RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
UBE3B-208ENST00000538070 TRAV22A0A0B4J277 110 aa5.18□□□□□ -1.58
UBE3B-208ENST00000538070 SMR3BP02814 79 aaPredicted RBP5.18□□□□□ -1.58
UBE3B-208ENST00000538070 DNAH17Q9UFH2 4485 aa5.17□□□□□ -1.58
UBE3B-208ENST00000538070 Q96NJ1 140 aa5.16□□□□□ -1.58
UBE3B-208ENST00000538070 DNAH8Q96JB1 4490 aa5.16□□□□□ -1.58
UBE3B-208ENST00000538070 A0A1B0GVX0 72 aa5.16□□□□□ -1.58
UBE3B-208ENST00000538070 ZCCHC13Q8WW36 166 aaKnown RBP5.15□□□□□ -1.59
UBE3B-208ENST00000538070 LINC00483Q53H64 154 aa5.15□□□□□ -1.59
UBE3B-208ENST00000538070 PRR26Q8N8Z3 221 aa5.13□□□□□ -1.59
UBE3B-208ENST00000538070 MRPL34Q9BQ48 92 aaKnown RBP5.12□□□□□ -1.59
UBE3B-208ENST00000538070 LCE6AA0A183 80 aa5.12□□□□□ -1.59
UBE3B-208ENST00000538070 HYDINQ4G0P3 5121 aa5.12□□□□□ -1.59
UBE3B-208ENST00000538070 RBM12B-AS1Q9P1G2 102 aa5.11□□□□□ -1.59
UBE3B-208ENST00000538070 PLA2G1BP04054 148 aaKnown RBP5.11□□□□□ -1.59
UBE3B-208ENST00000538070 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
UBE3B-208ENST00000538070 LRP1BQ9NZR2 4599 aa5.1□□□□□ -1.59
UBE3B-208ENST00000538070 A0A0A0MQY5 61 aa5.09□□□□□ -1.6
UBE3B-208ENST00000538070 A8MUN3 132 aa5.09□□□□□ -1.6
UBE3B-208ENST00000538070 KRTAP13-2Q52LG2 175 aa5.08□□□□□ -1.6
UBE3B-208ENST00000538070 Q5W150 140 aa5.08□□□□□ -1.6
UBE3B-208ENST00000538070 DNAH5Q8TE73 4624 aa5.07□□□□□ -1.6
UBE3B-208ENST00000538070 LINC00313P59037 77 aa5.07□□□□□ -1.6
UBE3B-208ENST00000538070 TP53AIP1Q9HCN2 124 aa5.07□□□□□ -1.6
UBE3B-208ENST00000538070 DMBT1Q9UGM3 2413 aaPredicted RBP5.07□□□□□ -1.6
UBE3B-208ENST00000538070 SSBP3-AS1Q7Z2R9 100 aa5.07□□□□□ -1.6
UBE3B-208ENST00000538070 TYMSOSQ8TAI1 123 aa5.07□□□□□ -1.6
UBE3B-208ENST00000538070 SPAG11AQ6PDA7 123 aa5.06□□□□□ -1.6
UBE3B-208ENST00000538070 COA5Q86WW8 74 aa5.06□□□□□ -1.6
UBE3B-208ENST00000538070 PRR15LQ9BU68 103 aa5.06□□□□□ -1.6
UBE3B-208ENST00000538070 FLG2Q5D862 2391 aaPredicted RBP5.05□□□□□ -1.6
UBE3B-208ENST00000538070 IGKV2D-30A0A075B6S6 120 aa5.05□□□□□ -1.6
UBE3B-208ENST00000538070 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
UBE3B-208ENST00000538070 Q8N9P0 234 aaPredicted RBP5.05□□□□□ -1.6
UBE3B-208ENST00000538070 H3BPC8 53 aa5.04□□□□□ -1.6
UBE3B-208ENST00000538070 CYP4F30PQ9H0H9 118 aa5.04□□□□□ -1.6
UBE3B-208ENST00000538070 CHKB-CPT1BH3BT56 60 aa5.03□□□□□ -1.6
UBE3B-208ENST00000538070 C8orf87E5RJ46 101 aa5.02□□□□□ -1.61
UBE3B-208ENST00000538070 PKHD1P08F94 4074 aa5.01□□□□□ -1.61
UBE3B-208ENST00000538070 VPS13BQ7Z7G8 4022 aa5.01□□□□□ -1.61
UBE3B-208ENST00000538070 ALMS1Q8TCU4 4167 aa5□□□□□ -1.61
UBE3B-208ENST00000538070 IGLV7-46A0A075B6I9 117 aa5□□□□□ -1.61
UBE3B-208ENST00000538070 C9orf92A6NGG3 77 aa5□□□□□ -1.61
UBE3B-208ENST00000538070 A8MU10 97 aa5□□□□□ -1.61
UBE3B-208ENST00000538070 SPANXA2-OT1Q8N9U9 137 aa5□□□□□ -1.61
UBE3B-208ENST00000538070 Q6ZSA8 131 aa4.99□□□□□ -1.61
UBE3B-208ENST00000538070 FAT1Q14517 4588 aa4.98□□□□□ -1.61
UBE3B-208ENST00000538070 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
UBE3B-208ENST00000538070 A6NED7 52 aa4.98□□□□□ -1.61
UBE3B-208ENST00000538070 HRES1P13985 223 aa4.97□□□□□ -1.61
UBE3B-208ENST00000538070 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
UBE3B-208ENST00000538070 LIMD2Q9BT23 127 aa4.97□□□□□ -1.61
UBE3B-208ENST00000538070 LOC101927531A0A1B0GV80 90 aa4.97□□□□□ -1.61
UBE3B-208ENST00000538070 SPINK1P00995 79 aa4.97□□□□□ -1.61
UBE3B-208ENST00000538070 Q1T7F1 81 aa4.97□□□□□ -1.61
UBE3B-208ENST00000538070 FAT2Q9NYQ8 4349 aa4.96□□□□□ -1.62
UBE3B-208ENST00000538070 LINC00304Q8N9R0 145 aa4.96□□□□□ -1.62
UBE3B-208ENST00000538070 PKD1P98161 4303 aa4.94□□□□□ -1.62
UBE3B-208ENST00000538070 FAM229AH3BQW9 127 aa4.94□□□□□ -1.62
UBE3B-208ENST00000538070 Q5VV11 94 aa4.93□□□□□ -1.62
UBE3B-208ENST00000538070 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
UBE3B-208ENST00000538070 Q8N1X5 172 aa4.92□□□□□ -1.62
UBE3B-208ENST00000538070 DYNC1H1Q14204 4646 aaKnown RBP4.91□□□□□ -1.62
UBE3B-208ENST00000538070 SACSQ9NZJ4 4579 aa4.91□□□□□ -1.62
UBE3B-208ENST00000538070 C7orf65Q6ZTY9 151 aa4.91□□□□□ -1.62
UBE3B-208ENST00000538070 ACYP2P14621 99 aa4.9□□□□□ -1.62
UBE3B-208ENST00000538070 KRTAP13-3Q3SY46 172 aa4.86□□□□□ -1.63
UBE3B-208ENST00000538070 KMT2CQ8NEZ4 4911 aaKnown RBP4.86□□□□□ -1.63
UBE3B-208ENST00000538070 SPINK7P58062 85 aa4.86□□□□□ -1.63
UBE3B-208ENST00000538070 KRTAP16-1A8MUX0 517 aa4.85□□□□□ -1.63
UBE3B-208ENST00000538070 LCA10Q71F78 164 aa4.83□□□□□ -1.64
UBE3B-208ENST00000538070 A0A1B0GU69 56 aa4.82□□□□□ -1.64
UBE3B-208ENST00000538070 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
UBE3B-208ENST00000538070 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
UBE3B-208ENST00000538070 DMAC1Q96GE9 116 aa4.81□□□□□ -1.64
UBE3B-208ENST00000538070 Q75L30 129 aa4.8□□□□□ -1.64
UBE3B-208ENST00000538070 APOBP04114 4563 aaKnown RBP4.8□□□□□ -1.64
UBE3B-208ENST00000538070 LRP1Q07954 4544 aaKnown RBP4.79□□□□□ -1.64
UBE3B-208ENST00000538070 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
UBE3B-208ENST00000538070 MYCBP2O75592 4640 aa4.77□□□□□ -1.65
UBE3B-208ENST00000538070 Q5VSD8 79 aa4.76□□□□□ -1.65
UBE3B-208ENST00000538070 LINC01554Q52M75 96 aa4.75□□□□□ -1.65
UBE3B-208ENST00000538070 RYR2Q92736 4967 aa4.74□□□□□ -1.65
UBE3B-208ENST00000538070 CDC42SE1Q9NRR8 79 aa4.74□□□□□ -1.65
UBE3B-208ENST00000538070 KRTAP10-4P60372 401 aaPredicted RBP4.71□□□□□ -1.66
UBE3B-208ENST00000538070 ATP11AUNQ6ZP68 121 aa4.7□□□□□ -1.66
UBE3B-208ENST00000538070 KIAA1109Q2LD37 5005 aa4.69□□□□□ -1.66
UBE3B-208ENST00000538070 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
UBE3B-208ENST00000538070 J3QL48 77 aa4.67□□□□□ -1.66
UBE3B-208ENST00000538070 UQCR11O14957 56 aa4.67□□□□□ -1.66
UBE3B-208ENST00000538070 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
UBE3B-208ENST00000538070 A8MUU9 505 aa4.66□□□□□ -1.66
UBE3B-208ENST00000538070 RPS29P62273 56 aaKnown RBP4.66□□□□□ -1.66
UBE3B-208ENST00000538070 RYR3Q15413 4870 aa4.66□□□□□ -1.66
UBE3B-208ENST00000538070 C20orf166-AS1Q96NR2 134 aa4.65□□□□□ -1.66
UBE3B-208ENST00000538070 FAT3Q8TDW7 4589 aa4.65□□□□□ -1.67
UBE3B-208ENST00000538070 ADM2Q7Z4H4 148 aa4.65□□□□□ -1.67
UBE3B-208ENST00000538070 BIRC6Q9NR09 4857 aa4.64□□□□□ -1.67
UBE3B-208ENST00000538070 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
UBE3B-208ENST00000538070 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms