RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	KRTAP6-3	Q3LI67	103 aa		3.93	□□□□□ -1.78
CIT-213	ENST00000543324	IGKV2-24	A0A0C4DH68	120 aa		3.92	□□□□□ -1.78
CIT-213	ENST00000543324	SYCN	Q0VAF6	134 aa		3.92	□□□□□ -1.78
CIT-213	ENST00000543324	C7orf33	Q8WU49	177 aa		3.92	□□□□□ -1.78
CIT-213	ENST00000543324	ZCCHC13	Q8WW36	166 aa	Known RBP	3.92	□□□□□ -1.78
CIT-213	ENST00000543324	CYP4F30P	Q9H0H9	118 aa		3.92	□□□□□ -1.78
CIT-213	ENST00000543324	SPAG11B	Q08648	103 aa		3.91	□□□□□ -1.78
CIT-213	ENST00000543324	GPR98	Q8WXG9	6306 aa		3.91	□□□□□ -1.78
CIT-213	ENST00000543324		A0A1W2PNN7	141 aa		3.9	□□□□□ -1.79
CIT-213	ENST00000543324	ZNF73	O43830	326 aa	Predicted RBP	3.9	□□□□□ -1.79
CIT-213	ENST00000543324	TLX1NB	P0CAT3	122 aa		3.9	□□□□□ -1.79
CIT-213	ENST00000543324	C9orf116	Q5BN46	136 aa	Predicted RBP	3.9	□□□□□ -1.79
CIT-213	ENST00000543324	SPINK6	Q6UWN8	80 aa		3.9	□□□□□ -1.79
CIT-213	ENST00000543324	KRTAP4-9	Q9BYQ8	210 aa		3.9	□□□□□ -1.79
CIT-213	ENST00000543324		Q6ZRP5	223 aa		3.89	□□□□□ -1.79
CIT-213	ENST00000543324	KRTAP7-1	Q8IUC3	87 aa		3.89	□□□□□ -1.79
CIT-213	ENST00000543324	MUC12	Q9UKN1	5478 aa		3.88	□□□□□ -1.79
CIT-213	ENST00000543324	IGLV5-48	A0A075B6I7	105 aa		3.88	□□□□□ -1.79
CIT-213	ENST00000543324		M0R378	163 aa		3.88	□□□□□ -1.79
CIT-213	ENST00000543324	VPREB1	P12018	145 aa		3.88	□□□□□ -1.79
CIT-213	ENST00000543324	PMAIP1	Q13794	54 aa		3.88	□□□□□ -1.79
CIT-213	ENST00000543324	C10orf25	Q5T742	122 aa		3.88	□□□□□ -1.79
CIT-213	ENST00000543324	UNQ6190/PRO20217	Q6UXQ8	127 aa		3.88	□□□□□ -1.79
CIT-213	ENST00000543324	MPLKIP	Q8TAP9	179 aa		3.88	□□□□□ -1.79
CIT-213	ENST00000543324	CAMK2N2	Q96S95	79 aa		3.88	□□□□□ -1.79
CIT-213	ENST00000543324	HIGD2A	Q9BW72	106 aa		3.88	□□□□□ -1.79
CIT-213	ENST00000543324	KRTAP11-1	Q8IUC1	163 aa		3.87	□□□□□ -1.79
CIT-213	ENST00000543324	C6orf48	Q9UBA6	75 aa		3.87	□□□□□ -1.79
CIT-213	ENST00000543324	PSORS1C2	Q9UIG4	136 aa		3.87	□□□□□ -1.79
CIT-213	ENST00000543324	NDUFB1	O75438	58 aa		3.86	□□□□□ -1.79
CIT-213	ENST00000543324	KRTAP4-2	Q9BYR5	136 aa		3.86	□□□□□ -1.79
CIT-213	ENST00000543324	ETDC	A0A1B0GVM5	59 aa		3.85	□□□□□ -1.79
CIT-213	ENST00000543324	CD164	Q04900	197 aa		3.85	□□□□□ -1.79
CIT-213	ENST00000543324	REG3G	Q6UW15	175 aa		3.85	□□□□□ -1.79
CIT-213	ENST00000543324	PHF5A	Q7RTV0	110 aa	Known RBP	3.85	□□□□□ -1.79
CIT-213	ENST00000543324	SMIM29	Q86T20	159 aa		3.85	□□□□□ -1.79
CIT-213	ENST00000543324	C1orf64	Q8NEQ6	169 aa		3.85	□□□□□ -1.79
CIT-213	ENST00000543324	SPRR4	Q96PI1	79 aa		3.85	□□□□□ -1.79
CIT-213	ENST00000543324	FAM168B	A1KXE4	195 aa		3.84	□□□□□ -1.79
CIT-213	ENST00000543324	KRTAP1-4	P0C5Y4	121 aa		3.84	□□□□□ -1.79
CIT-213	ENST00000543324	PRR4	Q16378	134 aa		3.84	□□□□□ -1.79
CIT-213	ENST00000543324		Q8N9L7	120 aa		3.84	□□□□□ -1.79
CIT-213	ENST00000543324		Q8NBF4	154 aa		3.84	□□□□□ -1.79
CIT-213	ENST00000543324	TRAV22	A0A0B4J277	110 aa		3.83	□□□□□ -1.8
CIT-213	ENST00000543324		H3BPC8	53 aa		3.83	□□□□□ -1.8
CIT-213	ENST00000543324	IGLV7-43	P04211	117 aa		3.83	□□□□□ -1.8
CIT-213	ENST00000543324		Q8N377	158 aa		3.83	□□□□□ -1.8
CIT-213	ENST00000543324	SPANXA2-OT1	Q8N9U9	137 aa		3.83	□□□□□ -1.8
CIT-213	ENST00000543324	KCNQ1DN	Q9H478	68 aa		3.83	□□□□□ -1.8
CIT-213	ENST00000543324	DHRS4-AS1	Q9P1J3	65 aa		3.83	□□□□□ -1.8
CIT-213	ENST00000543324		A0A1W2PNM2	257 aa		3.82	□□□□□ -1.8
CIT-213	ENST00000543324		H0Y9J4	135 aa		3.82	□□□□□ -1.8
CIT-213	ENST00000543324	KRTAP10-6	P60371	365 aa	Predicted RBP	3.82	□□□□□ -1.8
CIT-213	ENST00000543324	UBE2B	P63146	152 aa		3.82	□□□□□ -1.8
CIT-213	ENST00000543324	C1orf137	Q5JT78	98 aa		3.82	□□□□□ -1.8
CIT-213	ENST00000543324		Q9BRP9	147 aa		3.82	□□□□□ -1.8
CIT-213	ENST00000543324	IGLV5-37	A0A075B6J1	123 aa		3.81	□□□□□ -1.8
CIT-213	ENST00000543324	DSCR10	P59022	87 aa		3.81	□□□□□ -1.8
CIT-213	ENST00000543324	XAGE1A	Q9HD64	81 aa		3.81	□□□□□ -1.8
CIT-213	ENST00000543324	HCG22	E2RYF7	251 aa		3.8	□□□□□ -1.8
CIT-213	ENST00000543324	SPRR1A	P35321	89 aa		3.8	□□□□□ -1.8
CIT-213	ENST00000543324	UBE2A	P49459	152 aa		3.8	□□□□□ -1.8
CIT-213	ENST00000543324	LIMD2	Q9BT23	127 aa		3.8	□□□□□ -1.8
CIT-213	ENST00000543324	IGLV1-50	A0A075B6I6	118 aa		3.79	□□□□□ -1.8
CIT-213	ENST00000543324	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.79	□□□□□ -1.8
CIT-213	ENST00000543324		H3BS24	57 aa		3.79	□□□□□ -1.8
CIT-213	ENST00000543324	KRTAP19-4	Q3LI73	84 aa		3.79	□□□□□ -1.8
CIT-213	ENST00000543324		Q5VV11	94 aa		3.79	□□□□□ -1.8
CIT-213	ENST00000543324	PRR26	Q8N8Z3	221 aa		3.79	□□□□□ -1.8
CIT-213	ENST00000543324	MP68	P56378	58 aa		3.78	□□□□□ -1.8
CIT-213	ENST00000543324	MT1H	P80294	61 aa		3.78	□□□□□ -1.8
CIT-213	ENST00000543324		Q6ZRX8	168 aa		3.78	□□□□□ -1.8
CIT-213	ENST00000543324	MRPL55	Q7Z7F7	128 aa	Known RBP	3.78	□□□□□ -1.8
CIT-213	ENST00000543324	KTN1-AS1	Q86SY8	53 aa		3.78	□□□□□ -1.8
CIT-213	ENST00000543324	KRTAP13-1	Q8IUC0	172 aa		3.78	□□□□□ -1.8
CIT-213	ENST00000543324	LOC101927531	A0A1B0GV80	90 aa		3.77	□□□□□ -1.81
CIT-213	ENST00000543324		A8MUN3	132 aa		3.77	□□□□□ -1.81
CIT-213	ENST00000543324		K7EQZ3	153 aa		3.77	□□□□□ -1.81
CIT-213	ENST00000543324	NDUFS5	O43920	106 aa		3.77	□□□□□ -1.81
CIT-213	ENST00000543324	LCE4A	Q5TA78	99 aa		3.77	□□□□□ -1.81
CIT-213	ENST00000543324		Q75L30	129 aa		3.77	□□□□□ -1.81
CIT-213	ENST00000543324		Q8N9P0	234 aa	Predicted RBP	3.77	□□□□□ -1.81
CIT-213	ENST00000543324	ST20-AS1	Q8NBB2	130 aa		3.77	□□□□□ -1.81
CIT-213	ENST00000543324	IGLV8-61	A0A075B6I0	122 aa		3.76	□□□□□ -1.81
CIT-213	ENST00000543324	PSPHP1	O15172	72 aa		3.76	□□□□□ -1.81
CIT-213	ENST00000543324	ZNF861P	O60384	105 aa		3.76	□□□□□ -1.81
CIT-213	ENST00000543324	ATP11AUN	Q6ZP68	121 aa		3.76	□□□□□ -1.81
CIT-213	ENST00000543324	NKAPP1	Q8N9T2	125 aa		3.76	□□□□□ -1.81
CIT-213	ENST00000543324	LINC00208	Q96KT6	92 aa		3.76	□□□□□ -1.81
CIT-213	ENST00000543324	KMT2D	O14686	5537 aa		3.76	□□□□□ -1.81
CIT-213	ENST00000543324		A0A087X002	238 aa		3.74	□□□□□ -1.81
CIT-213	ENST00000543324	DEFB105A	Q8NG35	78 aa		3.74	□□□□□ -1.81
CIT-213	ENST00000543324	KRTAP4-11	Q9BYQ6	195 aa		3.74	□□□□□ -1.81
CIT-213	ENST00000543324	RPL37AP8	A6NKH3	93 aa		3.73	□□□□□ -1.81
CIT-213	ENST00000543324		A6NN06	94 aa		3.73	□□□□□ -1.81
CIT-213	ENST00000543324		H0Y9P7	68 aa		3.72	□□□□□ -1.81
CIT-213	ENST00000543324	KRTAP13-2	Q52LG2	175 aa		3.72	□□□□□ -1.81
CIT-213	ENST00000543324	CDC42SE1	Q9NRR8	79 aa		3.72	□□□□□ -1.81
CIT-213	ENST00000543324	IGLV7-46	A0A075B6I9	117 aa		3.71	□□□□□ -1.82
CIT-213	ENST00000543324	CHKB-CPT1B	H3BT56	60 aa		3.71	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms