RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 NXT2Q9NPJ8 142 aaKnown RBP0.22□□□□□ -2.37
HIF1A-204ENST00000539097 C3orf79P0CE67 100 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 SPRR2EP22531 72 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 S100A3P33764 101 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 SPRR2BP35325 72 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 SPRR2AP35326 72 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 EDDM3BP56851 147 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 NBASA2RRP1 2371 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 IFI6P09912 130 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 PIPP12273 146 aaPredicted RBP0.21□□□□□ -2.38
HIF1A-204ENST00000539097 PLAC4Q8WY50 150 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 AKAP6Q13023 2319 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 MYMXA0A1B0GTQ4 84 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 IGIPA6NJ69 53 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 COX6CP09669 75 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 COX6B1P14854 86 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 DYNLRB1Q9NP97 96 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 AP4S1Q9Y587 144 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 A0A087WVE0 104 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 TRGV1A0A0A0MS02 117 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 FXYD4P59646 89 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 RPL37AP61513 92 aaKnown RBP0.21□□□□□ -2.38
HIF1A-204ENST00000539097 S100A7L2Q5SY68 101 aa0.21□□□□□ -2.38
HIF1A-204ENST00000539097 TMEM263Q8WUH6 116 aaKnown RBP0.21□□□□□ -2.38
HIF1A-204ENST00000539097 CSPG4Q6UVK1 2322 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 H0YAA0 97 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 SFTA3P0C7M3 94 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 KRTAP19-3Q7Z4W3 81 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 CHKB-CPT1BH3BT56 60 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 PPYP01298 95 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 KRTDAPP60985 99 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 Q6ZRX8 168 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 S100ZQ8WXG8 99 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 CNFNQ9BYD5 112 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 GCHFRP30047 84 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 PMCHL1Q16048 86 aa0.2□□□□□ -2.38
HIF1A-204ENST00000539097 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.19□□□□□ -2.388e-7■■■■□ 25
HIF1A-204ENST00000539097 A0A0D9SG42 100 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 UQCR11O14957 56 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 SMIM13P0DJ93 91 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 GNG11P61952 73 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 C10orf113Q5VZT2 155 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 CRYM-AS1A6NIL9 109 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 F8VRH5 84 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 FAUP35544 74 aaKnown RBP0.19□□□□□ -2.38
HIF1A-204ENST00000539097 SPTSSBQ8NFR3 76 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 CCL19Q99731 98 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 FAM103A1Q9BTL3 118 aaKnown RBP0.19□□□□□ -2.38
HIF1A-204ENST00000539097 KCNQ1DNQ9H478 68 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 GOLGA4Q13439 2230 aaKnown RBP0.19□□□□□ -2.38
HIF1A-204ENST00000539097 DEFA5Q01523 94 aa0.19□□□□□ -2.38
HIF1A-204ENST00000539097 FXYD1O00168 92 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 PLGLAQ15195 96 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 KRTAP19-2Q3LHN2 52 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 Q6ZQY7 126 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 TRBV30A0A0K0K1B3 111 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 PPP1R17O96001 155 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 ADIRFQ15847 76 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 C10orf128Q5T292 105 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 Q5VSD8 79 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 MANBALQ9NQG1 85 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 ARL2-SNX15V9GYD0 113 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 TRAV21A0A0B4J279 112 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 H0Y9P7 68 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 SPAG11BQ08648 103 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 ATP5EP2Q5VTU8 51 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 SPAG11AQ6PDA7 123 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 SMIM11BQ8TCY0 68 aa0.18□□□□□ -2.38
HIF1A-204ENST00000539097 KANTRA0A1W2PQU2 76 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 UMAD1C9J7I0 102 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 MT4P47944 62 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 FDCSPQ8NFU4 85 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 SMR3AQ99954 134 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 PRR15LQ9BU68 103 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 CEBPZOSA8MTT3 80 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 K7EQZ3 153 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 IFI27P40305 119 aaPredicted RBP0.17□□□□□ -2.38
HIF1A-204ENST00000539097 COX6A2Q02221 97 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 BAGE3Q86Y29 109 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 LYNX1G3V0Z9 82 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 HILPDAQ9Y5L2 63 aa0.17□□□□□ -2.38
HIF1A-204ENST00000539097 NCR3O14931 201 aa0.16□□□□□ -2.38
HIF1A-204ENST00000539097 RPL7L1Q6DKI1 246 aaKnown RBP0.16□□□□□ -2.38
HIF1A-204ENST00000539097 SMIM4Q8WVI0 70 aa0.16□□□□□ -2.38
HIF1A-204ENST00000539097 Q9H521 79 aa0.16□□□□□ -2.38
HIF1A-204ENST00000539097 WNK2Q9Y3S1 2297 aa0.16□□□□□ -2.38
HIF1A-204ENST00000539097 URB1O60287 2271 aaKnown RBP0.16□□□□□ -2.38
HIF1A-204ENST00000539097 K7EMI3 77 aa0.16□□□□□ -2.38
HIF1A-204ENST00000539097 TRAV1-2A0A0B4J238 106 aa0.16□□□□□ -2.38
HIF1A-204ENST00000539097 PSMG4Q5JS54 123 aa0.16□□□□□ -2.38
HIF1A-204ENST00000539097 NCBP2-AS2Q69YL0 99 aa0.16□□□□□ -2.38
HIF1A-204ENST00000539097 TRBV6-1A0A0K0K1D8 114 aa0.15□□□□□ -2.38
HIF1A-204ENST00000539097 M0R3E3 92 aa0.15□□□□□ -2.38
HIF1A-204ENST00000539097 DEFB114Q30KQ6 69 aa0.15□□□□□ -2.38
HIF1A-204ENST00000539097 USF3Q68DE3 2245 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 A6NIN4 97 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 CPSF4LA6NMK7 179 aaKnown RBP0.15□□□□□ -2.39
HIF1A-204ENST00000539097 ZNF815PA8K554 130 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 CRIP1P50238 77 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms