RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 IFI27L1Q96BM0 104 aa1.63□□□□□ -2.15
C2CD3-214ENST00000540057 SIGMAR1Q99720 223 aa1.63□□□□□ -2.15
C2CD3-214ENST00000540057 NHP2Q9NX24 153 aaKnown RBP1.63□□□□□ -2.15
C2CD3-214ENST00000540057 A0A087WSZ3 146 aa1.62□□□□□ -2.15
C2CD3-214ENST00000540057 A4D1N5 150 aa1.62□□□□□ -2.15
C2CD3-214ENST00000540057 H3BUT2 72 aa1.62□□□□□ -2.15
C2CD3-214ENST00000540057 FABP9Q0Z7S8 132 aa1.62□□□□□ -2.15
C2CD3-214ENST00000540057 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
C2CD3-214ENST00000540057 IGKV4-1P06312 121 aa1.61□□□□□ -2.15
C2CD3-214ENST00000540057 Q6ZQY7 126 aa1.61□□□□□ -2.15
C2CD3-214ENST00000540057 TEN1Q86WV5 123 aa1.61□□□□□ -2.15
C2CD3-214ENST00000540057 SEC11CQ9BY50 192 aa1.61□□□□□ -2.15
C2CD3-214ENST00000540057 SERF1AO75920 110 aa1.6□□□□□ -2.15
C2CD3-214ENST00000540057 MT4P47944 62 aa1.6□□□□□ -2.15
C2CD3-214ENST00000540057 HERVK_113P61574 105 aa1.6□□□□□ -2.15
C2CD3-214ENST00000540057 MT1XP80297 61 aa1.6□□□□□ -2.15
C2CD3-214ENST00000540057 LINC00575Q6W349 94 aa1.6□□□□□ -2.15
C2CD3-214ENST00000540057 IGHV6-1A0A0B4J1U7 121 aa1.59□□□□□ -2.15
C2CD3-214ENST00000540057 hADV29S1A0JD25 119 aa1.59□□□□□ -2.15
C2CD3-214ENST00000540057 A6NDN8 102 aa1.59□□□□□ -2.15
C2CD3-214ENST00000540057 H0Y8G0 127 aa1.59□□□□□ -2.15
C2CD3-214ENST00000540057 TIMM17BO60830 172 aa1.59□□□□□ -2.15
C2CD3-214ENST00000540057 KLKP1Q107X0 134 aa1.59□□□□□ -2.15
C2CD3-214ENST00000540057 COX19Q49B96 90 aa1.59□□□□□ -2.15
C2CD3-214ENST00000540057 C5orf47Q569G3 176 aa1.59□□□□□ -2.15
C2CD3-214ENST00000540057 SMIM11BQ8TCY0 68 aa1.59□□□□□ -2.15
C2CD3-214ENST00000540057 PRO2289Q9P1D8 64 aa1.59□□□□□ -2.15
C2CD3-214ENST00000540057 E9PLD3 99 aa1.58□□□□□ -2.16
C2CD3-214ENST00000540057 C3orf79P0CE67 100 aa1.58□□□□□ -2.16
C2CD3-214ENST00000540057 PLNP26678 52 aa1.58□□□□□ -2.16
C2CD3-214ENST00000540057 DEFB116Q30KQ4 102 aa1.58□□□□□ -2.16
C2CD3-214ENST00000540057 PMCHL2Q9BQD1 86 aa1.58□□□□□ -2.16
C2CD3-214ENST00000540057 SNHG12Q9BXW3 62 aa1.58□□□□□ -2.16
C2CD3-214ENST00000540057 C8orf87E5RJ46 101 aa1.57□□□□□ -2.16
C2CD3-214ENST00000540057 DPM2O94777 84 aa1.57□□□□□ -2.16
C2CD3-214ENST00000540057 IGKCP01834 107 aa1.57□□□□□ -2.16
C2CD3-214ENST00000540057 S100PP25815 95 aa1.57□□□□□ -2.16
C2CD3-214ENST00000540057 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.57□□□□□ -2.16
C2CD3-214ENST00000540057 PPDPFLQ8WWR9 84 aa1.57□□□□□ -2.16
C2CD3-214ENST00000540057 VAMP3Q15836 100 aa1.56□□□□□ -2.16
C2CD3-214ENST00000540057 CHCHD1Q96BP2 118 aaKnown RBP1.56□□□□□ -2.16
C2CD3-214ENST00000540057 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
C2CD3-214ENST00000540057 TRAPPC1Q9Y5R8 145 aa1.56□□□□□ -2.16
C2CD3-214ENST00000540057 A0A1B0GVX0 72 aa1.55□□□□□ -2.16
C2CD3-214ENST00000540057 CXCL6P80162 114 aa1.55□□□□□ -2.16
C2CD3-214ENST00000540057 RAB37Q96AX2 223 aa1.55□□□□□ -2.16
C2CD3-214ENST00000540057 TTTY13Q9BZ97 58 aa1.55□□□□□ -2.16
C2CD3-214ENST00000540057 HSPB8Q9UJY1 196 aa1.55□□□□□ -2.16
C2CD3-214ENST00000540057 IGKV3D-7A0A0C4DH55 119 aa1.54□□□□□ -2.16
C2CD3-214ENST00000540057 LEPROTL1O95214 131 aa1.54□□□□□ -2.16
C2CD3-214ENST00000540057 RBM3P98179 157 aaKnown RBP1.54□□□□□ -2.16
C2CD3-214ENST00000540057 LYRM7Q5U5X0 104 aa1.54□□□□□ -2.16
C2CD3-214ENST00000540057 LCA10Q71F78 164 aa1.54□□□□□ -2.16
C2CD3-214ENST00000540057 PRR15Q8IV56 129 aa1.54□□□□□ -2.16
C2CD3-214ENST00000540057 DSCR8Q96T75 97 aa1.54□□□□□ -2.16
C2CD3-214ENST00000540057 HSBP1O75506 76 aa1.53□□□□□ -2.16
C2CD3-214ENST00000540057 IFITM1P13164 125 aa1.53□□□□□ -2.16
C2CD3-214ENST00000540057 CSAG1Q6PB30 78 aa1.53□□□□□ -2.16
C2CD3-214ENST00000540057 MUSTN1Q8IVN3 82 aa1.53□□□□□ -2.16
C2CD3-214ENST00000540057 CRIPTQ9P021 101 aa1.53□□□□□ -2.16
C2CD3-214ENST00000540057 TRBV7-4A0A0J9YYF1 115 aa1.52□□□□□ -2.17
C2CD3-214ENST00000540057 H3BMG7 143 aa1.52□□□□□ -2.17
C2CD3-214ENST00000540057 COPS9Q8WXC6 57 aa1.52□□□□□ -2.17
C2CD3-214ENST00000540057 FABP4P15090 132 aa1.51□□□□□ -2.17
C2CD3-214ENST00000540057 C12orf57Q99622 126 aa1.51□□□□□ -2.17
C2CD3-214ENST00000540057 S4R3F8 94 aa1.51□□□□□ -2.17
C2CD3-214ENST00000540057 TRGC2P03986 189 aa1.5□□□□□ -2.17
C2CD3-214ENST00000540057 C4orf26Q17RF5 130 aa1.5□□□□□ -2.17
C2CD3-214ENST00000540057 SCGB1D4Q6XE38 83 aa1.5□□□□□ -2.17
C2CD3-214ENST00000540057 CEND1Q8N111 149 aa1.5□□□□□ -2.17
C2CD3-214ENST00000540057 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
C2CD3-214ENST00000540057 TMEM218A2RU14 115 aa1.49□□□□□ -2.17
C2CD3-214ENST00000540057 BVES-AS1Q5T3Y7 98 aa1.49□□□□□ -2.17
C2CD3-214ENST00000540057 PLAC4Q8WY50 150 aa1.49□□□□□ -2.17
C2CD3-214ENST00000540057 C8orf17Q9NRJ1 99 aa1.49□□□□□ -2.17
C2CD3-214ENST00000540057 FABP2P12104 132 aa1.48□□□□□ -2.17
C2CD3-214ENST00000540057 C7orf65Q6ZTY9 151 aa1.48□□□□□ -2.17
C2CD3-214ENST00000540057 C2orf91Q6ZV80 131 aa1.48□□□□□ -2.17
C2CD3-214ENST00000540057 KRTAP19-3Q7Z4W3 81 aa1.48□□□□□ -2.17
C2CD3-214ENST00000540057 ANKRD29Q8N6D5 301 aa1.48□□□□□ -2.17
C2CD3-214ENST00000540057 Q8N9L7 120 aa1.48□□□□□ -2.17
C2CD3-214ENST00000540057 J3KT08 172 aa1.47□□□□□ -2.17
C2CD3-214ENST00000540057 TRACP01848 142 aa1.47□□□□□ -2.17
C2CD3-214ENST00000540057 CCKP06307 115 aa1.47□□□□□ -2.17
C2CD3-214ENST00000540057 CYSTM1Q9H1C7 97 aa1.47□□□□□ -2.17
C2CD3-214ENST00000540057 A0A1B0GV72 72 aa1.46□□□□□ -2.18
C2CD3-214ENST00000540057 A8MUN3 132 aa1.46□□□□□ -2.18
C2CD3-214ENST00000540057 SYS1-DBNDD2H3BUS1 97 aa1.46□□□□□ -2.18
C2CD3-214ENST00000540057 NDUFB1O75438 58 aa1.46□□□□□ -2.18
C2CD3-214ENST00000540057 Q5W150 140 aa1.46□□□□□ -2.18
C2CD3-214ENST00000540057 UQCC3Q6UW78 93 aa1.46□□□□□ -2.18
C2CD3-214ENST00000540057 PDE6GP18545 87 aa1.45□□□□□ -2.18
C2CD3-214ENST00000540057 KRTAP19-7Q3SYF9 63 aa1.45□□□□□ -2.18
C2CD3-214ENST00000540057 LINC01545Q5VT33 79 aa1.45□□□□□ -2.18
C2CD3-214ENST00000540057 YPEL4Q96NS1 127 aa1.45□□□□□ -2.18
C2CD3-214ENST00000540057 MRPL34Q9BQ48 92 aaKnown RBP1.45□□□□□ -2.18
C2CD3-214ENST00000540057 K7EQZ3 153 aa1.44□□□□□ -2.18
C2CD3-214ENST00000540057 SNCGO76070 127 aa1.44□□□□□ -2.18
C2CD3-214ENST00000540057 MT1EP04732 61 aa1.44□□□□□ -2.18
C2CD3-214ENST00000540057 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms