RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 ANAPC11Q9NYG5 84 aa7.7□□□□□ -1.18
KDM3A-216ENST00000542128 IGLV5-37A0A075B6J1 123 aa7.69□□□□□ -1.18
KDM3A-216ENST00000542128 LINC00472Q9H8W2 130 aa7.69□□□□□ -1.18
KDM3A-216ENST00000542128 COX6B2Q6YFQ2 88 aa7.69□□□□□ -1.18
KDM3A-216ENST00000542128 IGLV7-43P04211 117 aa7.69□□□□□ -1.18
KDM3A-216ENST00000542128 CRIPTQ9P021 101 aa7.69□□□□□ -1.18
KDM3A-216ENST00000542128 SPRR1AP35321 89 aa7.67□□□□□ -1.18
KDM3A-216ENST00000542128 TENM3Q9P273 2699 aa7.66□□□□□ -1.18
KDM3A-216ENST00000542128 FBN1P35555 2871 aaKnown RBP7.66□□□□□ -1.18
KDM3A-216ENST00000542128 SPATA8Q6RVD6 105 aa7.66□□□□□ -1.18
KDM3A-216ENST00000542128 Q96NJ1 140 aa7.65□□□□□ -1.19
KDM3A-216ENST00000542128 TENM1Q9UKZ4 2725 aa7.64□□□□□ -1.19
KDM3A-216ENST00000542128 KRTAP21-3Q3LHN1 58 aa7.64□□□□□ -1.19
KDM3A-216ENST00000542128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.61□□□□□ -1.19
KDM3A-216ENST00000542128 PDZD2O15018 2839 aa7.6□□□□□ -1.19
KDM3A-216ENST00000542128 VWFP04275 2813 aa7.6□□□□□ -1.19
KDM3A-216ENST00000542128 DMAC1Q96GE9 116 aa7.59□□□□□ -1.19
KDM3A-216ENST00000542128 C9orf92A6NGG3 77 aa7.59□□□□□ -1.2
KDM3A-216ENST00000542128 Q6ZR54 194 aa7.59□□□□□ -1.2
KDM3A-216ENST00000542128 PKD1L1Q8TDX9 2849 aa7.58□□□□□ -1.2
KDM3A-216ENST00000542128 A0A1B0GU33 70 aa7.58□□□□□ -1.2
KDM3A-216ENST00000542128 Q8N1X5 172 aa7.58□□□□□ -1.2
KDM3A-216ENST00000542128 ROMO1P60602 79 aa7.56□□□□□ -1.2
KDM3A-216ENST00000542128 KRTAP1-5Q9BYS1 174 aa7.55□□□□□ -1.2
KDM3A-216ENST00000542128 KRTAP16-1A8MUX0 517 aa7.54□□□□□ -1.2
KDM3A-216ENST00000542128 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
KDM3A-216ENST00000542128 KRTAP4-16G5E9R7 235 aaPredicted RBP7.53□□□□□ -1.2
KDM3A-216ENST00000542128 KRTAP26-1Q6PEX3 210 aa7.51□□□□□ -1.21
KDM3A-216ENST00000542128 A0A087X002 238 aa7.5□□□□□ -1.21
KDM3A-216ENST00000542128 TENM2Q9NT68 2774 aa7.49□□□□□ -1.21
KDM3A-216ENST00000542128 A0A0D9SG42 100 aa7.49□□□□□ -1.21
KDM3A-216ENST00000542128 Q5VSD8 79 aa7.49□□□□□ -1.21
KDM3A-216ENST00000542128 Q5W150 140 aa7.48□□□□□ -1.21
KDM3A-216ENST00000542128 ZNF469Q96JG9 3925 aaPredicted RBP7.48□□□□□ -1.21
KDM3A-216ENST00000542128 SPRR1BP22528 89 aa7.48□□□□□ -1.21
KDM3A-216ENST00000542128 KRTAP10-2P60368 255 aa7.48□□□□□ -1.21
KDM3A-216ENST00000542128 A0A0A0MQY5 61 aa7.47□□□□□ -1.21
KDM3A-216ENST00000542128 KRTAP10-1P60331 282 aa7.46□□□□□ -1.22
KDM3A-216ENST00000542128 PLAC8Q9NZF1 115 aa7.44□□□□□ -1.22
KDM3A-216ENST00000542128 NDUFAF8A1L188 74 aa7.43□□□□□ -1.22
KDM3A-216ENST00000542128 LUZP6Q538Z0 58 aa7.37□□□□□ -1.23
KDM3A-216ENST00000542128 Q6ZSA8 131 aa7.37□□□□□ -1.23
KDM3A-216ENST00000542128 TRRAPQ9Y4A5 3859 aa7.36□□□□□ -1.23
KDM3A-216ENST00000542128 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
KDM3A-216ENST00000542128 M0R2T5 61 aa7.34□□□□□ -1.23
KDM3A-216ENST00000542128 A8MUU9 505 aa7.33□□□□□ -1.24
KDM3A-216ENST00000542128 TGP01266 2768 aa7.29□□□□□ -1.24
KDM3A-216ENST00000542128 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
KDM3A-216ENST00000542128 SRRM2Q9UQ35 2752 aaKnown RBP7.27□□□□□ -1.25
KDM3A-216ENST00000542128 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
KDM3A-216ENST00000542128 PANO1I0J062 215 aa7.24□□□□□ -1.25
KDM3A-216ENST00000542128 LINC00483Q53H64 154 aa7.24□□□□□ -1.25
KDM3A-216ENST00000542128 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
KDM3A-216ENST00000542128 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.25
KDM3A-216ENST00000542128 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
KDM3A-216ENST00000542128 SEC61BP60468 96 aaKnown RBP7.18□□□□□ -1.26
KDM3A-216ENST00000542128 Q6ZRN7 208 aaPredicted RBP7.16□□□□□ -1.26
KDM3A-216ENST00000542128 ANK3Q12955 4377 aaKnown RBP7.09□□□□□ -1.27
KDM3A-216ENST00000542128 AKAP9Q99996 3911 aa7.02□□□□□ -1.29
KDM3A-216ENST00000542128 H0YAA0 97 aa7.02□□□□□ -1.29
KDM3A-216ENST00000542128 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
KDM3A-216ENST00000542128 KRTAP13-1Q8IUC0 172 aa6.94□□□□□ -1.3
KDM3A-216ENST00000542128 P0C880 135 aa6.88□□□□□ -1.31
KDM3A-216ENST00000542128 S4R3F8 94 aa6.87□□□□□ -1.31
KDM3A-216ENST00000542128 FBN3Q75N90 2809 aa6.86□□□□□ -1.31
KDM3A-216ENST00000542128 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
KDM3A-216ENST00000542128 CSMD3Q7Z407 3707 aa6.85□□□□□ -1.31
KDM3A-216ENST00000542128 KRTAP13-2Q52LG2 175 aa6.82□□□□□ -1.32
KDM3A-216ENST00000542128 KRTAP13-3Q3SY46 172 aa6.8□□□□□ -1.32
KDM3A-216ENST00000542128 R4GN34 69 aa6.77□□□□□ -1.33
KDM3A-216ENST00000542128 COL7A1Q02388 2944 aa6.76□□□□□ -1.33
KDM3A-216ENST00000542128 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
KDM3A-216ENST00000542128 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
KDM3A-216ENST00000542128 M0QZ58 72 aa6.68□□□□□ -1.34
KDM3A-216ENST00000542128 MEGF8Q7Z7M0 2845 aa6.67□□□□□ -1.34
KDM3A-216ENST00000542128 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
KDM3A-216ENST00000542128 KRTAP1-4P0C5Y4 121 aa6.59□□□□□ -1.35
KDM3A-216ENST00000542128 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
KDM3A-216ENST00000542128 DNHD1Q96M86 4753 aa6.52□□□□□ -1.37
KDM3A-216ENST00000542128 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
KDM3A-216ENST00000542128 XP32Q5T750 250 aa6.48□□□□□ -1.37
KDM3A-216ENST00000542128 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
KDM3A-216ENST00000542128 ANK2Q01484 3957 aa6.47□□□□□ -1.37
KDM3A-216ENST00000542128 HUWE1Q7Z6Z7 4374 aaKnown RBP6.42□□□□□ -1.38
KDM3A-216ENST00000542128 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
KDM3A-216ENST00000542128 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
KDM3A-216ENST00000542128 PRKDCP78527 4128 aaKnown RBP6.31□□□□□ -1.4
KDM3A-216ENST00000542128 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
KDM3A-216ENST00000542128 LYSTQ99698 3801 aa6.29□□□□□ -1.4
KDM3A-216ENST00000542128 DNAH9Q9NYC9 4486 aa6.28□□□□□ -1.4
KDM3A-216ENST00000542128 DNAH10Q8IVF4 4471 aa6.28□□□□□ -1.4
KDM3A-216ENST00000542128 KRTAP13-4Q3LI77 160 aa6.28□□□□□ -1.4
KDM3A-216ENST00000542128 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
KDM3A-216ENST00000542128 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
KDM3A-216ENST00000542128 PLECQ15149 4684 aaKnown RBP6.26□□□□□ -1.41
KDM3A-216ENST00000542128 TNP1P09430 55 aa6.23□□□□□ -1.41
KDM3A-216ENST00000542128 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.42
KDM3A-216ENST00000542128 STARD9Q9P2P6 4700 aa6.19□□□□□ -1.42
KDM3A-216ENST00000542128 CMYA5Q8N3K9 4069 aa6.13□□□□□ -1.43
KDM3A-216ENST00000542128 KMT2AQ03164 3969 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms