RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 PDE6GP18545 87 aa7.11□□□□□ -1.27
CCDC130-202ENST00000540216 ATP11AUNQ6ZP68 121 aa7.11□□□□□ -1.27
CCDC130-202ENST00000540216 Q6ZQT0 140 aa7.1□□□□□ -1.27
CCDC130-202ENST00000540216 C20orf166-AS1Q96NR2 134 aa7.1□□□□□ -1.27
CCDC130-202ENST00000540216 A8MUU9 505 aa7.08□□□□□ -1.28
CCDC130-202ENST00000540216 DSCR10P59022 87 aa7.08□□□□□ -1.28
CCDC130-202ENST00000540216 LINC00313P59037 77 aa7.08□□□□□ -1.28
CCDC130-202ENST00000540216 H3BT86 120 aa7.07□□□□□ -1.28
CCDC130-202ENST00000540216 J3KT08 172 aa7.06□□□□□ -1.28
CCDC130-202ENST00000540216 DEFB116Q30KQ4 102 aa7.06□□□□□ -1.28
CCDC130-202ENST00000540216 C14orf132Q9NPU4 83 aa7.06□□□□□ -1.28
CCDC130-202ENST00000540216 KRTAP19-2Q3LHN2 52 aa7.04□□□□□ -1.28
CCDC130-202ENST00000540216 IGHV6-1A0A0B4J1U7 121 aa7.03□□□□□ -1.28
CCDC130-202ENST00000540216 A0A1B0GVX0 72 aa7.03□□□□□ -1.28
CCDC130-202ENST00000540216 C8orf87E5RJ46 101 aa7.03□□□□□ -1.28
CCDC130-202ENST00000540216 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
CCDC130-202ENST00000540216 KRTAP16-1A8MUX0 517 aa7.02□□□□□ -1.29
CCDC130-202ENST00000540216 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
CCDC130-202ENST00000540216 PRO0461Q9UI25 63 aa7□□□□□ -1.29
CCDC130-202ENST00000540216 NDUFB1O75438 58 aa6.99□□□□□ -1.29
CCDC130-202ENST00000540216 ETDBQ3ZM63 59 aa6.99□□□□□ -1.29
CCDC130-202ENST00000540216 NOTCH2NLQ7Z3S9 236 aa6.99□□□□□ -1.29
CCDC130-202ENST00000540216 SVIPQ8NHG7 77 aa6.99□□□□□ -1.29
CCDC130-202ENST00000540216 A8MWP4 228 aa6.96□□□□□ -1.3
CCDC130-202ENST00000540216 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.3
CCDC130-202ENST00000540216 MT1HP80294 61 aa6.95□□□□□ -1.3
CCDC130-202ENST00000540216 NREPQ16612 68 aa6.95□□□□□ -1.3
CCDC130-202ENST00000540216 IGKV3D-7A0A0C4DH55 119 aa6.91□□□□□ -1.3
CCDC130-202ENST00000540216 SMCPP49901 116 aaPredicted RBP6.91□□□□□ -1.3
CCDC130-202ENST00000540216 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.3
CCDC130-202ENST00000540216 FAM240AA0A1B0GVK7 77 aa6.89□□□□□ -1.31
CCDC130-202ENST00000540216 PRR15Q8IV56 129 aa6.89□□□□□ -1.31
CCDC130-202ENST00000540216 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
CCDC130-202ENST00000540216 Q8N9P0 234 aaPredicted RBP6.88□□□□□ -1.31
CCDC130-202ENST00000540216 ACYP1P07311 99 aa6.87□□□□□ -1.31
CCDC130-202ENST00000540216 ZCCHC13Q8WW36 166 aaKnown RBP6.86□□□□□ -1.31
CCDC130-202ENST00000540216 ANAPC13Q9BS18 74 aa6.86□□□□□ -1.31
CCDC130-202ENST00000540216 Q6ZVQ6 151 aa6.85□□□□□ -1.31
CCDC130-202ENST00000540216 M0R2T5 61 aa6.84□□□□□ -1.31
CCDC130-202ENST00000540216 BPY2O14599 106 aa6.84□□□□□ -1.31
CCDC130-202ENST00000540216 IMUPQ9GZP8 106 aa6.84□□□□□ -1.31
CCDC130-202ENST00000540216 K7EQZ3 153 aa6.83□□□□□ -1.32
CCDC130-202ENST00000540216 TMEM254Q8TBM7 123 aa6.83□□□□□ -1.32
CCDC130-202ENST00000540216 MMP24-AS1A0A0U1RRL7 71 aa6.82□□□□□ -1.32
CCDC130-202ENST00000540216 MT-ATP8P03928 68 aa6.81□□□□□ -1.32
CCDC130-202ENST00000540216 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
CCDC130-202ENST00000540216 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
CCDC130-202ENST00000540216 RBM12B-AS1Q9P1G2 102 aa6.8□□□□□ -1.32
CCDC130-202ENST00000540216 hDV103S1A0JD37 113 aa6.79□□□□□ -1.32
CCDC130-202ENST00000540216 HRES1P13985 223 aa6.79□□□□□ -1.32
CCDC130-202ENST00000540216 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
CCDC130-202ENST00000540216 MPLKIPQ8TAP9 179 aa6.79□□□□□ -1.32
CCDC130-202ENST00000540216 UBL5Q9BZL1 73 aa6.79□□□□□ -1.32
CCDC130-202ENST00000540216 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
CCDC130-202ENST00000540216 FAM236DA0A1B0GTK5 79 aa6.77□□□□□ -1.33
CCDC130-202ENST00000540216 FAM236CP0DP71 79 aa6.77□□□□□ -1.33
CCDC130-202ENST00000540216 LINC00846Q9NV44 126 aa6.77□□□□□ -1.33
CCDC130-202ENST00000540216 SPINK7P58062 85 aa6.76□□□□□ -1.33
CCDC130-202ENST00000540216 LCE2DQ5TA82 110 aaPredicted RBP6.76□□□□□ -1.33
CCDC130-202ENST00000540216 LINC00643Q86TS7 51 aa6.73□□□□□ -1.33
CCDC130-202ENST00000540216 FLGP20930 4061 aaPredicted RBP6.72□□□□□ -1.33
CCDC130-202ENST00000540216 NDUFS5O43920 106 aa6.72□□□□□ -1.33
CCDC130-202ENST00000540216 CASC2Q6XLA1 102 aa6.72□□□□□ -1.33
CCDC130-202ENST00000540216 Q8N9L7 120 aa6.72□□□□□ -1.33
CCDC130-202ENST00000540216 WFDC13Q8IUB5 93 aa6.7□□□□□ -1.34
CCDC130-202ENST00000540216 HCG22E2RYF7 251 aa6.67□□□□□ -1.34
CCDC130-202ENST00000540216 CXCL6P80162 114 aa6.66□□□□□ -1.34
CCDC130-202ENST00000540216 UQCRQO14949 82 aa6.65□□□□□ -1.34
CCDC130-202ENST00000540216 ATOX1O00244 68 aa6.63□□□□□ -1.35
CCDC130-202ENST00000540216 Q5W150 140 aa6.62□□□□□ -1.35
CCDC130-202ENST00000540216 C7orf65Q6ZTY9 151 aa6.62□□□□□ -1.35
CCDC130-202ENST00000540216 ATP5EP2Q5VTU8 51 aa6.61□□□□□ -1.35
CCDC130-202ENST00000540216 CCDC179H3BU77 68 aa6.6□□□□□ -1.35
CCDC130-202ENST00000540216 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
CCDC130-202ENST00000540216 IGKV2D-30A0A075B6S6 120 aa6.59□□□□□ -1.35
CCDC130-202ENST00000540216 IGKV2-30P06310 120 aa6.59□□□□□ -1.35
CCDC130-202ENST00000540216 KRTAP9-8Q9BYQ0 159 aa6.59□□□□□ -1.35
CCDC130-202ENST00000540216 FAM236AA0A1B0GUQ0 79 aa6.57□□□□□ -1.36
CCDC130-202ENST00000540216 FAM236BA0A1B0GV22 79 aa6.57□□□□□ -1.36
CCDC130-202ENST00000540216 COX7CP15954 63 aa6.57□□□□□ -1.36
CCDC130-202ENST00000540216 HIST1H4AP62805 103 aaKnown RBP6.56□□□□□ -1.36
CCDC130-202ENST00000540216 TP53AIP1Q9HCN2 124 aa6.56□□□□□ -1.36
CCDC130-202ENST00000540216 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
CCDC130-202ENST00000540216 SMIM20Q8N5G0 67 aa6.54□□□□□ -1.36
CCDC130-202ENST00000540216 TMEM258P61165 79 aa6.53□□□□□ -1.36
CCDC130-202ENST00000540216 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
CCDC130-202ENST00000540216 MT2AP02795 61 aa6.51□□□□□ -1.37
CCDC130-202ENST00000540216 SERP2Q8N6R1 65 aa6.51□□□□□ -1.37
CCDC130-202ENST00000540216 MT1FP04733 61 aa6.46□□□□□ -1.38
CCDC130-202ENST00000540216 C4orf26Q17RF5 130 aa6.46□□□□□ -1.38
CCDC130-202ENST00000540216 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
CCDC130-202ENST00000540216 C5orf47Q569G3 176 aa6.45□□□□□ -1.38
CCDC130-202ENST00000540216 TRAV22A0A0B4J277 110 aa6.42□□□□□ -1.38
CCDC130-202ENST00000540216 NDUFC1O43677 76 aa6.4□□□□□ -1.38
CCDC130-202ENST00000540216 LOC101927531A0A1B0GV80 90 aa6.39□□□□□ -1.39
CCDC130-202ENST00000540216 ATP5EP56381 51 aaPredicted RBP6.39□□□□□ -1.39
CCDC130-202ENST00000540216 C1orf64Q8NEQ6 169 aa6.38□□□□□ -1.39
CCDC130-202ENST00000540216 KRTAP9-3Q9BYQ3 159 aa6.38□□□□□ -1.39
CCDC130-202ENST00000540216 CYP4F30PQ9H0H9 118 aa6.37□□□□□ -1.39
CCDC130-202ENST00000540216 TRAV7A0A075B6U4 112 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms