RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 Q8N3U1 123 aa4.25□□□□□ -1.73
PTPRB-203ENST00000538174 P0C880 135 aa4.24□□□□□ -1.73
PTPRB-203ENST00000538174 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
PTPRB-203ENST00000538174 SPRR1BP22528 89 aa4.24□□□□□ -1.73
PTPRB-203ENST00000538174 CSAG1Q6PB30 78 aa4.24□□□□□ -1.73
PTPRB-203ENST00000538174 OCR1Q9BZK8 76 aa4.24□□□□□ -1.73
PTPRB-203ENST00000538174 HTN3P15516 51 aa4.23□□□□□ -1.73
PTPRB-203ENST00000538174 C7orf33Q8WU49 177 aa4.23□□□□□ -1.73
PTPRB-203ENST00000538174 K7ERS5 55 aa4.22□□□□□ -1.73
PTPRB-203ENST00000538174 RPL37AP61513 92 aaKnown RBP4.22□□□□□ -1.73
PTPRB-203ENST00000538174 Q8N377 158 aa4.21□□□□□ -1.73
PTPRB-203ENST00000538174 IGKV2D-24A0A075B6R9 120 aa4.21□□□□□ -1.74
PTPRB-203ENST00000538174 Q8NBF4 154 aa4.21□□□□□ -1.74
PTPRB-203ENST00000538174 NBDYA0A0U1RRE5 68 aa4.19□□□□□ -1.74
PTPRB-203ENST00000538174 ETDCA0A1B0GVM5 59 aa4.19□□□□□ -1.74
PTPRB-203ENST00000538174 A0A1W2PNM2 257 aa4.19□□□□□ -1.74
PTPRB-203ENST00000538174 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.19□□□□□ -1.74
PTPRB-203ENST00000538174 APOBP04114 4563 aaKnown RBP4.19□□□□□ -1.74
PTPRB-203ENST00000538174 Q5VSD8 79 aa4.18□□□□□ -1.74
PTPRB-203ENST00000538174 IGKV4-1P06312 121 aa4.18□□□□□ -1.74
PTPRB-203ENST00000538174 CIRBP-AS1Q8TBR5 109 aa4.18□□□□□ -1.74
PTPRB-203ENST00000538174 H3BPC8 53 aa4.18□□□□□ -1.74
PTPRB-203ENST00000538174 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
PTPRB-203ENST00000538174 BPY2O14599 106 aa4.17□□□□□ -1.74
PTPRB-203ENST00000538174 HAMPP81172 84 aa4.17□□□□□ -1.74
PTPRB-203ENST00000538174 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
PTPRB-203ENST00000538174 Q9BRP9 147 aa4.17□□□□□ -1.74
PTPRB-203ENST00000538174 KRTAP7-1Q8IUC3 87 aa4.16□□□□□ -1.74
PTPRB-203ENST00000538174 UBE2DNLQ8IWF7 75 aa4.16□□□□□ -1.74
PTPRB-203ENST00000538174 HIGD2AQ9BW72 106 aa4.16□□□□□ -1.74
PTPRB-203ENST00000538174 SMIM29Q86T20 159 aa4.16□□□□□ -1.74
PTPRB-203ENST00000538174 C1orf137Q5JT78 98 aa4.15□□□□□ -1.74
PTPRB-203ENST00000538174 M0R2N4 97 aa4.15□□□□□ -1.75
PTPRB-203ENST00000538174 PKHD1L1Q86WI1 4243 aa4.14□□□□□ -1.75
PTPRB-203ENST00000538174 C9orf163Q8N9P6 203 aa4.14□□□□□ -1.75
PTPRB-203ENST00000538174 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
PTPRB-203ENST00000538174 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
PTPRB-203ENST00000538174 SPAG11AQ6PDA7 123 aa4.12□□□□□ -1.75
PTPRB-203ENST00000538174 ZCCHC13Q8WW36 166 aaKnown RBP4.12□□□□□ -1.75
PTPRB-203ENST00000538174 A0A1B0GVX0 72 aa4.12□□□□□ -1.75
PTPRB-203ENST00000538174 NDUFB1O75438 58 aa4.12□□□□□ -1.75
PTPRB-203ENST00000538174 KRTAP13-1Q8IUC0 172 aa4.11□□□□□ -1.75
PTPRB-203ENST00000538174 A8MUU9 505 aa4.11□□□□□ -1.75
PTPRB-203ENST00000538174 SPINK7P58062 85 aa4.11□□□□□ -1.75
PTPRB-203ENST00000538174 MYCBP2O75592 4640 aa4.1□□□□□ -1.75
PTPRB-203ENST00000538174 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
PTPRB-203ENST00000538174 DSCR10P59022 87 aa4.1□□□□□ -1.75
PTPRB-203ENST00000538174 Q6ZRN7 208 aaPredicted RBP4.1□□□□□ -1.75
PTPRB-203ENST00000538174 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
PTPRB-203ENST00000538174 SPANXA2-OT1Q8N9U9 137 aa4.09□□□□□ -1.75
PTPRB-203ENST00000538174 PLAC8Q9NZF1 115 aa4.09□□□□□ -1.75
PTPRB-203ENST00000538174 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
PTPRB-203ENST00000538174 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
PTPRB-203ENST00000538174 A0A096LNI7 61 aa4.08□□□□□ -1.76
PTPRB-203ENST00000538174 IGFL1Q6UW32 110 aa4.08□□□□□ -1.76
PTPRB-203ENST00000538174 Q6ZSA8 131 aa4.08□□□□□ -1.76
PTPRB-203ENST00000538174 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.07□□□□□ -1.76
PTPRB-203ENST00000538174 A0A087WSZ3 146 aa4.07□□□□□ -1.76
PTPRB-203ENST00000538174 FAM168BA1KXE4 195 aa4.07□□□□□ -1.76
PTPRB-203ENST00000538174 LINC00472Q9H8W2 130 aa4.07□□□□□ -1.76
PTPRB-203ENST00000538174 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
PTPRB-203ENST00000538174 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
PTPRB-203ENST00000538174 A0A1W2PNN7 141 aa4.06□□□□□ -1.76
PTPRB-203ENST00000538174 TP53AIP1Q9HCN2 124 aa4.06□□□□□ -1.76
PTPRB-203ENST00000538174 KRTAP10-2P60368 255 aa4.05□□□□□ -1.76
PTPRB-203ENST00000538174 ST20-AS1Q8NBB2 130 aa4.05□□□□□ -1.76
PTPRB-203ENST00000538174 SPACA4Q8TDM5 124 aa4.05□□□□□ -1.76
PTPRB-203ENST00000538174 HERC1Q15751 4861 aa4.05□□□□□ -1.76
PTPRB-203ENST00000538174 DMBT1Q9UGM3 2413 aaPredicted RBP4.05□□□□□ -1.76
PTPRB-203ENST00000538174 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
PTPRB-203ENST00000538174 KRTAP1-5Q9BYS1 174 aa4.05□□□□□ -1.76
PTPRB-203ENST00000538174 DNAH5Q8TE73 4624 aa4.05□□□□□ -1.76
PTPRB-203ENST00000538174 DNAH8Q96JB1 4490 aa4.04□□□□□ -1.76
PTPRB-203ENST00000538174 DEFB105AQ8NG35 78 aa4.04□□□□□ -1.76
PTPRB-203ENST00000538174 KRTAP10-4P60372 401 aaPredicted RBP4.03□□□□□ -1.76
PTPRB-203ENST00000538174 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.76
PTPRB-203ENST00000538174 A0A087WTM6 91 aa4.02□□□□□ -1.77
PTPRB-203ENST00000538174 KRTAP10-1P60331 282 aa4.01□□□□□ -1.77
PTPRB-203ENST00000538174 K7EQZ3 153 aa4.01□□□□□ -1.77
PTPRB-203ENST00000538174 H0Y9P7 68 aa3.99□□□□□ -1.77
PTPRB-203ENST00000538174 PANO1I0J062 215 aa3.99□□□□□ -1.77
PTPRB-203ENST00000538174 Q8N9L7 120 aa3.99□□□□□ -1.77
PTPRB-203ENST00000538174 FAT1Q14517 4588 aa3.98□□□□□ -1.77
PTPRB-203ENST00000538174 SSBP3-AS1Q7Z2R9 100 aa3.98□□□□□ -1.77
PTPRB-203ENST00000538174 ZNF861PO60384 105 aa3.98□□□□□ -1.77
PTPRB-203ENST00000538174 PRLHP81277 87 aa3.98□□□□□ -1.77
PTPRB-203ENST00000538174 Q96NJ1 140 aa3.97□□□□□ -1.77
PTPRB-203ENST00000538174 MMP24-AS1A0A0U1RRL7 71 aa3.96□□□□□ -1.78
PTPRB-203ENST00000538174 DMAC1Q96GE9 116 aa3.96□□□□□ -1.78
PTPRB-203ENST00000538174 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
PTPRB-203ENST00000538174 IGLV7-46A0A075B6I9 117 aa3.95□□□□□ -1.78
PTPRB-203ENST00000538174 IGKV2-24A0A0C4DH68 120 aa3.95□□□□□ -1.78
PTPRB-203ENST00000538174 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
PTPRB-203ENST00000538174 COA5Q86WW8 74 aa3.95□□□□□ -1.78
PTPRB-203ENST00000538174 KRTAP11-1Q8IUC1 163 aa3.95□□□□□ -1.78
PTPRB-203ENST00000538174 KRTAP3-3Q9BYR6 98 aa3.95□□□□□ -1.78
PTPRB-203ENST00000538174 KRTAP3-2Q9BYR7 98 aa3.95□□□□□ -1.78
PTPRB-203ENST00000538174 SPATA8Q6RVD6 105 aa3.94□□□□□ -1.78
PTPRB-203ENST00000538174 UBR4Q5T4S7 5183 aa3.93□□□□□ -1.78
PTPRB-203ENST00000538174 TNXBP22105 4242 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms