RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 KRTDAPP60985 99 aa4.4□□□□□ -1.71
C2CD3-220ENST00000544293 MTURNQ8N3F0 131 aa4.39□□□□□ -1.71
C2CD3-220ENST00000544293 H3BMG7 143 aa4.38□□□□□ -1.71
C2CD3-220ENST00000544293 MT1BP07438 61 aa4.38□□□□□ -1.71
C2CD3-220ENST00000544293 COA6Q5JTJ3 125 aaKnown RBP4.38□□□□□ -1.71
C2CD3-220ENST00000544293 BVES-AS1Q5T3Y7 98 aa4.38□□□□□ -1.71
C2CD3-220ENST00000544293 C12orf57Q99622 126 aa4.38□□□□□ -1.71
C2CD3-220ENST00000544293 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
C2CD3-220ENST00000544293 ZCCHC13Q8WW36 166 aaKnown RBP4.37□□□□□ -1.71
C2CD3-220ENST00000544293 IGHV6-1A0A0B4J1U7 121 aa4.36□□□□□ -1.71
C2CD3-220ENST00000544293 A6NN06 94 aa4.35□□□□□ -1.71
C2CD3-220ENST00000544293 WFDC13Q8IUB5 93 aa4.34□□□□□ -1.71
C2CD3-220ENST00000544293 TRBV7-4A0A0J9YYF1 115 aa4.33□□□□□ -1.72
C2CD3-220ENST00000544293 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
C2CD3-220ENST00000544293 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
C2CD3-220ENST00000544293 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
C2CD3-220ENST00000544293 H0YGX0 51 aa4.3□□□□□ -1.72
C2CD3-220ENST00000544293 FABP2P12104 132 aa4.3□□□□□ -1.72
C2CD3-220ENST00000544293 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
C2CD3-220ENST00000544293 SNRPEP62304 92 aaKnown RBP4.3□□□□□ -1.72
C2CD3-220ENST00000544293 RAB37Q96AX2 223 aa4.3□□□□□ -1.72
C2CD3-220ENST00000544293 C8orf87E5RJ46 101 aa4.29□□□□□ -1.72
C2CD3-220ENST00000544293 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
C2CD3-220ENST00000544293 ANKRD29Q8N6D5 301 aa4.29□□□□□ -1.72
C2CD3-220ENST00000544293 H1FX-AS1Q4G0G2 97 aa4.28□□□□□ -1.72
C2CD3-220ENST00000544293 A0A1B0GV72 72 aa4.26□□□□□ -1.73
C2CD3-220ENST00000544293 A0A1B0GX51 115 aa4.26□□□□□ -1.73
C2CD3-220ENST00000544293 HIST1H4GQ99525 98 aa4.26□□□□□ -1.73
C2CD3-220ENST00000544293 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
C2CD3-220ENST00000544293 A0A0B4J2C4 111 aa4.24□□□□□ -1.73
C2CD3-220ENST00000544293 CCKP06307 115 aa4.24□□□□□ -1.73
C2CD3-220ENST00000544293 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
C2CD3-220ENST00000544293 SNCGO76070 127 aa4.23□□□□□ -1.73
C2CD3-220ENST00000544293 TRACP01848 142 aa4.22□□□□□ -1.73
C2CD3-220ENST00000544293 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
C2CD3-220ENST00000544293 Q5VV11 94 aa4.22□□□□□ -1.73
C2CD3-220ENST00000544293 COX8AP10176 69 aa4.21□□□□□ -1.74
C2CD3-220ENST00000544293 HIST1H2BLQ99880 126 aa4.21□□□□□ -1.74
C2CD3-220ENST00000544293 HIST3H2BBQ8N257 126 aa4.2□□□□□ -1.74
C2CD3-220ENST00000544293 IGKV3D-7A0A0C4DH55 119 aa4.19□□□□□ -1.74
C2CD3-220ENST00000544293 HSBP1L1C9JCN9 74 aa4.19□□□□□ -1.74
C2CD3-220ENST00000544293 DLEU1O43261 78 aa4.19□□□□□ -1.74
C2CD3-220ENST00000544293 C8orf17Q9NRJ1 99 aa4.19□□□□□ -1.74
C2CD3-220ENST00000544293 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
C2CD3-220ENST00000544293 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
C2CD3-220ENST00000544293 ORMDL1Q9P0S3 153 aa4.18□□□□□ -1.74
C2CD3-220ENST00000544293 C2orf91Q6ZV80 131 aa4.17□□□□□ -1.74
C2CD3-220ENST00000544293 PRO1854Q9UHT4 67 aa4.17□□□□□ -1.74
C2CD3-220ENST00000544293 J3KT08 172 aa4.16□□□□□ -1.74
C2CD3-220ENST00000544293 TMEM256-PLSCR3K7ERE1 68 aa4.16□□□□□ -1.74
C2CD3-220ENST00000544293 UBE2V1Q13404 147 aa4.16□□□□□ -1.74
C2CD3-220ENST00000544293 Q6ZQT0 140 aa4.16□□□□□ -1.74
C2CD3-220ENST00000544293 CEND1Q8N111 149 aa4.16□□□□□ -1.74
C2CD3-220ENST00000544293 C14orf144Q96I85 54 aa4.16□□□□□ -1.74
C2CD3-220ENST00000544293 HIGD1BQ9P298 99 aa4.16□□□□□ -1.74
C2CD3-220ENST00000544293 SPRR2EP22531 72 aa4.15□□□□□ -1.75
C2CD3-220ENST00000544293 SPRR2BP35325 72 aa4.15□□□□□ -1.75
C2CD3-220ENST00000544293 SPRR2AP35326 72 aa4.15□□□□□ -1.75
C2CD3-220ENST00000544293 VPS25Q9BRG1 176 aa4.15□□□□□ -1.75
C2CD3-220ENST00000544293 FXYD2P54710 66 aa4.14□□□□□ -1.75
C2CD3-220ENST00000544293 LYRM7Q5U5X0 104 aa4.14□□□□□ -1.75
C2CD3-220ENST00000544293 Q6ZVQ6 151 aa4.14□□□□□ -1.75
C2CD3-220ENST00000544293 SPRR2FQ96RM1 72 aa4.14□□□□□ -1.75
C2CD3-220ENST00000544293 H3BQ85 93 aa4.13□□□□□ -1.75
C2CD3-220ENST00000544293 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
C2CD3-220ENST00000544293 RBM3P98179 157 aaKnown RBP4.12□□□□□ -1.75
C2CD3-220ENST00000544293 C5orf47Q569G3 176 aa4.12□□□□□ -1.75
C2CD3-220ENST00000544293 Q5W150 140 aa4.12□□□□□ -1.75
C2CD3-220ENST00000544293 PAM16Q9Y3D7 125 aa4.12□□□□□ -1.75
C2CD3-220ENST00000544293 NDUFB1O75438 58 aa4.11□□□□□ -1.75
C2CD3-220ENST00000544293 DNAL4O96015 105 aa4.11□□□□□ -1.75
C2CD3-220ENST00000544293 MMP24-AS1A0A0U1RRL7 71 aa4.1□□□□□ -1.75
C2CD3-220ENST00000544293 FAM236AA0A1B0GUQ0 79 aa4.1□□□□□ -1.75
C2CD3-220ENST00000544293 FAM236BA0A1B0GV22 79 aa4.1□□□□□ -1.75
C2CD3-220ENST00000544293 PRR15Q8IV56 129 aa4.1□□□□□ -1.75
C2CD3-220ENST00000544293 DSCR8Q96T75 97 aa4.09□□□□□ -1.75
C2CD3-220ENST00000544293 MRPL34Q9BQ48 92 aaKnown RBP4.09□□□□□ -1.75
C2CD3-220ENST00000544293 K7ERJ3 54 aa4.08□□□□□ -1.76
C2CD3-220ENST00000544293 S100A2P29034 98 aa4.08□□□□□ -1.76
C2CD3-220ENST00000544293 C4orf26Q17RF5 130 aa4.08□□□□□ -1.76
C2CD3-220ENST00000544293 IGKV2D-30A0A075B6S6 120 aa4.07□□□□□ -1.76
C2CD3-220ENST00000544293 TMEM254Q8TBM7 123 aa4.07□□□□□ -1.76
C2CD3-220ENST00000544293 C9JAW5 83 aa4.06□□□□□ -1.76
C2CD3-220ENST00000544293 KLKP1Q107X0 134 aa4.06□□□□□ -1.76
C2CD3-220ENST00000544293 SPATA45Q537H7 98 aa4.05□□□□□ -1.76
C2CD3-220ENST00000544293 PSMB2P49721 201 aa4.04□□□□□ -1.76
C2CD3-220ENST00000544293 BAALC-AS2P0C853 105 aa4.03□□□□□ -1.76
C2CD3-220ENST00000544293 CSAG1Q6PB30 78 aa4.03□□□□□ -1.76
C2CD3-220ENST00000544293 C7orf65Q6ZTY9 151 aa4.03□□□□□ -1.76
C2CD3-220ENST00000544293 LCA10Q71F78 164 aa4.03□□□□□ -1.76
C2CD3-220ENST00000544293 hDV103S1A0JD37 113 aa4.02□□□□□ -1.77
C2CD3-220ENST00000544293 COX6CP09669 75 aa4.01□□□□□ -1.77
C2CD3-220ENST00000544293 SPRR2DP22532 72 aa4.01□□□□□ -1.77
C2CD3-220ENST00000544293 MT1XP80297 61 aa4.01□□□□□ -1.77
C2CD3-220ENST00000544293 LOC110117498A0A087WWA1 95 aa4□□□□□ -1.77
C2CD3-220ENST00000544293 K7EQZ3 153 aa4□□□□□ -1.77
C2CD3-220ENST00000544293 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
C2CD3-220ENST00000544293 S4R3F8 94 aa4□□□□□ -1.77
C2CD3-220ENST00000544293 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
C2CD3-220ENST00000544293 A0A1B0GW54 56 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms