RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 LINC00483Q53H64 154 aa3.16□□□□□ -1.9
ATPAF1-212ENST00000542495 CASC2Q6XLA1 102 aa3.16□□□□□ -1.9
ATPAF1-212ENST00000542495 SPACA4Q8TDM5 124 aa3.16□□□□□ -1.9
ATPAF1-212ENST00000542495 VPS13DQ5THJ4 4388 aa3.16□□□□□ -1.9
ATPAF1-212ENST00000542495 PLECQ15149 4684 aaKnown RBP3.16□□□□□ -1.9
ATPAF1-212ENST00000542495 DNAH7Q8WXX0 4024 aa3.16□□□□□ -1.9
ATPAF1-212ENST00000542495 NUPR2A6NF83 97 aa3.15□□□□□ -1.9
ATPAF1-212ENST00000542495 Q1T7F1 81 aa3.15□□□□□ -1.9
ATPAF1-212ENST00000542495 ASB16-AS1Q495Z4 193 aa3.15□□□□□ -1.9
ATPAF1-212ENST00000542495 MMP24-AS1A0A0U1RRL7 71 aa3.15□□□□□ -1.91
ATPAF1-212ENST00000542495 SPANXA2-OT1Q8N9U9 137 aa3.15□□□□□ -1.91
ATPAF1-212ENST00000542495 Q96NJ1 140 aa3.15□□□□□ -1.91
ATPAF1-212ENST00000542495 STAB2Q8WWQ8 2551 aa3.14□□□□□ -1.91
ATPAF1-212ENST00000542495 H0Y9P7 68 aa3.14□□□□□ -1.91
ATPAF1-212ENST00000542495 LINC00208Q96KT6 92 aa3.14□□□□□ -1.91
ATPAF1-212ENST00000542495 CSMD3Q7Z407 3707 aa3.14□□□□□ -1.91
ATPAF1-212ENST00000542495 RYR2Q92736 4967 aa3.13□□□□□ -1.91
ATPAF1-212ENST00000542495 TENM2Q9NT68 2774 aa3.13□□□□□ -1.91
ATPAF1-212ENST00000542495 SACSQ9NZJ4 4579 aa3.12□□□□□ -1.91
ATPAF1-212ENST00000542495 A0A087WTM6 91 aa3.12□□□□□ -1.91
ATPAF1-212ENST00000542495 DNAH17Q9UFH2 4485 aa3.12□□□□□ -1.91
ATPAF1-212ENST00000542495 MOBPQ13875 183 aa3.12□□□□□ -1.91
ATPAF1-212ENST00000542495 PRR4Q16378 134 aa3.11□□□□□ -1.91
ATPAF1-212ENST00000542495 Q6ZR54 194 aa3.11□□□□□ -1.91
ATPAF1-212ENST00000542495 PLAC8Q9NZF1 115 aa3.11□□□□□ -1.91
ATPAF1-212ENST00000542495 ZNF706Q9Y5V0 76 aaPredicted RBP3.11□□□□□ -1.91
ATPAF1-212ENST00000542495 BIRC6Q9NR09 4857 aa3.11□□□□□ -1.91
ATPAF1-212ENST00000542495 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
ATPAF1-212ENST00000542495 DNAH8Q96JB1 4490 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 HECTD4Q9Y4D8 3996 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 IGLV9-49A0A0B4J1Y8 123 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 TP53AIP1Q9HCN2 124 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 C8orf17Q9NRJ1 99 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 PSORS1C2Q9UIG4 136 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 STARD9Q9P2P6 4700 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 A0A1B0GVX0 72 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 RTL8CO15255 209 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 ZNF861PO60384 105 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 BRK1Q8WUW1 75 aa3.1□□□□□ -1.91
ATPAF1-212ENST00000542495 IGLV7-46A0A075B6I9 117 aa3.09□□□□□ -1.91
ATPAF1-212ENST00000542495 V9GYY9 64 aa3.09□□□□□ -1.91
ATPAF1-212ENST00000542495 DNAH2Q9P225 4427 aa3.09□□□□□ -1.92
ATPAF1-212ENST00000542495 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
ATPAF1-212ENST00000542495 C1orf195Q5TG92 126 aa3.07□□□□□ -1.92
ATPAF1-212ENST00000542495 DNAH6Q9C0G6 4158 aa3.07□□□□□ -1.92
ATPAF1-212ENST00000542495 CD164Q04900 197 aa3.07□□□□□ -1.92
ATPAF1-212ENST00000542495 Q8N9P0 234 aaPredicted RBP3.07□□□□□ -1.92
ATPAF1-212ENST00000542495 MRPL34Q9BQ48 92 aaKnown RBP3.07□□□□□ -1.92
ATPAF1-212ENST00000542495 IGHV6-1A0A0B4J1U7 121 aa3.06□□□□□ -1.92
ATPAF1-212ENST00000542495 PSPHP1O15172 72 aa3.06□□□□□ -1.92
ATPAF1-212ENST00000542495 CDK2AP2O75956 126 aa3.06□□□□□ -1.92
ATPAF1-212ENST00000542495 KRTAP15-1Q3LI76 137 aa3.06□□□□□ -1.92
ATPAF1-212ENST00000542495 ANAPC11Q9NYG5 84 aa3.06□□□□□ -1.92
ATPAF1-212ENST00000542495 A0A087X002 238 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 A8MUN3 132 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 IGLV7-43P04211 117 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 KRTAP13-3Q3SY46 172 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 Q5VV11 94 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 NOTCH2NLQ7Z3S9 236 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 COA5Q86WW8 74 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 LIMD2Q9BT23 127 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 KMT2AQ03164 3969 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 FRAS1Q86XX4 4008 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 ALMS1Q8TCU4 4167 aa3.05□□□□□ -1.92
ATPAF1-212ENST00000542495 LOC101927531A0A1B0GV80 90 aa3.04□□□□□ -1.92
ATPAF1-212ENST00000542495 C1orf134Q5TEV5 83 aa3.04□□□□□ -1.92
ATPAF1-212ENST00000542495 LY6G6CO95867 125 aa3.03□□□□□ -1.92
ATPAF1-212ENST00000542495 PCOTHQ58A44 107 aa3.03□□□□□ -1.92
ATPAF1-212ENST00000542495 SSBP3-AS1Q7Z2R9 100 aa3.03□□□□□ -1.92
ATPAF1-212ENST00000542495 NDUFS5O43920 106 aa3.02□□□□□ -1.93
ATPAF1-212ENST00000542495 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
ATPAF1-212ENST00000542495 C8orf87E5RJ46 101 aa3.02□□□□□ -1.93
ATPAF1-212ENST00000542495 Q5W150 140 aa3.02□□□□□ -1.93
ATPAF1-212ENST00000542495 DNAH5Q8TE73 4624 aa3.02□□□□□ -1.93
ATPAF1-212ENST00000542495 HRES1P13985 223 aa3.01□□□□□ -1.93
ATPAF1-212ENST00000542495 PRR15LQ9BU68 103 aa3.01□□□□□ -1.93
ATPAF1-212ENST00000542495 LINC01558Q9Y6Z2 57 aa3.01□□□□□ -1.93
ATPAF1-212ENST00000542495 CIRBP-AS1Q8TBR5 109 aa3□□□□□ -1.93
ATPAF1-212ENST00000542495 CHKB-CPT1BH3BT56 60 aa3□□□□□ -1.93
ATPAF1-212ENST00000542495 SPINK6Q6UWN8 80 aa3□□□□□ -1.93
ATPAF1-212ENST00000542495 Q6ZSA8 131 aa3□□□□□ -1.93
ATPAF1-212ENST00000542495 A8MU10 97 aa2.99□□□□□ -1.93
ATPAF1-212ENST00000542495 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
ATPAF1-212ENST00000542495 LCA10Q71F78 164 aa2.98□□□□□ -1.93
ATPAF1-212ENST00000542495 HERC2O95714 4834 aa2.98□□□□□ -1.93
ATPAF1-212ENST00000542495 SPAG11AQ6PDA7 123 aa2.97□□□□□ -1.93
ATPAF1-212ENST00000542495 PKD1P98161 4303 aa2.97□□□□□ -1.93
ATPAF1-212ENST00000542495 KRTAP16-1A8MUX0 517 aa2.97□□□□□ -1.93
ATPAF1-212ENST00000542495 LINC00313P59037 77 aa2.97□□□□□ -1.93
ATPAF1-212ENST00000542495 DMAC1Q96GE9 116 aa2.97□□□□□ -1.93
ATPAF1-212ENST00000542495 FAT2Q9NYQ8 4349 aa2.96□□□□□ -1.93
ATPAF1-212ENST00000542495 KRTAP1-4P0C5Y4 121 aa2.96□□□□□ -1.94
ATPAF1-212ENST00000542495 KRTAP10-1P60331 282 aa2.96□□□□□ -1.94
ATPAF1-212ENST00000542495 PMAIP1Q13794 54 aa2.96□□□□□ -1.94
ATPAF1-212ENST00000542495 ATP11AUNQ6ZP68 121 aa2.96□□□□□ -1.94
ATPAF1-212ENST00000542495 CDC42SE1Q9NRR8 79 aa2.96□□□□□ -1.94
ATPAF1-212ENST00000542495 LRP1BQ9NZR2 4599 aa2.95□□□□□ -1.94
ATPAF1-212ENST00000542495 A6NED7 52 aa2.95□□□□□ -1.94
ATPAF1-212ENST00000542495 IGKV2-30P06310 120 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms