RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 Q5W150 140 aa8.29□□□□□ -1.08
SCNN1A-215ENST00000540037 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
SCNN1A-215ENST00000540037 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
SCNN1A-215ENST00000540037 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
SCNN1A-215ENST00000540037 SPACA4Q8TDM5 124 aa8.28□□□□□ -1.08
SCNN1A-215ENST00000540037 NBDYA0A0U1RRE5 68 aa8.27□□□□□ -1.08
SCNN1A-215ENST00000540037 HECTD4Q9Y4D8 3996 aa8.27□□□□□ -1.09
SCNN1A-215ENST00000540037 CDK2AP2O75956 126 aa8.27□□□□□ -1.09
SCNN1A-215ENST00000540037 LINC00483Q53H64 154 aa8.27□□□□□ -1.09
SCNN1A-215ENST00000540037 PSORS1C2Q9UIG4 136 aa8.26□□□□□ -1.09
SCNN1A-215ENST00000540037 RBM12B-AS1Q9P1G2 102 aa8.24□□□□□ -1.09
SCNN1A-215ENST00000540037 MDFIQ99750 246 aa8.24□□□□□ -1.09
SCNN1A-215ENST00000540037 DYNC2H1Q8NCM8 4307 aaKnown RBP8.24□□□□□ -1.09
SCNN1A-215ENST00000540037 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
SCNN1A-215ENST00000540037 KMT2AQ03164 3969 aa8.22□□□□□ -1.09
SCNN1A-215ENST00000540037 H3BS24 57 aa8.21□□□□□ -1.1
SCNN1A-215ENST00000540037 IGLV5-52A0A0A0MRZ9 124 aa8.19□□□□□ -1.1
SCNN1A-215ENST00000540037 DNAH17Q9UFH2 4485 aa8.19□□□□□ -1.1
SCNN1A-215ENST00000540037 FBN3Q75N90 2809 aa8.19□□□□□ -1.1
SCNN1A-215ENST00000540037 RETNLBQ9BQ08 111 aa8.18□□□□□ -1.1
SCNN1A-215ENST00000540037 TGP01266 2768 aa8.18□□□□□ -1.1
SCNN1A-215ENST00000540037 KRTAP13-3Q3SY46 172 aa8.17□□□□□ -1.1
SCNN1A-215ENST00000540037 CIRBP-AS1Q8TBR5 109 aa8.16□□□□□ -1.1
SCNN1A-215ENST00000540037 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
SCNN1A-215ENST00000540037 A0A087WTM6 91 aa8.16□□□□□ -1.1
SCNN1A-215ENST00000540037 ZNF861PO60384 105 aa8.16□□□□□ -1.1
SCNN1A-215ENST00000540037 DNAH2Q9P225 4427 aa8.15□□□□□ -1.1
SCNN1A-215ENST00000540037 RTL8CO15255 209 aa8.14□□□□□ -1.11
SCNN1A-215ENST00000540037 MEGF8Q7Z7M0 2845 aa8.14□□□□□ -1.11
SCNN1A-215ENST00000540037 ALMS1Q8TCU4 4167 aa8.12□□□□□ -1.11
SCNN1A-215ENST00000540037 C7orf65Q6ZTY9 151 aa8.12□□□□□ -1.11
SCNN1A-215ENST00000540037 VPS13DQ5THJ4 4388 aa8.11□□□□□ -1.11
SCNN1A-215ENST00000540037 DNAH6Q9C0G6 4158 aa8.08□□□□□ -1.12
SCNN1A-215ENST00000540037 ACYP2P14621 99 aa8.08□□□□□ -1.12
SCNN1A-215ENST00000540037 PRAC1Q96KF2 57 aa8.07□□□□□ -1.12
SCNN1A-215ENST00000540037 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
SCNN1A-215ENST00000540037 NUPR2A6NF83 97 aa8.05□□□□□ -1.12
SCNN1A-215ENST00000540037 PRKDCP78527 4128 aaKnown RBP8.04□□□□□ -1.12
SCNN1A-215ENST00000540037 IGLV7-43P04211 117 aa8.04□□□□□ -1.12
SCNN1A-215ENST00000540037 DMAC1Q96GE9 116 aa8.03□□□□□ -1.12
SCNN1A-215ENST00000540037 LINC00313P59037 77 aa8.03□□□□□ -1.12
SCNN1A-215ENST00000540037 DNAH11Q96DT5 4516 aa8□□□□□ -1.13
SCNN1A-215ENST00000540037 A0A1B0GU69 56 aa7.99□□□□□ -1.13
SCNN1A-215ENST00000540037 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
SCNN1A-215ENST00000540037 C8orf87E5RJ46 101 aa7.96□□□□□ -1.13
SCNN1A-215ENST00000540037 IGKV2-30P06310 120 aa7.96□□□□□ -1.14
SCNN1A-215ENST00000540037 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
SCNN1A-215ENST00000540037 IGKV2D-30A0A075B6S6 120 aa7.94□□□□□ -1.14
SCNN1A-215ENST00000540037 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
SCNN1A-215ENST00000540037 SSBP3-AS1Q7Z2R9 100 aa7.92□□□□□ -1.14
SCNN1A-215ENST00000540037 DNAH5Q8TE73 4624 aa7.92□□□□□ -1.14
SCNN1A-215ENST00000540037 LRP1BQ9NZR2 4599 aa7.91□□□□□ -1.14
SCNN1A-215ENST00000540037 KRTAP16-1A8MUX0 517 aa7.91□□□□□ -1.14
SCNN1A-215ENST00000540037 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
SCNN1A-215ENST00000540037 J3QL48 77 aa7.88□□□□□ -1.15
SCNN1A-215ENST00000540037 KRTAP10-2P60368 255 aa7.88□□□□□ -1.15
SCNN1A-215ENST00000540037 MIR22HGQ0VDD5 57 aa7.88□□□□□ -1.15
SCNN1A-215ENST00000540037 C1orf134Q5TEV5 83 aa7.88□□□□□ -1.15
SCNN1A-215ENST00000540037 PLA2G1BP04054 148 aaKnown RBP7.86□□□□□ -1.15
SCNN1A-215ENST00000540037 SPINK1P00995 79 aa7.85□□□□□ -1.15
SCNN1A-215ENST00000540037 UQCR11O14957 56 aa7.84□□□□□ -1.15
SCNN1A-215ENST00000540037 LY6G6CO95867 125 aa7.82□□□□□ -1.16
SCNN1A-215ENST00000540037 VPS13BQ7Z7G8 4022 aa7.81□□□□□ -1.16
SCNN1A-215ENST00000540037 Q8N1X5 172 aa7.8□□□□□ -1.16
SCNN1A-215ENST00000540037 FAT2Q9NYQ8 4349 aa7.77□□□□□ -1.17
SCNN1A-215ENST00000540037 KRTAP1-4P0C5Y4 121 aa7.77□□□□□ -1.17
SCNN1A-215ENST00000540037 KRTAP10-1P60331 282 aa7.75□□□□□ -1.17
SCNN1A-215ENST00000540037 PKD1P98161 4303 aa7.75□□□□□ -1.17
SCNN1A-215ENST00000540037 HYDINQ4G0P3 5121 aa7.75□□□□□ -1.17
SCNN1A-215ENST00000540037 LINC01554Q52M75 96 aa7.75□□□□□ -1.17
SCNN1A-215ENST00000540037 CSAG1Q6PB30 78 aa7.74□□□□□ -1.17
SCNN1A-215ENST00000540037 DNHD1Q96M86 4753 aa7.67□□□□□ -1.18
SCNN1A-215ENST00000540037 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
SCNN1A-215ENST00000540037 Q6ZSA8 131 aa7.66□□□□□ -1.18
SCNN1A-215ENST00000540037 H0YAA0 97 aa7.62□□□□□ -1.19
SCNN1A-215ENST00000540037 PKHD1P08F94 4074 aa7.6□□□□□ -1.19
SCNN1A-215ENST00000540037 C9orf92A6NGG3 77 aa7.6□□□□□ -1.19
SCNN1A-215ENST00000540037 FLG2Q5D862 2391 aaPredicted RBP7.58□□□□□ -1.2
SCNN1A-215ENST00000540037 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
SCNN1A-215ENST00000540037 A8MUU9 505 aa7.53□□□□□ -1.2
SCNN1A-215ENST00000540037 LINC00304Q8N9R0 145 aa7.53□□□□□ -1.2
SCNN1A-215ENST00000540037 A0A1B0GU33 70 aa7.49□□□□□ -1.21
SCNN1A-215ENST00000540037 SMR3BP02814 79 aaPredicted RBP7.48□□□□□ -1.21
SCNN1A-215ENST00000540037 CRIPTQ9P021 101 aa7.48□□□□□ -1.21
SCNN1A-215ENST00000540037 FAT1Q14517 4588 aa7.45□□□□□ -1.22
SCNN1A-215ENST00000540037 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
SCNN1A-215ENST00000540037 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
SCNN1A-215ENST00000540037 C20orf166-AS1Q96NR2 134 aa7.42□□□□□ -1.22
SCNN1A-215ENST00000540037 SACSQ9NZJ4 4579 aa7.4□□□□□ -1.22
SCNN1A-215ENST00000540037 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
SCNN1A-215ENST00000540037 DYNC1H1Q14204 4646 aaKnown RBP7.36□□□□□ -1.23
SCNN1A-215ENST00000540037 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
SCNN1A-215ENST00000540037 PKHD1L1Q86WI1 4243 aa7.33□□□□□ -1.24
SCNN1A-215ENST00000540037 DMBT1Q9UGM3 2413 aaPredicted RBP7.31□□□□□ -1.24
SCNN1A-215ENST00000540037 ROMO1P60602 79 aa7.29□□□□□ -1.24
SCNN1A-215ENST00000540037 APOBP04114 4563 aaKnown RBP7.28□□□□□ -1.24
SCNN1A-215ENST00000540037 KRTAP13-4Q3LI77 160 aa7.25□□□□□ -1.25
SCNN1A-215ENST00000540037 A0A0D9SG42 100 aa7.24□□□□□ -1.25
SCNN1A-215ENST00000540037 KRTAP10-4P60372 401 aaPredicted RBP7.24□□□□□ -1.25
SCNN1A-215ENST00000540037 K7ERS5 55 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms