RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 STARD9Q9P2P6 4700 aa7.26□□□□□ -1.25
CPSF7-218ENST00000537641 HRES1P13985 223 aa7.24□□□□□ -1.25
CPSF7-218ENST00000537641 KTN1-AS1Q86SY8 53 aa7.24□□□□□ -1.25
CPSF7-218ENST00000537641 IGLV5-52A0A0A0MRZ9 124 aa7.24□□□□□ -1.25
CPSF7-218ENST00000537641 MEGF8Q7Z7M0 2845 aa7.23□□□□□ -1.25
CPSF7-218ENST00000537641 SPAG11AQ6PDA7 123 aa7.22□□□□□ -1.25
CPSF7-218ENST00000537641 ZNF861PO60384 105 aa7.21□□□□□ -1.25
CPSF7-218ENST00000537641 SPTSSBQ8NFR3 76 aa7.21□□□□□ -1.25
CPSF7-218ENST00000537641 PSORS1C2Q9UIG4 136 aa7.21□□□□□ -1.25
CPSF7-218ENST00000537641 RTL8CO15255 209 aa7.21□□□□□ -1.26
CPSF7-218ENST00000537641 A6NN06 94 aa7.2□□□□□ -1.26
CPSF7-218ENST00000537641 KRTAP13-3Q3SY46 172 aa7.19□□□□□ -1.26
CPSF7-218ENST00000537641 C8orf87E5RJ46 101 aa7.18□□□□□ -1.26
CPSF7-218ENST00000537641 HECTD4Q9Y4D8 3996 aa7.18□□□□□ -1.26
CPSF7-218ENST00000537641 A0A087X002 238 aa7.18□□□□□ -1.26
CPSF7-218ENST00000537641 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
CPSF7-218ENST00000537641 C1orf134Q5TEV5 83 aa7.17□□□□□ -1.26
CPSF7-218ENST00000537641 SRRM2Q9UQ35 2752 aaKnown RBP7.17□□□□□ -1.26
CPSF7-218ENST00000537641 DNAH17Q9UFH2 4485 aa7.13□□□□□ -1.27
CPSF7-218ENST00000537641 ACYP2P14621 99 aa7.13□□□□□ -1.27
CPSF7-218ENST00000537641 SPINK7P58062 85 aa7.13□□□□□ -1.27
CPSF7-218ENST00000537641 Q5W150 140 aa7.13□□□□□ -1.27
CPSF7-218ENST00000537641 KMT2AQ03164 3969 aa7.13□□□□□ -1.27
CPSF7-218ENST00000537641 ANAPC11Q9NYG5 84 aa7.13□□□□□ -1.27
CPSF7-218ENST00000537641 SPINK6Q6UWN8 80 aa7.12□□□□□ -1.27
CPSF7-218ENST00000537641 DNAH2Q9P225 4427 aa7.12□□□□□ -1.27
CPSF7-218ENST00000537641 DNAH6Q9C0G6 4158 aa7.11□□□□□ -1.27
CPSF7-218ENST00000537641 LY6G6CO95867 125 aa7.11□□□□□ -1.27
CPSF7-218ENST00000537641 C7orf65Q6ZTY9 151 aa7.11□□□□□ -1.27
CPSF7-218ENST00000537641 SSBP3-AS1Q7Z2R9 100 aa7.11□□□□□ -1.27
CPSF7-218ENST00000537641 FBN3Q75N90 2809 aa7.11□□□□□ -1.27
CPSF7-218ENST00000537641 IGLV7-43P04211 117 aa7.1□□□□□ -1.27
CPSF7-218ENST00000537641 DMAC1Q96GE9 116 aa7.1□□□□□ -1.27
CPSF7-218ENST00000537641 PRR26Q8N8Z3 221 aa7.09□□□□□ -1.27
CPSF7-218ENST00000537641 DNAH8Q96JB1 4490 aa7.08□□□□□ -1.28
CPSF7-218ENST00000537641 DNHD1Q96M86 4753 aa7.08□□□□□ -1.28
CPSF7-218ENST00000537641 TGP01266 2768 aa7.08□□□□□ -1.28
CPSF7-218ENST00000537641 FAM229AH3BQW9 127 aa7.07□□□□□ -1.28
CPSF7-218ENST00000537641 CIRBP-AS1Q8TBR5 109 aa7.07□□□□□ -1.28
CPSF7-218ENST00000537641 RBM12B-AS1Q9P1G2 102 aa7.07□□□□□ -1.28
CPSF7-218ENST00000537641 ALMS1Q8TCU4 4167 aa7.05□□□□□ -1.28
CPSF7-218ENST00000537641 IGKV2-30P06310 120 aa7.03□□□□□ -1.28
CPSF7-218ENST00000537641 LINC00313P59037 77 aa7.03□□□□□ -1.28
CPSF7-218ENST00000537641 KRTAP21-3Q3LHN1 58 aa7.01□□□□□ -1.29
CPSF7-218ENST00000537641 FRAS1Q86XX4 4008 aa7□□□□□ -1.29
CPSF7-218ENST00000537641 KRTAP10-2P60368 255 aa6.99□□□□□ -1.29
CPSF7-218ENST00000537641 A0A1B0GU69 56 aa6.98□□□□□ -1.29
CPSF7-218ENST00000537641 KRTAP16-1A8MUX0 517 aa6.96□□□□□ -1.3
CPSF7-218ENST00000537641 Q6ZSA8 131 aa6.96□□□□□ -1.3
CPSF7-218ENST00000537641 SPATA8Q6RVD6 105 aa6.95□□□□□ -1.3
CPSF7-218ENST00000537641 DNAH11Q96DT5 4516 aa6.94□□□□□ -1.3
CPSF7-218ENST00000537641 DNAH5Q8TE73 4624 aa6.93□□□□□ -1.3
CPSF7-218ENST00000537641 KRTAP13-2Q52LG2 175 aa6.93□□□□□ -1.3
CPSF7-218ENST00000537641 KRTAP10-1P60331 282 aa6.92□□□□□ -1.3
CPSF7-218ENST00000537641 RETNLBQ9BQ08 111 aa6.91□□□□□ -1.3
CPSF7-218ENST00000537641 PKD1P98161 4303 aa6.91□□□□□ -1.3
CPSF7-218ENST00000537641 PLA2G1BP04054 148 aaKnown RBP6.9□□□□□ -1.31
CPSF7-218ENST00000537641 UQCR11O14957 56 aa6.89□□□□□ -1.31
CPSF7-218ENST00000537641 MIR22HGQ0VDD5 57 aa6.88□□□□□ -1.31
CPSF7-218ENST00000537641 IGKV2D-30A0A075B6S6 120 aa6.87□□□□□ -1.31
CPSF7-218ENST00000537641 FAT2Q9NYQ8 4349 aa6.87□□□□□ -1.31
CPSF7-218ENST00000537641 HYDINQ4G0P3 5121 aa6.84□□□□□ -1.31
CPSF7-218ENST00000537641 KRTAP1-4P0C5Y4 121 aa6.82□□□□□ -1.32
CPSF7-218ENST00000537641 PRAC1Q96KF2 57 aa6.79□□□□□ -1.32
CPSF7-218ENST00000537641 C4orf48Q5BLP8 95 aa6.79□□□□□ -1.32
CPSF7-218ENST00000537641 LRP1BQ9NZR2 4599 aa6.78□□□□□ -1.32
CPSF7-218ENST00000537641 SPINK1P00995 79 aa6.77□□□□□ -1.33
CPSF7-218ENST00000537641 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
CPSF7-218ENST00000537641 TYMSOSQ8TAI1 123 aa6.75□□□□□ -1.33
CPSF7-218ENST00000537641 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
CPSF7-218ENST00000537641 VPS13BQ7Z7G8 4022 aa6.74□□□□□ -1.33
CPSF7-218ENST00000537641 LINC01554Q52M75 96 aa6.71□□□□□ -1.34
CPSF7-218ENST00000537641 SACSQ9NZJ4 4579 aa6.69□□□□□ -1.34
CPSF7-218ENST00000537641 PKHD1P08F94 4074 aa6.68□□□□□ -1.34
CPSF7-218ENST00000537641 Q8N1X5 172 aa6.67□□□□□ -1.34
CPSF7-218ENST00000537641 A0A1B0GVY2 172 aa6.66□□□□□ -1.34
CPSF7-218ENST00000537641 LINC00304Q8N9R0 145 aa6.66□□□□□ -1.34
CPSF7-218ENST00000537641 A8MUU9 505 aa6.62□□□□□ -1.35
CPSF7-218ENST00000537641 C20orf166-AS1Q96NR2 134 aa6.62□□□□□ -1.35
CPSF7-218ENST00000537641 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
CPSF7-218ENST00000537641 SMR3BP02814 79 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-218ENST00000537641 H0YAA0 97 aa6.59□□□□□ -1.36
CPSF7-218ENST00000537641 DYNC1H1Q14204 4646 aaKnown RBP6.58□□□□□ -1.36
CPSF7-218ENST00000537641 KRTAP10-4P60372 401 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-218ENST00000537641 A0A1B0GU33 70 aa6.55□□□□□ -1.36
CPSF7-218ENST00000537641 H1FX-AS1Q4G0G2 97 aa6.55□□□□□ -1.36
CPSF7-218ENST00000537641 APOBP04114 4563 aaKnown RBP6.53□□□□□ -1.36
CPSF7-218ENST00000537641 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
CPSF7-218ENST00000537641 RYR2Q92736 4967 aa6.51□□□□□ -1.37
CPSF7-218ENST00000537641 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
CPSF7-218ENST00000537641 PKHD1L1Q86WI1 4243 aa6.5□□□□□ -1.37
CPSF7-218ENST00000537641 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
CPSF7-218ENST00000537641 COX6B2Q6YFQ2 88 aa6.46□□□□□ -1.38
CPSF7-218ENST00000537641 FAT1Q14517 4588 aa6.45□□□□□ -1.38
CPSF7-218ENST00000537641 K7ERS5 55 aa6.44□□□□□ -1.38
CPSF7-218ENST00000537641 KMT2CQ8NEZ4 4911 aaKnown RBP6.4□□□□□ -1.38
CPSF7-218ENST00000537641 FLG2Q5D862 2391 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-218ENST00000537641 Q5VSD8 79 aa6.33□□□□□ -1.4
CPSF7-218ENST00000537641 KRTAP10-8P60410 259 aa6.33□□□□□ -1.4
CPSF7-218ENST00000537641 ROMO1P60602 79 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms