RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 LCE2CQ5TA81 110 aa4.59□□□□□ -1.67
GNE-205ENST00000539815 CSAG1Q6PB30 78 aa4.59□□□□□ -1.67
GNE-205ENST00000539815 LCE2AQ5TA79 106 aaPredicted RBP4.59□□□□□ -1.67
GNE-205ENST00000539815 SMIM29Q86T20 159 aa4.59□□□□□ -1.67
GNE-205ENST00000539815 COX7B2Q8TF08 81 aa4.59□□□□□ -1.67
GNE-205ENST00000539815 C6orf48Q9UBA6 75 aa4.59□□□□□ -1.67
GNE-205ENST00000539815 KMT2AQ03164 3969 aa4.59□□□□□ -1.67
GNE-205ENST00000539815 VPS13DQ5THJ4 4388 aa4.59□□□□□ -1.68
GNE-205ENST00000539815 ZCCHC13Q8WW36 166 aaKnown RBP4.58□□□□□ -1.68
GNE-205ENST00000539815 IGLV9-49A0A0B4J1Y8 123 aa4.58□□□□□ -1.68
GNE-205ENST00000539815 PRLHP81277 87 aa4.58□□□□□ -1.68
GNE-205ENST00000539815 CSMD3Q7Z407 3707 aa4.58□□□□□ -1.68
GNE-205ENST00000539815 DNAH7Q8WXX0 4024 aa4.58□□□□□ -1.68
GNE-205ENST00000539815 LCE2BO14633 110 aa4.58□□□□□ -1.68
GNE-205ENST00000539815 KRTAP26-1Q6PEX3 210 aa4.58□□□□□ -1.68
GNE-205ENST00000539815 LINC00208Q96KT6 92 aa4.58□□□□□ -1.68
GNE-205ENST00000539815 ST20-AS1Q8NBB2 130 aa4.57□□□□□ -1.68
GNE-205ENST00000539815 LINC00167Q96N53 147 aa4.57□□□□□ -1.68
GNE-205ENST00000539815 FAT1Q14517 4588 aa4.57□□□□□ -1.68
GNE-205ENST00000539815 Q8IZM0 81 aa4.56□□□□□ -1.68
GNE-205ENST00000539815 ANAPC11Q9NYG5 84 aa4.56□□□□□ -1.68
GNE-205ENST00000539815 LOC110117498A0A087WWA1 95 aa4.56□□□□□ -1.68
GNE-205ENST00000539815 HERC1Q15751 4861 aa4.56□□□□□ -1.68
GNE-205ENST00000539815 IGHV3OR16-9A0A0B4J2B5 98 aa4.55□□□□□ -1.68
GNE-205ENST00000539815 IGLV5-39A0A0G2JS06 123 aa4.55□□□□□ -1.68
GNE-205ENST00000539815 A0A1W2PNM2 257 aa4.55□□□□□ -1.68
GNE-205ENST00000539815 SMIM1B2RUZ4 78 aa4.55□□□□□ -1.68
GNE-205ENST00000539815 TLX1NBP0CAT3 122 aa4.54□□□□□ -1.68
GNE-205ENST00000539815 KRTAP10-4P60372 401 aaPredicted RBP4.53□□□□□ -1.68
GNE-205ENST00000539815 ROMO1P60602 79 aa4.53□□□□□ -1.68
GNE-205ENST00000539815 APOBP04114 4563 aaKnown RBP4.52□□□□□ -1.69
GNE-205ENST00000539815 IGLV5-45A0A087WSX0 123 aa4.52□□□□□ -1.69
GNE-205ENST00000539815 PDE6GP18545 87 aa4.51□□□□□ -1.69
GNE-205ENST00000539815 SPINK1P00995 79 aa4.5□□□□□ -1.69
GNE-205ENST00000539815 LYSTQ99698 3801 aa4.5□□□□□ -1.69
GNE-205ENST00000539815 HSPG2P98160 4391 aa4.5□□□□□ -1.69
GNE-205ENST00000539815 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
GNE-205ENST00000539815 IGLV8-61A0A075B6I0 122 aa4.49□□□□□ -1.69
GNE-205ENST00000539815 P0C880 135 aa4.49□□□□□ -1.69
GNE-205ENST00000539815 Q8NBF4 154 aa4.48□□□□□ -1.69
GNE-205ENST00000539815 Q9BRP9 147 aa4.48□□□□□ -1.69
GNE-205ENST00000539815 DNAH17Q9UFH2 4485 aa4.48□□□□□ -1.69
GNE-205ENST00000539815 COA5Q86WW8 74 aa4.48□□□□□ -1.69
GNE-205ENST00000539815 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
GNE-205ENST00000539815 ELOF1P60002 83 aaKnown RBP4.47□□□□□ -1.69
GNE-205ENST00000539815 Q6ZQY7 126 aa4.47□□□□□ -1.69
GNE-205ENST00000539815 NDUFB1O75438 58 aa4.47□□□□□ -1.69
GNE-205ENST00000539815 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
GNE-205ENST00000539815 DEFB116Q30KQ4 102 aa4.46□□□□□ -1.7
GNE-205ENST00000539815 SSBP3-AS1Q7Z2R9 100 aa4.46□□□□□ -1.7
GNE-205ENST00000539815 PKHD1P08F94 4074 aa4.46□□□□□ -1.7
GNE-205ENST00000539815 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
GNE-205ENST00000539815 MIR22HGQ0VDD5 57 aa4.45□□□□□ -1.7
GNE-205ENST00000539815 DEFB105AQ8NG35 78 aa4.45□□□□□ -1.7
GNE-205ENST00000539815 KRTAP9-6A0A140TA67 174 aa4.45□□□□□ -1.7
GNE-205ENST00000539815 LINC00575Q6W349 94 aa4.45□□□□□ -1.7
GNE-205ENST00000539815 TPRXLQ17RH7 258 aa4.45□□□□□ -1.7
GNE-205ENST00000539815 A0A087X002 238 aa4.44□□□□□ -1.7
GNE-205ENST00000539815 MYCBP2O75592 4640 aa4.43□□□□□ -1.7
GNE-205ENST00000539815 COX17Q14061 63 aa4.43□□□□□ -1.7
GNE-205ENST00000539815 C9orf92A6NGG3 77 aa4.43□□□□□ -1.7
GNE-205ENST00000539815 FRAS1Q86XX4 4008 aa4.42□□□□□ -1.7
GNE-205ENST00000539815 KRTAP16-1A8MUX0 517 aa4.41□□□□□ -1.7
GNE-205ENST00000539815 COX7BP24311 80 aa4.41□□□□□ -1.7
GNE-205ENST00000539815 ASB16-AS1Q495Z4 193 aa4.41□□□□□ -1.7
GNE-205ENST00000539815 SPANXA2-OT1Q8N9U9 137 aa4.4□□□□□ -1.71
GNE-205ENST00000539815 SPRR4Q96PI1 79 aa4.4□□□□□ -1.71
GNE-205ENST00000539815 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
GNE-205ENST00000539815 K7EQZ3 153 aa4.39□□□□□ -1.71
GNE-205ENST00000539815 KRTAP1-4P0C5Y4 121 aa4.39□□□□□ -1.71
GNE-205ENST00000539815 H0Y9P7 68 aa4.38□□□□□ -1.71
GNE-205ENST00000539815 Q8NDZ9 215 aa4.38□□□□□ -1.71
GNE-205ENST00000539815 IGLV6-57P01721 117 aa4.38□□□□□ -1.71
GNE-205ENST00000539815 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
GNE-205ENST00000539815 DNAH6Q9C0G6 4158 aa4.37□□□□□ -1.71
GNE-205ENST00000539815 DNAH2Q9P225 4427 aa4.37□□□□□ -1.71
GNE-205ENST00000539815 WFDC13Q8IUB5 93 aa4.36□□□□□ -1.71
GNE-205ENST00000539815 PCOTHQ58A44 107 aa4.36□□□□□ -1.71
GNE-205ENST00000539815 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
GNE-205ENST00000539815 DHRS4-AS1Q9P1J3 65 aa4.35□□□□□ -1.71
GNE-205ENST00000539815 LRP2P98164 4655 aa4.34□□□□□ -1.71
GNE-205ENST00000539815 KRTAP11-1Q8IUC1 163 aa4.34□□□□□ -1.71
GNE-205ENST00000539815 A8MWP4 228 aa4.34□□□□□ -1.71
GNE-205ENST00000539815 DSCR10P59022 87 aa4.34□□□□□ -1.71
GNE-205ENST00000539815 LORP23490 312 aaPredicted RBP4.33□□□□□ -1.72
GNE-205ENST00000539815 IGLV5-37A0A075B6J1 123 aa4.32□□□□□ -1.72
GNE-205ENST00000539815 KRTAP13-2Q52LG2 175 aa4.32□□□□□ -1.72
GNE-205ENST00000539815 LINC00483Q53H64 154 aa4.31□□□□□ -1.72
GNE-205ENST00000539815 VPS13BQ7Z7G8 4022 aa4.31□□□□□ -1.72
GNE-205ENST00000539815 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
GNE-205ENST00000539815 LRP1Q07954 4544 aaKnown RBP4.29□□□□□ -1.72
GNE-205ENST00000539815 HRES1P13985 223 aa4.28□□□□□ -1.72
GNE-205ENST00000539815 NOTCH2NLQ7Z3S9 236 aa4.28□□□□□ -1.72
GNE-205ENST00000539815 A8MUU9 505 aa4.28□□□□□ -1.72
GNE-205ENST00000539815 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
GNE-205ENST00000539815 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
GNE-205ENST00000539815 RNF213Q63HN8 5207 aa4.28□□□□□ -1.72
GNE-205ENST00000539815 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
GNE-205ENST00000539815 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
GNE-205ENST00000539815 Q6ZRX8 168 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms