RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 IGHV6-1A0A0B4J1U7 121 aa3.93□□□□□ -1.78
PTPRO-208ENST00000542557 TRAV22A0A0B4J277 110 aa3.93□□□□□ -1.78
PTPRO-208ENST00000542557 MOBPQ13875 183 aa3.93□□□□□ -1.78
PTPRO-208ENST00000542557 ASB16-AS1Q495Z4 193 aa3.93□□□□□ -1.78
PTPRO-208ENST00000542557 FBN3Q75N90 2809 aa3.92□□□□□ -1.78
PTPRO-208ENST00000542557 hDV103S1A0JD37 113 aa3.92□□□□□ -1.78
PTPRO-208ENST00000542557 H0Y9P7 68 aa3.92□□□□□ -1.78
PTPRO-208ENST00000542557 ALMS1Q8TCU4 4167 aa3.92□□□□□ -1.78
PTPRO-208ENST00000542557 A8MUN3 132 aa3.91□□□□□ -1.78
PTPRO-208ENST00000542557 IGLV7-43P04211 117 aa3.91□□□□□ -1.78
PTPRO-208ENST00000542557 FAM229BQ4G0N7 80 aa3.91□□□□□ -1.78
PTPRO-208ENST00000542557 LINC00208Q96KT6 92 aa3.91□□□□□ -1.78
PTPRO-208ENST00000542557 LORP23490 312 aaPredicted RBP3.91□□□□□ -1.78
PTPRO-208ENST00000542557 SPANXA2-OT1Q8N9U9 137 aa3.91□□□□□ -1.78
PTPRO-208ENST00000542557 FRAS1Q86XX4 4008 aa3.9□□□□□ -1.78
PTPRO-208ENST00000542557 LINC00313P59037 77 aa3.9□□□□□ -1.78
PTPRO-208ENST00000542557 TP53AIP1Q9HCN2 124 aa3.9□□□□□ -1.78
PTPRO-208ENST00000542557 C8orf17Q9NRJ1 99 aa3.9□□□□□ -1.78
PTPRO-208ENST00000542557 LY6G6CO95867 125 aa3.9□□□□□ -1.79
PTPRO-208ENST00000542557 C1orf64Q8NEQ6 169 aa3.9□□□□□ -1.79
PTPRO-208ENST00000542557 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
PTPRO-208ENST00000542557 A0A1B0GVX0 72 aa3.89□□□□□ -1.79
PTPRO-208ENST00000542557 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
PTPRO-208ENST00000542557 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
PTPRO-208ENST00000542557 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
PTPRO-208ENST00000542557 LCA10Q71F78 164 aa3.88□□□□□ -1.79
PTPRO-208ENST00000542557 ANAPC11Q9NYG5 84 aa3.88□□□□□ -1.79
PTPRO-208ENST00000542557 FAT2Q9NYQ8 4349 aa3.87□□□□□ -1.79
PTPRO-208ENST00000542557 TGP01266 2768 aa3.87□□□□□ -1.79
PTPRO-208ENST00000542557 SSBP3-AS1Q7Z2R9 100 aa3.87□□□□□ -1.79
PTPRO-208ENST00000542557 CIRBP-AS1Q8TBR5 109 aa3.87□□□□□ -1.79
PTPRO-208ENST00000542557 KRTAP10-2P60368 255 aa3.86□□□□□ -1.79
PTPRO-208ENST00000542557 Q6ZSA8 131 aa3.86□□□□□ -1.79
PTPRO-208ENST00000542557 LRP1BQ9NZR2 4599 aa3.86□□□□□ -1.79
PTPRO-208ENST00000542557 MRPL34Q9BQ48 92 aaKnown RBP3.86□□□□□ -1.79
PTPRO-208ENST00000542557 PKD1P98161 4303 aa3.85□□□□□ -1.79
PTPRO-208ENST00000542557 Q1T7F1 81 aa3.85□□□□□ -1.79
PTPRO-208ENST00000542557 PRR4Q16378 134 aa3.85□□□□□ -1.79
PTPRO-208ENST00000542557 MPLKIPQ8TAP9 179 aa3.85□□□□□ -1.79
PTPRO-208ENST00000542557 IGLV7-46A0A075B6I9 117 aa3.84□□□□□ -1.8
PTPRO-208ENST00000542557 KRTAP21-3Q3LHN1 58 aa3.83□□□□□ -1.8
PTPRO-208ENST00000542557 A0A087X002 238 aa3.82□□□□□ -1.8
PTPRO-208ENST00000542557 HYDINQ4G0P3 5121 aa3.82□□□□□ -1.8
PTPRO-208ENST00000542557 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
PTPRO-208ENST00000542557 SPINK6Q6UWN8 80 aa3.81□□□□□ -1.8
PTPRO-208ENST00000542557 KRTAP13-2Q52LG2 175 aa3.8□□□□□ -1.8
PTPRO-208ENST00000542557 LOC101927531A0A1B0GV80 90 aa3.8□□□□□ -1.8
PTPRO-208ENST00000542557 KRTAP13-3Q3SY46 172 aa3.8□□□□□ -1.8
PTPRO-208ENST00000542557 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
PTPRO-208ENST00000542557 PCOTHQ58A44 107 aa3.79□□□□□ -1.8
PTPRO-208ENST00000542557 KRTAP1-4P0C5Y4 121 aa3.78□□□□□ -1.8
PTPRO-208ENST00000542557 COA5Q86WW8 74 aa3.78□□□□□ -1.8
PTPRO-208ENST00000542557 LIMD2Q9BT23 127 aa3.77□□□□□ -1.81
PTPRO-208ENST00000542557 LINC01554Q52M75 96 aa3.77□□□□□ -1.81
PTPRO-208ENST00000542557 Q5W150 140 aa3.77□□□□□ -1.81
PTPRO-208ENST00000542557 Q8N9P0 234 aaPredicted RBP3.77□□□□□ -1.81
PTPRO-208ENST00000542557 VPS13BQ7Z7G8 4022 aa3.76□□□□□ -1.81
PTPRO-208ENST00000542557 C7orf65Q6ZTY9 151 aa3.75□□□□□ -1.81
PTPRO-208ENST00000542557 DYNC1H1Q14204 4646 aaKnown RBP3.74□□□□□ -1.81
PTPRO-208ENST00000542557 KRTAP16-1A8MUX0 517 aa3.74□□□□□ -1.81
PTPRO-208ENST00000542557 Q5VV11 94 aa3.74□□□□□ -1.81
PTPRO-208ENST00000542557 HRES1P13985 223 aa3.73□□□□□ -1.81
PTPRO-208ENST00000542557 SPINK1P00995 79 aa3.72□□□□□ -1.81
PTPRO-208ENST00000542557 RPS29P62273 56 aaKnown RBP3.72□□□□□ -1.81
PTPRO-208ENST00000542557 TYMSOSQ8TAI1 123 aa3.71□□□□□ -1.81
PTPRO-208ENST00000542557 PKHD1P08F94 4074 aa3.71□□□□□ -1.82
PTPRO-208ENST00000542557 IGKV2-30P06310 120 aa3.71□□□□□ -1.82
PTPRO-208ENST00000542557 LINC01558Q9Y6Z2 57 aa3.71□□□□□ -1.82
PTPRO-208ENST00000542557 PRR15LQ9BU68 103 aa3.71□□□□□ -1.82
PTPRO-208ENST00000542557 APOBP04114 4563 aaKnown RBP3.7□□□□□ -1.82
PTPRO-208ENST00000542557 DMAC1Q96GE9 116 aa3.7□□□□□ -1.82
PTPRO-208ENST00000542557 ACYP2P14621 99 aa3.69□□□□□ -1.82
PTPRO-208ENST00000542557 SPAG11AQ6PDA7 123 aa3.69□□□□□ -1.82
PTPRO-208ENST00000542557 CHKB-CPT1BH3BT56 60 aa3.68□□□□□ -1.82
PTPRO-208ENST00000542557 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
PTPRO-208ENST00000542557 PKHD1L1Q86WI1 4243 aa3.68□□□□□ -1.82
PTPRO-208ENST00000542557 A6NN06 94 aa3.67□□□□□ -1.82
PTPRO-208ENST00000542557 ATP11AUNQ6ZP68 121 aa3.67□□□□□ -1.82
PTPRO-208ENST00000542557 LINC00304Q8N9R0 145 aa3.67□□□□□ -1.82
PTPRO-208ENST00000542557 A0A1B0GVY2 172 aa3.67□□□□□ -1.82
PTPRO-208ENST00000542557 FAT1Q14517 4588 aa3.67□□□□□ -1.82
PTPRO-208ENST00000542557 RYR2Q92736 4967 aa3.65□□□□□ -1.82
PTPRO-208ENST00000542557 RETNLBQ9BQ08 111 aa3.65□□□□□ -1.82
PTPRO-208ENST00000542557 KRTAP10-4P60372 401 aaPredicted RBP3.64□□□□□ -1.83
PTPRO-208ENST00000542557 A6NED7 52 aa3.64□□□□□ -1.83
PTPRO-208ENST00000542557 IGKV2D-30A0A075B6S6 120 aa3.63□□□□□ -1.83
PTPRO-208ENST00000542557 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
PTPRO-208ENST00000542557 SMR3BP02814 79 aaPredicted RBP3.62□□□□□ -1.83
PTPRO-208ENST00000542557 A8MU10 97 aa3.61□□□□□ -1.83
PTPRO-208ENST00000542557 C20orf166-AS1Q96NR2 134 aa3.6□□□□□ -1.83
PTPRO-208ENST00000542557 A8MUU9 505 aa3.59□□□□□ -1.83
PTPRO-208ENST00000542557 SPINK7P58062 85 aa3.59□□□□□ -1.84
PTPRO-208ENST00000542557 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
PTPRO-208ENST00000542557 KMT2CQ8NEZ4 4911 aaKnown RBP3.57□□□□□ -1.84
PTPRO-208ENST00000542557 FAT3Q8TDW7 4589 aa3.57□□□□□ -1.84
PTPRO-208ENST00000542557 A0A1B0GU69 56 aa3.57□□□□□ -1.84
PTPRO-208ENST00000542557 SPTSSBQ8NFR3 76 aa3.55□□□□□ -1.84
PTPRO-208ENST00000542557 C9orf92A6NGG3 77 aa3.54□□□□□ -1.84
PTPRO-208ENST00000542557 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
PTPRO-208ENST00000542557 TNXBP22105 4242 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms