RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 ADM2Q7Z4H4 148 aa9.39□□□□□ -0.91
CHFR-213ENST00000536843 MRPL34Q9BQ48 92 aaKnown RBP9.39□□□□□ -0.91
CHFR-213ENST00000536843 C14orf177Q52M58 125 aa9.38□□□□□ -0.91
CHFR-213ENST00000536843 CSMD3Q7Z407 3707 aa9.37□□□□□ -0.91
CHFR-213ENST00000536843 IGHV6-1A0A0B4J1U7 121 aa9.35□□□□□ -0.91
CHFR-213ENST00000536843 SRRM2Q9UQ35 2752 aaKnown RBP9.35□□□□□ -0.91
CHFR-213ENST00000536843 NBDYA0A0U1RRE5 68 aa9.35□□□□□ -0.91
CHFR-213ENST00000536843 RTL8CO15255 209 aa9.35□□□□□ -0.91
CHFR-213ENST00000536843 ACYP2P14621 99 aa9.33□□□□□ -0.92
CHFR-213ENST00000536843 ALMS1Q8TCU4 4167 aa9.33□□□□□ -0.92
CHFR-213ENST00000536843 SPATA8Q6RVD6 105 aa9.32□□□□□ -0.92
CHFR-213ENST00000536843 NUPR2A6NF83 97 aa9.32□□□□□ -0.92
CHFR-213ENST00000536843 PRKDCP78527 4128 aaKnown RBP9.31□□□□□ -0.92
CHFR-213ENST00000536843 KRTAP13-1Q8IUC0 172 aa9.31□□□□□ -0.92
CHFR-213ENST00000536843 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
CHFR-213ENST00000536843 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
CHFR-213ENST00000536843 CDK2AP2O75956 126 aa9.29□□□□□ -0.92
CHFR-213ENST00000536843 PANO1I0J062 215 aa9.29□□□□□ -0.92
CHFR-213ENST00000536843 H3BS24 57 aa9.27□□□□□ -0.92
CHFR-213ENST00000536843 IGLV9-49A0A0B4J1Y8 123 aa9.26□□□□□ -0.93
CHFR-213ENST00000536843 NOTCH2NLQ7Z3S9 236 aa9.26□□□□□ -0.93
CHFR-213ENST00000536843 VPS13DQ5THJ4 4388 aa9.26□□□□□ -0.93
CHFR-213ENST00000536843 STARD9Q9P2P6 4700 aa9.26□□□□□ -0.93
CHFR-213ENST00000536843 A0A1B0GU69 56 aa9.25□□□□□ -0.93
CHFR-213ENST00000536843 Q5W150 140 aa9.25□□□□□ -0.93
CHFR-213ENST00000536843 DMAC1Q96GE9 116 aa9.25□□□□□ -0.93
CHFR-213ENST00000536843 LINC00483Q53H64 154 aa9.23□□□□□ -0.93
CHFR-213ENST00000536843 FBN3Q75N90 2809 aa9.22□□□□□ -0.93
CHFR-213ENST00000536843 MIR22HGQ0VDD5 57 aa9.2□□□□□ -0.94
CHFR-213ENST00000536843 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
CHFR-213ENST00000536843 UQCR11O14957 56 aa9.19□□□□□ -0.94
CHFR-213ENST00000536843 A0A087WTM6 91 aa9.17□□□□□ -0.94
CHFR-213ENST00000536843 SPACA4Q8TDM5 124 aa9.17□□□□□ -0.94
CHFR-213ENST00000536843 WWC2-AS2Q96NR7 200 aa9.15□□□□□ -0.94
CHFR-213ENST00000536843 RETNLBQ9BQ08 111 aa9.14□□□□□ -0.95
CHFR-213ENST00000536843 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
CHFR-213ENST00000536843 DNAH2Q9P225 4427 aa9.13□□□□□ -0.95
CHFR-213ENST00000536843 HECTD4Q9Y4D8 3996 aa9.12□□□□□ -0.95
CHFR-213ENST00000536843 ZNF706Q9Y5V0 76 aaPredicted RBP9.12□□□□□ -0.95
CHFR-213ENST00000536843 DNAH17Q9UFH2 4485 aa9.11□□□□□ -0.95
CHFR-213ENST00000536843 KMT2AQ03164 3969 aa9.1□□□□□ -0.95
CHFR-213ENST00000536843 TGP01266 2768 aa9.07□□□□□ -0.96
CHFR-213ENST00000536843 PSORS1C2Q9UIG4 136 aa9.05□□□□□ -0.96
CHFR-213ENST00000536843 SPINK6Q6UWN8 80 aa9.04□□□□□ -0.96
CHFR-213ENST00000536843 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
CHFR-213ENST00000536843 ZNF861PO60384 105 aa9.03□□□□□ -0.96
CHFR-213ENST00000536843 IGKV2-30P06310 120 aa9.03□□□□□ -0.96
CHFR-213ENST00000536843 DNAH8Q96JB1 4490 aa9.02□□□□□ -0.97
CHFR-213ENST00000536843 IGLV5-52A0A0A0MRZ9 124 aa9.02□□□□□ -0.97
CHFR-213ENST00000536843 C1orf134Q5TEV5 83 aa9.01□□□□□ -0.97
CHFR-213ENST00000536843 ANAPC11Q9NYG5 84 aa8.99□□□□□ -0.97
CHFR-213ENST00000536843 LY6G6CO95867 125 aa8.99□□□□□ -0.97
CHFR-213ENST00000536843 IGLV7-43P04211 117 aa8.97□□□□□ -0.97
CHFR-213ENST00000536843 FRAS1Q86XX4 4008 aa8.96□□□□□ -0.98
CHFR-213ENST00000536843 DNAH5Q8TE73 4624 aa8.9□□□□□ -0.98
CHFR-213ENST00000536843 DNAH6Q9C0G6 4158 aa8.89□□□□□ -0.99
CHFR-213ENST00000536843 DNAH11Q96DT5 4516 aa8.88□□□□□ -0.99
CHFR-213ENST00000536843 KRTAP10-2P60368 255 aa8.88□□□□□ -0.99
CHFR-213ENST00000536843 CIRBP-AS1Q8TBR5 109 aa8.87□□□□□ -0.99
CHFR-213ENST00000536843 IGKV2D-30A0A075B6S6 120 aa8.85□□□□□ -0.99
CHFR-213ENST00000536843 KRTAP25-1Q3LHN0 102 aa8.85□□□□□ -0.99
CHFR-213ENST00000536843 A8MUU9 505 aa8.83□□□□□ -1
CHFR-213ENST00000536843 KRTAP16-1A8MUX0 517 aa8.82□□□□□ -1
CHFR-213ENST00000536843 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
CHFR-213ENST00000536843 ROMO1P60602 79 aa8.81□□□□□ -1
CHFR-213ENST00000536843 KRTAP10-1P60331 282 aa8.76□□□□□ -1.01
CHFR-213ENST00000536843 H0YAA0 97 aa8.76□□□□□ -1.01
CHFR-213ENST00000536843 LINC00304Q8N9R0 145 aa8.75□□□□□ -1.01
CHFR-213ENST00000536843 HYDINQ4G0P3 5121 aa8.75□□□□□ -1.01
CHFR-213ENST00000536843 PKD1P98161 4303 aa8.74□□□□□ -1.01
CHFR-213ENST00000536843 Q6ZSA8 131 aa8.74□□□□□ -1.01
CHFR-213ENST00000536843 LRP1BQ9NZR2 4599 aa8.74□□□□□ -1.01
CHFR-213ENST00000536843 FAT2Q9NYQ8 4349 aa8.74□□□□□ -1.01
CHFR-213ENST00000536843 SPINK1P00995 79 aa8.71□□□□□ -1.01
CHFR-213ENST00000536843 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
CHFR-213ENST00000536843 SACSQ9NZJ4 4579 aa8.65□□□□□ -1.02
CHFR-213ENST00000536843 Q8N1X5 172 aa8.63□□□□□ -1.03
CHFR-213ENST00000536843 A0A1B0GU33 70 aa8.61□□□□□ -1.03
CHFR-213ENST00000536843 TYMSOSQ8TAI1 123 aa8.6□□□□□ -1.03
CHFR-213ENST00000536843 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.03
CHFR-213ENST00000536843 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
CHFR-213ENST00000536843 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
CHFR-213ENST00000536843 P0C880 135 aa8.55□□□□□ -1.04
CHFR-213ENST00000536843 A0A1B0GVY2 172 aa8.5□□□□□ -1.05
CHFR-213ENST00000536843 RYR2Q92736 4967 aa8.49□□□□□ -1.05
CHFR-213ENST00000536843 K7ERS5 55 aa8.49□□□□□ -1.05
CHFR-213ENST00000536843 PKHD1P08F94 4074 aa8.47□□□□□ -1.05
CHFR-213ENST00000536843 CRIPTQ9P021 101 aa8.46□□□□□ -1.05
CHFR-213ENST00000536843 KMT2CQ8NEZ4 4911 aaKnown RBP8.46□□□□□ -1.05
CHFR-213ENST00000536843 DYNC1H1Q14204 4646 aaKnown RBP8.46□□□□□ -1.05
CHFR-213ENST00000536843 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
CHFR-213ENST00000536843 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.06
CHFR-213ENST00000536843 FLG2Q5D862 2391 aaPredicted RBP8.37□□□□□ -1.07
CHFR-213ENST00000536843 COX6B2Q6YFQ2 88 aa8.37□□□□□ -1.07
CHFR-213ENST00000536843 FAT1Q14517 4588 aa8.34□□□□□ -1.07
CHFR-213ENST00000536843 APOBP04114 4563 aaKnown RBP8.33□□□□□ -1.08
CHFR-213ENST00000536843 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
CHFR-213ENST00000536843 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
CHFR-213ENST00000536843 RPS29P62273 56 aaKnown RBP8.28□□□□□ -1.08
CHFR-213ENST00000536843 RYR3Q15413 4870 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms