RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 CSMD1Q96PZ7 3565 aa2.3□□□□□ -2.04
C2CD3-218ENST00000542484 ZFHX4Q86UP3 3567 aa2.29□□□□□ -2.04
C2CD3-218ENST00000542484 KRTAP10-1P60331 282 aa2.29□□□□□ -2.04
C2CD3-218ENST00000542484 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
C2CD3-218ENST00000542484 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
C2CD3-218ENST00000542484 TLN1Q9Y490 2541 aaKnown RBP2.29□□□□□ -2.04
C2CD3-218ENST00000542484 TLN2Q9Y4G6 2542 aa2.28□□□□□ -2.04
C2CD3-218ENST00000542484 CELSR3Q9NYQ7 3312 aa2.28□□□□□ -2.04
C2CD3-218ENST00000542484 LRBAP50851 2863 aa2.28□□□□□ -2.04
C2CD3-218ENST00000542484 SMG1Q96Q15 3661 aaKnown RBP2.28□□□□□ -2.04
C2CD3-218ENST00000542484 BOD1L1Q8NFC6 3051 aa2.27□□□□□ -2.05
C2CD3-218ENST00000542484 FN1P02751 2386 aaKnown RBP2.27□□□□□ -2.05
C2CD3-218ENST00000542484 CELSR2Q9HCU4 2923 aa2.26□□□□□ -2.05
C2CD3-218ENST00000542484 RIF1Q5UIP0 2472 aaKnown RBP2.26□□□□□ -2.05
C2CD3-218ENST00000542484 ANKRD11Q6UB99 2663 aaPredicted RBP2.26□□□□□ -2.05
C2CD3-218ENST00000542484 SETXQ7Z333 2677 aaKnown RBP2.26□□□□□ -2.05
C2CD3-218ENST00000542484 SPENQ96T58 3664 aaKnown RBP2.26□□□□□ -2.05
C2CD3-218ENST00000542484 OTOGLQ3ZCN5 2332 aa2.25□□□□□ -2.05
C2CD3-218ENST00000542484 JMJD1CQ15652 2540 aa2.25□□□□□ -2.05
C2CD3-218ENST00000542484 PTPN13Q12923 2485 aa2.25□□□□□ -2.05
C2CD3-218ENST00000542484 C10orf95Q9H7T3 257 aa2.25□□□□□ -2.05
C2CD3-218ENST00000542484 ADGRG4Q8IZF6 3080 aa2.25□□□□□ -2.05
C2CD3-218ENST00000542484 APCP25054 2843 aa2.23□□□□□ -2.05
C2CD3-218ENST00000542484 DMXL1Q9Y485 3027 aa2.23□□□□□ -2.05
C2CD3-218ENST00000542484 ASH1LQ9NR48 2969 aaKnown RBP2.23□□□□□ -2.05
C2CD3-218ENST00000542484 DEFB123Q8N688 67 aa2.23□□□□□ -2.05
C2CD3-218ENST00000542484 SPACA4Q8TDM5 124 aa2.23□□□□□ -2.05
C2CD3-218ENST00000542484 CELSR1Q9NYQ6 3014 aa2.23□□□□□ -2.05
C2CD3-218ENST00000542484 HIVEP3Q5T1R4 2406 aa2.23□□□□□ -2.05
C2CD3-218ENST00000542484 OTOGQ6ZRI0 2925 aa2.23□□□□□ -2.05
C2CD3-218ENST00000542484 MYO15AQ9UKN7 3530 aa2.22□□□□□ -2.05
C2CD3-218ENST00000542484 F8P00451 2351 aa2.22□□□□□ -2.05
C2CD3-218ENST00000542484 COL12A1Q99715 3063 aa2.21□□□□□ -2.05
C2CD3-218ENST00000542484 FLG2Q5D862 2391 aaPredicted RBP2.21□□□□□ -2.06
C2CD3-218ENST00000542484 HIVEP2P31629 2446 aa2.21□□□□□ -2.06
C2CD3-218ENST00000542484 ZFYVE26Q68DK2 2539 aa2.21□□□□□ -2.06
C2CD3-218ENST00000542484 MYO9AB2RTY4 2548 aa2.2□□□□□ -2.06
C2CD3-218ENST00000542484 TEX15Q9BXT5 2789 aa2.2□□□□□ -2.06
C2CD3-218ENST00000542484 CEP295Q9C0D2 2601 aa2.2□□□□□ -2.06
C2CD3-218ENST00000542484 PLAC4Q8WY50 150 aa2.2□□□□□ -2.06
C2CD3-218ENST00000542484 APLNQ9ULZ1 77 aa2.19□□□□□ -2.06
C2CD3-218ENST00000542484 S4R3F8 94 aa2.19□□□□□ -2.06
C2CD3-218ENST00000542484 UTP20O75691 2785 aaKnown RBP2.19□□□□□ -2.06
C2CD3-218ENST00000542484 AKAP9Q99996 3911 aa2.19□□□□□ -2.06
C2CD3-218ENST00000542484 ATMQ13315 3056 aa2.19□□□□□ -2.06
C2CD3-218ENST00000542484 USP9XQ93008 2570 aaPredicted RBP2.18□□□□□ -2.06
C2CD3-218ENST00000542484 LOC400499M0QZD8 3231 aa2.18□□□□□ -2.06
C2CD3-218ENST00000542484 GCN1Q92616 2671 aaKnown RBP2.18□□□□□ -2.06
C2CD3-218ENST00000542484 NF1P21359 2839 aa2.18□□□□□ -2.06
C2CD3-218ENST00000542484 A0A0D9SG42 100 aa2.17□□□□□ -2.06
C2CD3-218ENST00000542484 UBE2DNLQ8IWF7 75 aa2.17□□□□□ -2.06
C2CD3-218ENST00000542484 SONP18583 2426 aaKnown RBP2.17□□□□□ -2.06
C2CD3-218ENST00000542484 NAV2Q8IVL1 2488 aa2.16□□□□□ -2.06
C2CD3-218ENST00000542484 NBEAL2Q6ZNJ1 2754 aa2.15□□□□□ -2.07
C2CD3-218ENST00000542484 NBPF19A0A087WUL8 3843 aa2.14□□□□□ -2.07
C2CD3-218ENST00000542484 MTORP42345 2549 aa2.14□□□□□ -2.07
C2CD3-218ENST00000542484 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
C2CD3-218ENST00000542484 PRO2289Q9P1D8 64 aa2.14□□□□□ -2.07
C2CD3-218ENST00000542484 R4GN34 69 aa2.14□□□□□ -2.07
C2CD3-218ENST00000542484 MUC6Q6W4X9 2439 aa2.14□□□□□ -2.07
C2CD3-218ENST00000542484 DOPEY1Q5JWR5 2465 aa2.14□□□□□ -2.07
C2CD3-218ENST00000542484 UNC79Q9P2D8 2635 aa2.14□□□□□ -2.07
C2CD3-218ENST00000542484 BSNQ9UPA5 3926 aa2.13□□□□□ -2.07
C2CD3-218ENST00000542484 MXRA5Q9NR99 2828 aa2.12□□□□□ -2.07
C2CD3-218ENST00000542484 ASPMQ8IZT6 3477 aa2.12□□□□□ -2.07
C2CD3-218ENST00000542484 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
C2CD3-218ENST00000542484 RPS29P62273 56 aaKnown RBP2.12□□□□□ -2.07
C2CD3-218ENST00000542484 Q6ZRN7 208 aaPredicted RBP2.12□□□□□ -2.07
C2CD3-218ENST00000542484 DNAH1Q9P2D7 4330 aa2.12□□□□□ -2.07
C2CD3-218ENST00000542484 UBR5O95071 2799 aaPredicted RBP2.12□□□□□ -2.07
C2CD3-218ENST00000542484 EPG5Q9HCE0 2579 aa2.11□□□□□ -2.07
C2CD3-218ENST00000542484 RELNP78509 3460 aa2.11□□□□□ -2.07
C2CD3-218ENST00000542484 USP9YO00507 2555 aaPredicted RBP2.11□□□□□ -2.07
C2CD3-218ENST00000542484 CHD8Q9HCK8 2581 aa2.11□□□□□ -2.07
C2CD3-218ENST00000542484 CRYBG3Q68DQ2 2970 aa2.11□□□□□ -2.07
C2CD3-218ENST00000542484 CCDC168Q8NDH2 2452 aa2.11□□□□□ -2.07
C2CD3-218ENST00000542484 LRRK2Q5S007 2527 aa2.11□□□□□ -2.07
C2CD3-218ENST00000542484 PKD1L2Q7Z442 2459 aa2.1□□□□□ -2.07
C2CD3-218ENST00000542484 PIEZO1Q92508 2521 aa2.1□□□□□ -2.07
C2CD3-218ENST00000542484 ZNF462Q96JM2 2506 aa2.1□□□□□ -2.07
C2CD3-218ENST00000542484 LAMA5O15230 3695 aa2.1□□□□□ -2.07
C2CD3-218ENST00000542484 M0QZ58 72 aa2.09□□□□□ -2.07
C2CD3-218ENST00000542484 EYSQ5T1H1 3165 aa2.09□□□□□ -2.08
C2CD3-218ENST00000542484 SVEP1Q4LDE5 3571 aa2.09□□□□□ -2.08
C2CD3-218ENST00000542484 CENPEQ02224 2701 aa2.08□□□□□ -2.08
C2CD3-218ENST00000542484 CFAP46Q8IYW2 2715 aa2.08□□□□□ -2.08
C2CD3-218ENST00000542484 SRRM2Q9UQ35 2752 aaKnown RBP2.08□□□□□ -2.08
C2CD3-218ENST00000542484 TTC28Q96AY4 2481 aa2.08□□□□□ -2.08
C2CD3-218ENST00000542484 HIVEP1P15822 2718 aa2.08□□□□□ -2.08
C2CD3-218ENST00000542484 INE1O15225 51 aa2.07□□□□□ -2.08
C2CD3-218ENST00000542484 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
C2CD3-218ENST00000542484 BAHCC1Q9P281 2608 aa2.07□□□□□ -2.08
C2CD3-218ENST00000542484 ZNF292O60281 2723 aa2.06□□□□□ -2.08
C2CD3-218ENST00000542484 ANK3Q12955 4377 aaKnown RBP2.06□□□□□ -2.08
C2CD3-218ENST00000542484 FBN2P35556 2912 aa2.06□□□□□ -2.08
C2CD3-218ENST00000542484 BDP1A6H8Y1 2624 aa2.05□□□□□ -2.08
C2CD3-218ENST00000542484 TENM4Q6N022 2769 aa2.05□□□□□ -2.08
C2CD3-218ENST00000542484 ACACBO00763 2458 aa2.05□□□□□ -2.08
C2CD3-218ENST00000542484 SETD2Q9BYW2 2564 aaPredicted RBP2.05□□□□□ -2.08
C2CD3-218ENST00000542484 ZFHX2Q9C0A1 2572 aaPredicted RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms