RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 IGKV4-1P06312 121 aa3.64□□□□□ -1.83
CPSF7-219ENST00000539952 TLX1NBP0CAT3 122 aa3.64□□□□□ -1.83
CPSF7-219ENST00000539952 SNURFQ9Y675 71 aa3.64□□□□□ -1.83
CPSF7-219ENST00000539952 IGLV5-37A0A075B6J1 123 aa3.63□□□□□ -1.83
CPSF7-219ENST00000539952 A0A096LNI7 61 aa3.63□□□□□ -1.83
CPSF7-219ENST00000539952 SYCNQ0VAF6 134 aa3.63□□□□□ -1.83
CPSF7-219ENST00000539952 C15orf56Q8N910 161 aa3.63□□□□□ -1.83
CPSF7-219ENST00000539952 OCR1Q9BZK8 76 aa3.63□□□□□ -1.83
CPSF7-219ENST00000539952 XAGE1AQ9HD64 81 aa3.63□□□□□ -1.83
CPSF7-219ENST00000539952 LPAP08519 4548 aa3.62□□□□□ -1.83
CPSF7-219ENST00000539952 NDUFB1O75438 58 aa3.62□□□□□ -1.83
CPSF7-219ENST00000539952 PRR4Q16378 134 aa3.62□□□□□ -1.83
CPSF7-219ENST00000539952 IGLV1-50A0A075B6I6 118 aa3.61□□□□□ -1.83
CPSF7-219ENST00000539952 ETDCA0A1B0GVM5 59 aa3.61□□□□□ -1.83
CPSF7-219ENST00000539952 PRR26Q8N8Z3 221 aa3.61□□□□□ -1.83
CPSF7-219ENST00000539952 SPRR4Q96PI1 79 aa3.61□□□□□ -1.83
CPSF7-219ENST00000539952 V9GYY9 64 aa3.61□□□□□ -1.83
CPSF7-219ENST00000539952 RPL37AP8A6NKH3 93 aa3.6□□□□□ -1.83
CPSF7-219ENST00000539952 H3BPC8 53 aa3.6□□□□□ -1.83
CPSF7-219ENST00000539952 C1orf137Q5JT78 98 aa3.6□□□□□ -1.83
CPSF7-219ENST00000539952 FP248Q71RG6 208 aaPredicted RBP3.6□□□□□ -1.83
CPSF7-219ENST00000539952 Q8N377 158 aa3.6□□□□□ -1.83
CPSF7-219ENST00000539952 SPRR1AP35321 89 aa3.59□□□□□ -1.83
CPSF7-219ENST00000539952 LCE1DQ5T752 114 aa3.59□□□□□ -1.83
CPSF7-219ENST00000539952 Q6ZRX8 168 aa3.59□□□□□ -1.83
CPSF7-219ENST00000539952 Q8NBF4 154 aa3.59□□□□□ -1.83
CPSF7-219ENST00000539952 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
CPSF7-219ENST00000539952 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
CPSF7-219ENST00000539952 Q1T7F1 81 aa3.58□□□□□ -1.84
CPSF7-219ENST00000539952 CYP4F30PQ9H0H9 118 aa3.58□□□□□ -1.84
CPSF7-219ENST00000539952 hDV103S1A0JD37 113 aa3.57□□□□□ -1.84
CPSF7-219ENST00000539952 H0Y9J4 135 aa3.57□□□□□ -1.84
CPSF7-219ENST00000539952 MP68P56378 58 aa3.57□□□□□ -1.84
CPSF7-219ENST00000539952 DEFB105AQ8NG35 78 aa3.57□□□□□ -1.84
CPSF7-219ENST00000539952 HIGD2AQ9BW72 106 aa3.57□□□□□ -1.84
CPSF7-219ENST00000539952 A0A1W2PNM2 257 aa3.56□□□□□ -1.84
CPSF7-219ENST00000539952 KRTAP4-16G5E9R7 235 aaPredicted RBP3.56□□□□□ -1.84
CPSF7-219ENST00000539952 ZCCHC13Q8WW36 166 aaKnown RBP3.56□□□□□ -1.84
CPSF7-219ENST00000539952 IGLV8-61A0A075B6I0 122 aa3.55□□□□□ -1.84
CPSF7-219ENST00000539952 HCG22E2RYF7 251 aa3.55□□□□□ -1.84
CPSF7-219ENST00000539952 PHF5AQ7RTV0 110 aaKnown RBP3.55□□□□□ -1.84
CPSF7-219ENST00000539952 SMIM29Q86T20 159 aa3.55□□□□□ -1.84
CPSF7-219ENST00000539952 BRK1Q8WUW1 75 aa3.55□□□□□ -1.84
CPSF7-219ENST00000539952 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
CPSF7-219ENST00000539952 UBE2BP63146 152 aa3.54□□□□□ -1.84
CPSF7-219ENST00000539952 C1orf195Q5TG92 126 aa3.54□□□□□ -1.84
CPSF7-219ENST00000539952 MRPL55Q7Z7F7 128 aaKnown RBP3.54□□□□□ -1.84
CPSF7-219ENST00000539952 PRR15Q8IV56 129 aa3.54□□□□□ -1.84
CPSF7-219ENST00000539952 Q8N9L7 120 aa3.54□□□□□ -1.84
CPSF7-219ENST00000539952 SPANXA2-OT1Q8N9U9 137 aa3.54□□□□□ -1.84
CPSF7-219ENST00000539952 DSCR10P59022 87 aa3.53□□□□□ -1.84
CPSF7-219ENST00000539952 MPLKIPQ8TAP9 179 aa3.53□□□□□ -1.84
CPSF7-219ENST00000539952 Q9BRP9 147 aa3.53□□□□□ -1.84
CPSF7-219ENST00000539952 C1orf64Q8NEQ6 169 aa3.52□□□□□ -1.85
CPSF7-219ENST00000539952 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
CPSF7-219ENST00000539952 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
CPSF7-219ENST00000539952 LIMD2Q9BT23 127 aa3.51□□□□□ -1.85
CPSF7-219ENST00000539952 TRAV22A0A0B4J277 110 aa3.5□□□□□ -1.85
CPSF7-219ENST00000539952 K7EQZ3 153 aa3.5□□□□□ -1.85
CPSF7-219ENST00000539952 ZNF861PO60384 105 aa3.5□□□□□ -1.85
CPSF7-219ENST00000539952 SPRR1BP22528 89 aa3.5□□□□□ -1.85
CPSF7-219ENST00000539952 FAM229BQ4G0N7 80 aa3.5□□□□□ -1.85
CPSF7-219ENST00000539952 IGFL1Q6UW32 110 aa3.49□□□□□ -1.85
CPSF7-219ENST00000539952 TP53AIP1Q9HCN2 124 aa3.49□□□□□ -1.85
CPSF7-219ENST00000539952 UBE2AP49459 152 aa3.48□□□□□ -1.85
CPSF7-219ENST00000539952 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
CPSF7-219ENST00000539952 CASC2Q6XLA1 102 aa3.48□□□□□ -1.85
CPSF7-219ENST00000539952 KRTAP11-1Q8IUC1 163 aa3.48□□□□□ -1.85
CPSF7-219ENST00000539952 ST20-AS1Q8NBB2 130 aa3.48□□□□□ -1.85
CPSF7-219ENST00000539952 TYMSOSQ8TAI1 123 aa3.48□□□□□ -1.85
CPSF7-219ENST00000539952 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
CPSF7-219ENST00000539952 IGLV7-46A0A075B6I9 117 aa3.47□□□□□ -1.85
CPSF7-219ENST00000539952 FAM168BA1KXE4 195 aa3.47□□□□□ -1.85
CPSF7-219ENST00000539952 A8MWP4 228 aa3.47□□□□□ -1.85
CPSF7-219ENST00000539952 H0Y9P7 68 aa3.47□□□□□ -1.85
CPSF7-219ENST00000539952 PMAIP1Q13794 54 aa3.47□□□□□ -1.85
CPSF7-219ENST00000539952 LINC00208Q96KT6 92 aa3.47□□□□□ -1.85
CPSF7-219ENST00000539952 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
CPSF7-219ENST00000539952 A0A087WSZ3 146 aa3.46□□□□□ -1.86
CPSF7-219ENST00000539952 WFDC13Q8IUB5 93 aa3.45□□□□□ -1.86
CPSF7-219ENST00000539952 KRTAP7-1Q8IUC3 87 aa3.45□□□□□ -1.86
CPSF7-219ENST00000539952 LINC00472Q9H8W2 130 aa3.45□□□□□ -1.86
CPSF7-219ENST00000539952 A0A087X002 238 aa3.44□□□□□ -1.86
CPSF7-219ENST00000539952 SEC61GP60059 68 aa3.44□□□□□ -1.86
CPSF7-219ENST00000539952 RETNLBQ9BQ08 111 aa3.44□□□□□ -1.86
CPSF7-219ENST00000539952 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
CPSF7-219ENST00000539952 MOBPQ13875 183 aa3.43□□□□□ -1.86
CPSF7-219ENST00000539952 ATP11AUNQ6ZP68 121 aa3.43□□□□□ -1.86
CPSF7-219ENST00000539952 Q8N9P0 234 aaPredicted RBP3.43□□□□□ -1.86
CPSF7-219ENST00000539952 LINC00304Q8N9R0 145 aa3.43□□□□□ -1.86
CPSF7-219ENST00000539952 LOC101927531A0A1B0GV80 90 aa3.42□□□□□ -1.86
CPSF7-219ENST00000539952 NDUFS5O43920 106 aa3.42□□□□□ -1.86
CPSF7-219ENST00000539952 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
CPSF7-219ENST00000539952 ZNF706Q9Y5V0 76 aaPredicted RBP3.42□□□□□ -1.86
CPSF7-219ENST00000539952 A8MUN3 132 aa3.41□□□□□ -1.86
CPSF7-219ENST00000539952 PSPHP1O15172 72 aa3.41□□□□□ -1.86
CPSF7-219ENST00000539952 SEC61BP60468 96 aaKnown RBP3.41□□□□□ -1.86
CPSF7-219ENST00000539952 SPAG11AQ6PDA7 123 aa3.41□□□□□ -1.86
CPSF7-219ENST00000539952 Q75L30 129 aa3.41□□□□□ -1.86
CPSF7-219ENST00000539952 CHKB-CPT1BH3BT56 60 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms