RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 NOTCH2NLQ7Z3S9 236 aa11.1□□□□□ -0.63
SFSWAP-207ENST00000538548 PLECQ15149 4684 aaKnown RBP11.09□□□□□ -0.63
SFSWAP-207ENST00000538548 PANO1I0J062 215 aa11.08□□□□□ -0.64
SFSWAP-207ENST00000538548 ACYP2P14621 99 aa11.06□□□□□ -0.64
SFSWAP-207ENST00000538548 UBE2DNLQ8IWF7 75 aa11.06□□□□□ -0.64
SFSWAP-207ENST00000538548 KRTAP13-3Q3SY46 172 aa11.05□□□□□ -0.64
SFSWAP-207ENST00000538548 WWC2-AS2Q96NR7 200 aa11.05□□□□□ -0.64
SFSWAP-207ENST00000538548 ZNF706Q9Y5V0 76 aaPredicted RBP11.05□□□□□ -0.64
SFSWAP-207ENST00000538548 LINC00313P59037 77 aa11.05□□□□□ -0.64
SFSWAP-207ENST00000538548 STARD9Q9P2P6 4700 aa11.04□□□□□ -0.64
SFSWAP-207ENST00000538548 Q5W150 140 aa11.04□□□□□ -0.64
SFSWAP-207ENST00000538548 FBN3Q75N90 2809 aa11.03□□□□□ -0.64
SFSWAP-207ENST00000538548 ALMS1Q8TCU4 4167 aa11.02□□□□□ -0.65
SFSWAP-207ENST00000538548 SPACA4Q8TDM5 124 aa10.98□□□□□ -0.65
SFSWAP-207ENST00000538548 DMAC1Q96GE9 116 aa10.97□□□□□ -0.65
SFSWAP-207ENST00000538548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.96□□□□□ -0.65
SFSWAP-207ENST00000538548 C8orf87E5RJ46 101 aa10.96□□□□□ -0.66
SFSWAP-207ENST00000538548 PLA2G1BP04054 148 aaKnown RBP10.95□□□□□ -0.66
SFSWAP-207ENST00000538548 PRAC1Q96KF2 57 aa10.95□□□□□ -0.66
SFSWAP-207ENST00000538548 APLNQ9ULZ1 77 aa10.95□□□□□ -0.66
SFSWAP-207ENST00000538548 SPINK6Q6UWN8 80 aa10.92□□□□□ -0.66
SFSWAP-207ENST00000538548 ANAPC11Q9NYG5 84 aa10.92□□□□□ -0.66
SFSWAP-207ENST00000538548 A0A1B0GU69 56 aa10.92□□□□□ -0.66
SFSWAP-207ENST00000538548 SPATA8Q6RVD6 105 aa10.9□□□□□ -0.66
SFSWAP-207ENST00000538548 KMT2AQ03164 3969 aa10.9□□□□□ -0.67
SFSWAP-207ENST00000538548 PSORS1C2Q9UIG4 136 aa10.89□□□□□ -0.67
SFSWAP-207ENST00000538548 IGLV5-52A0A0A0MRZ9 124 aa10.88□□□□□ -0.67
SFSWAP-207ENST00000538548 Q6ZRN7 208 aaPredicted RBP10.88□□□□□ -0.67
SFSWAP-207ENST00000538548 ADM2Q7Z4H4 148 aa10.88□□□□□ -0.67
SFSWAP-207ENST00000538548 NBDYA0A0U1RRE5 68 aa10.88□□□□□ -0.67
SFSWAP-207ENST00000538548 ZNF861PO60384 105 aa10.87□□□□□ -0.67
SFSWAP-207ENST00000538548 DNAH8Q96JB1 4490 aa10.86□□□□□ -0.67
SFSWAP-207ENST00000538548 RTL8CO15255 209 aa10.85□□□□□ -0.67
SFSWAP-207ENST00000538548 DYNC2H1Q8NCM8 4307 aaKnown RBP10.85□□□□□ -0.67
SFSWAP-207ENST00000538548 LINC01554Q52M75 96 aa10.82□□□□□ -0.68
SFSWAP-207ENST00000538548 FAM229AH3BQW9 127 aa10.81□□□□□ -0.68
SFSWAP-207ENST00000538548 UQCR11O14957 56 aa10.8□□□□□ -0.68
SFSWAP-207ENST00000538548 MIR22HGQ0VDD5 57 aa10.8□□□□□ -0.68
SFSWAP-207ENST00000538548 FRAS1Q86XX4 4008 aa10.8□□□□□ -0.68
SFSWAP-207ENST00000538548 IGKV2-30P06310 120 aa10.77□□□□□ -0.69
SFSWAP-207ENST00000538548 CIRBP-AS1Q8TBR5 109 aa10.77□□□□□ -0.69
SFSWAP-207ENST00000538548 A0A087WTM6 91 aa10.72□□□□□ -0.69
SFSWAP-207ENST00000538548 VPS13DQ5THJ4 4388 aa10.72□□□□□ -0.69
SFSWAP-207ENST00000538548 DNAH2Q9P225 4427 aa10.72□□□□□ -0.69
SFSWAP-207ENST00000538548 C4orf48Q5BLP8 95 aa10.71□□□□□ -0.7
SFSWAP-207ENST00000538548 RETNLBQ9BQ08 111 aa10.71□□□□□ -0.7
SFSWAP-207ENST00000538548 HECTD4Q9Y4D8 3996 aa10.7□□□□□ -0.7
SFSWAP-207ENST00000538548 SSBP3-AS1Q7Z2R9 100 aa10.69□□□□□ -0.7
SFSWAP-207ENST00000538548 IGLV7-43P04211 117 aa10.66□□□□□ -0.7
SFSWAP-207ENST00000538548 NUPR2A6NF83 97 aa10.66□□□□□ -0.7
SFSWAP-207ENST00000538548 DNAH17Q9UFH2 4485 aa10.6□□□□□ -0.71
SFSWAP-207ENST00000538548 HYDINQ4G0P3 5121 aa10.59□□□□□ -0.71
SFSWAP-207ENST00000538548 CSAG1Q6PB30 78 aa10.59□□□□□ -0.71
SFSWAP-207ENST00000538548 KRTAP16-1A8MUX0 517 aa10.58□□□□□ -0.72
SFSWAP-207ENST00000538548 IGKV2D-30A0A075B6S6 120 aa10.56□□□□□ -0.72
SFSWAP-207ENST00000538548 LY6G6CO95867 125 aa10.54□□□□□ -0.72
SFSWAP-207ENST00000538548 DNAH6Q9C0G6 4158 aa10.52□□□□□ -0.72
SFSWAP-207ENST00000538548 H3BS24 57 aa10.45□□□□□ -0.74
SFSWAP-207ENST00000538548 KRTAP13-2Q52LG2 175 aa10.45□□□□□ -0.74
SFSWAP-207ENST00000538548 SPINK1P00995 79 aa10.41□□□□□ -0.74
SFSWAP-207ENST00000538548 DNAH11Q96DT5 4516 aa10.41□□□□□ -0.74
SFSWAP-207ENST00000538548 KRTAP21-3Q3LHN1 58 aa10.38□□□□□ -0.75
SFSWAP-207ENST00000538548 DNAH5Q8TE73 4624 aa10.36□□□□□ -0.75
SFSWAP-207ENST00000538548 A8MUU9 505 aa10.34□□□□□ -0.75
SFSWAP-207ENST00000538548 Q8N1X5 172 aa10.34□□□□□ -0.75
SFSWAP-207ENST00000538548 C1orf134Q5TEV5 83 aa10.34□□□□□ -0.75
SFSWAP-207ENST00000538548 Q6ZSA8 131 aa10.32□□□□□ -0.76
SFSWAP-207ENST00000538548 H0YAA0 97 aa10.32□□□□□ -0.76
SFSWAP-207ENST00000538548 SACSQ9NZJ4 4579 aa10.31□□□□□ -0.76
SFSWAP-207ENST00000538548 PKHD1P08F94 4074 aa10.31□□□□□ -0.76
SFSWAP-207ENST00000538548 FAT2Q9NYQ8 4349 aa10.31□□□□□ -0.76
SFSWAP-207ENST00000538548 KMT2CQ8NEZ4 4911 aaKnown RBP10.27□□□□□ -0.76
SFSWAP-207ENST00000538548 KRTAP25-1Q3LHN0 102 aa10.27□□□□□ -0.77
SFSWAP-207ENST00000538548 KRTAP10-2P60368 255 aa10.26□□□□□ -0.77
SFSWAP-207ENST00000538548 PKD1P98161 4303 aa10.25□□□□□ -0.77
SFSWAP-207ENST00000538548 LINC00304Q8N9R0 145 aa10.25□□□□□ -0.77
SFSWAP-207ENST00000538548 KRTAP1-4P0C5Y4 121 aa10.24□□□□□ -0.77
SFSWAP-207ENST00000538548 TYMSOSQ8TAI1 123 aa10.21□□□□□ -0.78
SFSWAP-207ENST00000538548 LRP1BQ9NZR2 4599 aa10.2□□□□□ -0.78
SFSWAP-207ENST00000538548 A0A1B0GU33 70 aa10.2□□□□□ -0.78
SFSWAP-207ENST00000538548 ROMO1P60602 79 aa10.15□□□□□ -0.79
SFSWAP-207ENST00000538548 H1FX-AS1Q4G0G2 97 aa10.14□□□□□ -0.79
SFSWAP-207ENST00000538548 KRTAP10-1P60331 282 aa10.08□□□□□ -0.8
SFSWAP-207ENST00000538548 VPS13BQ7Z7G8 4022 aa10.07□□□□□ -0.8
SFSWAP-207ENST00000538548 KRTAP3-1Q9BYR8 98 aa10.05□□□□□ -0.8
SFSWAP-207ENST00000538548 RYR2Q92736 4967 aa10.05□□□□□ -0.8
SFSWAP-207ENST00000538548 K7ERS5 55 aa10.02□□□□□ -0.81
SFSWAP-207ENST00000538548 RPS29P62273 56 aaKnown RBP10.02□□□□□ -0.81
SFSWAP-207ENST00000538548 DYNC1H1Q14204 4646 aaKnown RBP10.01□□□□□ -0.81
SFSWAP-207ENST00000538548 FLG2Q5D862 2391 aaPredicted RBP9.98□□□□□ -0.81
SFSWAP-207ENST00000538548 FAT1Q14517 4588 aa9.98□□□□□ -0.81
SFSWAP-207ENST00000538548 C20orf166-AS1Q96NR2 134 aa9.98□□□□□ -0.81
SFSWAP-207ENST00000538548 RYR3Q15413 4870 aa9.98□□□□□ -0.81
SFSWAP-207ENST00000538548 COX6B2Q6YFQ2 88 aa9.93□□□□□ -0.82
SFSWAP-207ENST00000538548 CRIPTQ9P021 101 aa9.92□□□□□ -0.82
SFSWAP-207ENST00000538548 C9orf92A6NGG3 77 aa9.89□□□□□ -0.83
SFSWAP-207ENST00000538548 SMR3BP02814 79 aaPredicted RBP9.88□□□□□ -0.83
SFSWAP-207ENST00000538548 P0C880 135 aa9.83□□□□□ -0.84
SFSWAP-207ENST00000538548 APOBP04114 4563 aaKnown RBP9.83□□□□□ -0.84
SFSWAP-207ENST00000538548 RPL37P61927 97 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms