RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
LIMS1-214ENST00000542845 C18orf32Q8TCD1 76 aa2.16□□□□□ -2.06
LIMS1-214ENST00000542845 SIGMAR1Q99720 223 aa2.16□□□□□ -2.06
LIMS1-214ENST00000542845 C8orf17Q9NRJ1 99 aa2.16□□□□□ -2.06
LIMS1-214ENST00000542845 TRBV7-6A0A0J9YX20 115 aa2.15□□□□□ -2.07
LIMS1-214ENST00000542845 FAM236AA0A1B0GUQ0 79 aa2.15□□□□□ -2.07
LIMS1-214ENST00000542845 FAM236BA0A1B0GV22 79 aa2.15□□□□□ -2.07
LIMS1-214ENST00000542845 SCGB1C2P0DMR2 95 aa2.15□□□□□ -2.07
LIMS1-214ENST00000542845 S100PP25815 95 aa2.15□□□□□ -2.07
LIMS1-214ENST00000542845 SPINK7P58062 85 aa2.15□□□□□ -2.07
LIMS1-214ENST00000542845 NHP2Q9NX24 153 aaKnown RBP2.15□□□□□ -2.07
LIMS1-214ENST00000542845 SS18L2Q9UHA2 77 aa2.15□□□□□ -2.07
LIMS1-214ENST00000542845 H3BUT2 72 aa2.14□□□□□ -2.07
LIMS1-214ENST00000542845 WFDC13Q8IUB5 93 aa2.14□□□□□ -2.07
LIMS1-214ENST00000542845 PMCHL2Q9BQD1 86 aa2.14□□□□□ -2.07
LIMS1-214ENST00000542845 ZNF815PA8K554 130 aa2.13□□□□□ -2.07
LIMS1-214ENST00000542845 S100A2P29034 98 aa2.13□□□□□ -2.07
LIMS1-214ENST00000542845 YPEL4Q96NS1 127 aa2.13□□□□□ -2.07
LIMS1-214ENST00000542845 SNHG12Q9BXW3 62 aa2.13□□□□□ -2.07
LIMS1-214ENST00000542845 TRAPPC1Q9Y5R8 145 aa2.13□□□□□ -2.07
LIMS1-214ENST00000542845 A0A087WSZ3 146 aa2.12□□□□□ -2.07
LIMS1-214ENST00000542845 IGKV4-1P06312 121 aa2.12□□□□□ -2.07
LIMS1-214ENST00000542845 COX19Q49B96 90 aa2.12□□□□□ -2.07
LIMS1-214ENST00000542845 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
LIMS1-214ENST00000542845 Q6ZQY7 126 aa2.12□□□□□ -2.07
LIMS1-214ENST00000542845 Q8N9L7 120 aa2.12□□□□□ -2.07
LIMS1-214ENST00000542845 A8MU10 97 aa2.11□□□□□ -2.07
LIMS1-214ENST00000542845 DPM2O94777 84 aa2.11□□□□□ -2.07
LIMS1-214ENST00000542845 PLNP26678 52 aa2.11□□□□□ -2.07
LIMS1-214ENST00000542845 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
LIMS1-214ENST00000542845 KRTAP4-3Q9BYR4 195 aa2.11□□□□□ -2.07
LIMS1-214ENST00000542845 HSPB8Q9UJY1 196 aa2.11□□□□□ -2.07
LIMS1-214ENST00000542845 hADV29S1A0JD25 119 aa2.1□□□□□ -2.07
LIMS1-214ENST00000542845 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
LIMS1-214ENST00000542845 IGKCP01834 107 aa2.1□□□□□ -2.07
LIMS1-214ENST00000542845 H1FX-AS1Q4G0G2 97 aa2.1□□□□□ -2.07
LIMS1-214ENST00000542845 LYRM7Q5U5X0 104 aa2.1□□□□□ -2.07
LIMS1-214ENST00000542845 TEN1Q86WV5 123 aa2.1□□□□□ -2.07
LIMS1-214ENST00000542845 SMIM11BQ8TCY0 68 aa2.1□□□□□ -2.07
LIMS1-214ENST00000542845 ZCCHC13Q8WW36 166 aaKnown RBP2.1□□□□□ -2.07
LIMS1-214ENST00000542845 S100A6P06703 90 aa2.09□□□□□ -2.07
LIMS1-214ENST00000542845 FABP4P15090 132 aa2.09□□□□□ -2.07
LIMS1-214ENST00000542845 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
LIMS1-214ENST00000542845 LINC00575Q6W349 94 aa2.09□□□□□ -2.07
LIMS1-214ENST00000542845 CHCHD1Q96BP2 118 aaKnown RBP2.09□□□□□ -2.07
LIMS1-214ENST00000542845 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
LIMS1-214ENST00000542845 TIMM17BO60830 172 aa2.08□□□□□ -2.08
LIMS1-214ENST00000542845 LEPROTL1O95214 131 aa2.08□□□□□ -2.08
LIMS1-214ENST00000542845 TTTY13Q9BZ97 58 aa2.08□□□□□ -2.08
LIMS1-214ENST00000542845 K7ERS5 55 aa2.07□□□□□ -2.08
LIMS1-214ENST00000542845 MP68P56378 58 aa2.07□□□□□ -2.08
LIMS1-214ENST00000542845 Q5W150 140 aa2.07□□□□□ -2.08
LIMS1-214ENST00000542845 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
LIMS1-214ENST00000542845 KRTAP10-12P60413 245 aa2.06□□□□□ -2.08
LIMS1-214ENST00000542845 MUSTN1Q8IVN3 82 aa2.06□□□□□ -2.08
LIMS1-214ENST00000542845 SPRR2GQ9BYE4 73 aa2.06□□□□□ -2.08
LIMS1-214ENST00000542845 C3orf79P0CE67 100 aa2.05□□□□□ -2.08
LIMS1-214ENST00000542845 LCE3CQ5T5A8 94 aa2.05□□□□□ -2.08
LIMS1-214ENST00000542845 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.05□□□□□ -2.08
LIMS1-214ENST00000542845 SCGB1D4Q6XE38 83 aa2.05□□□□□ -2.08
LIMS1-214ENST00000542845 H3BMG7 143 aa2.04□□□□□ -2.08
LIMS1-214ENST00000542845 C4orf26Q17RF5 130 aa2.04□□□□□ -2.08
LIMS1-214ENST00000542845 COPS9Q8WXC6 57 aa2.04□□□□□ -2.08
LIMS1-214ENST00000542845 C12orf57Q99622 126 aa2.04□□□□□ -2.08
LIMS1-214ENST00000542845 A0A1B0GV72 72 aa2.03□□□□□ -2.08
LIMS1-214ENST00000542845 TMEM218A2RU14 115 aa2.03□□□□□ -2.08
LIMS1-214ENST00000542845 A6NED7 52 aa2.03□□□□□ -2.08
LIMS1-214ENST00000542845 C8orf87E5RJ46 101 aa2.03□□□□□ -2.08
LIMS1-214ENST00000542845 IFITM1P13164 125 aa2.03□□□□□ -2.08
LIMS1-214ENST00000542845 PPDPFLQ8WWR9 84 aa2.03□□□□□ -2.08
LIMS1-214ENST00000542845 IGKV3D-7A0A0C4DH55 119 aa2.02□□□□□ -2.09
LIMS1-214ENST00000542845 TRGC2P03986 189 aa2.02□□□□□ -2.09
LIMS1-214ENST00000542845 FABP2P12104 132 aa2.02□□□□□ -2.09
LIMS1-214ENST00000542845 DSCR8Q96T75 97 aa2.02□□□□□ -2.09
LIMS1-214ENST00000542845 SPANXA2-OT1Q8N9U9 137 aa2.01□□□□□ -2.09
LIMS1-214ENST00000542845 LINC00472Q9H8W2 130 aa2.01□□□□□ -2.09
LIMS1-214ENST00000542845 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
LIMS1-214ENST00000542845 RBM3P98179 157 aaKnown RBP2□□□□□ -2.09
LIMS1-214ENST00000542845 KLKP1Q107X0 134 aa2□□□□□ -2.09
LIMS1-214ENST00000542845 RAB37Q96AX2 223 aa2□□□□□ -2.09
LIMS1-214ENST00000542845 PRO2289Q9P1D8 64 aa2□□□□□ -2.09
LIMS1-214ENST00000542845 A0A0B4J2C4 111 aa1.99□□□□□ -2.09
LIMS1-214ENST00000542845 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
LIMS1-214ENST00000542845 SNCGO76070 127 aa1.99□□□□□ -2.09
LIMS1-214ENST00000542845 BVES-AS1Q5T3Y7 98 aa1.99□□□□□ -2.09
LIMS1-214ENST00000542845 CSAG1Q6PB30 78 aa1.99□□□□□ -2.09
LIMS1-214ENST00000542845 SPINT4Q6UDR6 99 aa1.99□□□□□ -2.09
LIMS1-214ENST00000542845 LCA10Q71F78 164 aa1.99□□□□□ -2.09
LIMS1-214ENST00000542845 ANKRD29Q8N6D5 301 aa1.99□□□□□ -2.09
LIMS1-214ENST00000542845 VPS25Q9BRG1 176 aa1.98□□□□□ -2.09
LIMS1-214ENST00000542845 TRBV7-4A0A0J9YYF1 115 aa1.97□□□□□ -2.09
LIMS1-214ENST00000542845 SYS1-DBNDD2H3BUS1 97 aa1.97□□□□□ -2.09
LIMS1-214ENST00000542845 TRACP01848 142 aa1.97□□□□□ -2.09
LIMS1-214ENST00000542845 MT4P47944 62 aa1.97□□□□□ -2.09
LIMS1-214ENST00000542845 S4R3F8 94 aa1.97□□□□□ -2.09
LIMS1-214ENST00000542845 NDUFB1O75438 58 aa1.96□□□□□ -2.1
LIMS1-214ENST00000542845 CCKP06307 115 aa1.96□□□□□ -2.1
LIMS1-214ENST00000542845 MT1XP80297 61 aa1.96□□□□□ -2.1
LIMS1-214ENST00000542845 CLLU1Q5K131 121 aa1.96□□□□□ -2.1
LIMS1-214ENST00000542845 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms