USH2AO75445 5202 aa6.31□□□□□ -1.4
ACTN1-206ENST00000544964 HRES1P13985 223 aa6.31□□□□□ -1.4
ACTN1-206ENST00000544964 IGKV2D-30A0A075B6S6 120 aa6.3□□□□□ -1.4
ACTN1-206ENST00000544964 IGKV2-30P06310 120 aa6.3□□□□□ -1.4
ACTN1-206ENST00000544964 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
ACTN1-206ENST00000544964 C7orf65Q6ZTY9 151 aa6.26□□□□□ -1.41
ACTN1-206ENST00000544964 MPLKIPQ8TAP9 179 aa6.26□□□□□ -1.41
ACTN1-206ENST00000544964 IMUPQ9GZP8 106 aa6.26□□□□□ -1.41
ACTN1-206ENST00000544964 UQCRQO14949 82 aa6.24□□□□□ -1.41
ACTN1-206ENST00000544964 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
ACTN1-206ENST00000544964 TRAV22A0A0B4J277 110 aa6.23□□□□□ -1.41
ACTN1-206ENST00000544964 FAM236DA0A1B0GTK5 79 aa6.23□□□□□ -1.41
ACTN1-206ENST00000544964 FAM236CP0DP71 79 aa6.23□□□□□ -1.41
ACTN1-206ENST00000544964 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
ACTN1-206ENST00000544964 H3BS24 57 aa6.22□□□□□ -1.41
ACTN1-206ENST00000544964 OCR1Q9BZK8 76 aa6.22□□□□□ -1.41
ACTN1-206ENST00000544964 MT2AP02795 61 aa6.21□□□□□ -1.42
ACTN1-206ENST00000544964 H0Y9P7 68 aa6.2□□□□□ -1.42
ACTN1-206ENST00000544964 FAM236AA0A1B0GUQ0 79 aa6.19□□□□□ -1.42
ACTN1-206ENST00000544964 FAM236BA0A1B0GV22 79 aa6.19□□□□□ -1.42
ACTN1-206ENST00000544964 FCGBPQ9Y6R7 5405 aaPredicted RBP6.17□□□□□ -1.42
ACTN1-206ENST00000544964 CCDC179H3BU77 68 aa6.17□□□□□ -1.42
ACTN1-206ENST00000544964 MT1FP04733 61 aa6.17□□□□□ -1.42
ACTN1-206ENST00000544964 LOC101927531A0A1B0GV80 90 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms