RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ATXN8Q156A1 80 aa2.72□□□□□ -1.97
CLIP1-207ENST00000536634 FAM229BQ4G0N7 80 aa2.72□□□□□ -1.97
CLIP1-207ENST00000536634 CNFNQ9BYD5 112 aa2.72□□□□□ -1.97
CLIP1-207ENST00000536634 UBE2D4Q9Y2X8 147 aa2.72□□□□□ -1.97
CLIP1-207ENST00000536634 IGHV3OR16-9A0A0B4J2B5 98 aa2.71□□□□□ -1.98
CLIP1-207ENST00000536634 A0A0B4J2C4 111 aa2.71□□□□□ -1.98
CLIP1-207ENST00000536634 TRBV6-5A0A0K0K1A5 114 aa2.71□□□□□ -1.98
CLIP1-207ENST00000536634 HIGD1CA8MV81 97 aa2.71□□□□□ -1.98
CLIP1-207ENST00000536634 ORMDL2Q53FV1 153 aa2.71□□□□□ -1.98
CLIP1-207ENST00000536634 C2orf82Q6UX34 121 aa2.71□□□□□ -1.98
CLIP1-207ENST00000536634 Q8N8P6 123 aa2.71□□□□□ -1.98
CLIP1-207ENST00000536634 TTTY13Q9BZ97 58 aa2.71□□□□□ -1.98
CLIP1-207ENST00000536634 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CLIP1-207ENST00000536634 C8orf87E5RJ46 101 aa2.7□□□□□ -1.98
CLIP1-207ENST00000536634 K7EMI3 77 aa2.7□□□□□ -1.98
CLIP1-207ENST00000536634 M0R2T5 61 aa2.7□□□□□ -1.98
CLIP1-207ENST00000536634 POLR2KP53803 58 aaKnown RBP2.7□□□□□ -1.98
CLIP1-207ENST00000536634 Q6JHZ5 121 aa2.7□□□□□ -1.98
CLIP1-207ENST00000536634 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
CLIP1-207ENST00000536634 DAND5Q8N907 189 aa2.7□□□□□ -1.98
CLIP1-207ENST00000536634 SMCR5Q8TEV8 140 aa2.7□□□□□ -1.98
CLIP1-207ENST00000536634 XAGE1AQ9HD64 81 aa2.7□□□□□ -1.98
CLIP1-207ENST00000536634 PRO1854Q9UHT4 67 aa2.7□□□□□ -1.98
CLIP1-207ENST00000536634 TRBV30A0A0K0K1B3 111 aa2.69□□□□□ -1.98
CLIP1-207ENST00000536634 TRBV27A0A0K0K1C4 114 aa2.69□□□□□ -1.98
CLIP1-207ENST00000536634 SMKR1H3BMG3 65 aa2.69□□□□□ -1.98
CLIP1-207ENST00000536634 H7BZZ5 65 aa2.69□□□□□ -1.98
CLIP1-207ENST00000536634 ZNF22P17026 224 aaPredicted RBP2.69□□□□□ -1.98
CLIP1-207ENST00000536634 PLNP26678 52 aa2.69□□□□□ -1.98
CLIP1-207ENST00000536634 FCER1GP30273 86 aa2.69□□□□□ -1.98
CLIP1-207ENST00000536634 IFI27P40305 119 aaPredicted RBP2.69□□□□□ -1.98
CLIP1-207ENST00000536634 UBE2AP49459 152 aa2.69□□□□□ -1.98
CLIP1-207ENST00000536634 NDUFC1O43677 76 aa2.68□□□□□ -1.98
CLIP1-207ENST00000536634 NDUFS5O43920 106 aa2.68□□□□□ -1.98
CLIP1-207ENST00000536634 TIMM17BO60830 172 aa2.68□□□□□ -1.98
CLIP1-207ENST00000536634 CCKP06307 115 aa2.68□□□□□ -1.98
CLIP1-207ENST00000536634 LGALS3P17931 250 aaKnown RBP2.68□□□□□ -1.98
CLIP1-207ENST00000536634 RPL39P62891 51 aaKnown RBP2.68□□□□□ -1.98
CLIP1-207ENST00000536634 PRLHP81277 87 aa2.68□□□□□ -1.98
CLIP1-207ENST00000536634 KLKP1Q107X0 134 aa2.68□□□□□ -1.98
CLIP1-207ENST00000536634 TRAV12-1A0A0B4J245 112 aa2.67□□□□□ -1.98
CLIP1-207ENST00000536634 M0R378 163 aa2.67□□□□□ -1.98
CLIP1-207ENST00000536634 PCOTHQ58A44 107 aa2.67□□□□□ -1.98
CLIP1-207ENST00000536634 SCGB1D4Q6XE38 83 aa2.67□□□□□ -1.98
CLIP1-207ENST00000536634 TRAV13-2A0A0B4J235 113 aa2.66□□□□□ -1.98
CLIP1-207ENST00000536634 A0A1B0GUT8 65 aa2.66□□□□□ -1.98
CLIP1-207ENST00000536634 TMEM223A0PJW6 202 aa2.66□□□□□ -1.98
CLIP1-207ENST00000536634 LST1O00453 97 aa2.66□□□□□ -1.98
CLIP1-207ENST00000536634 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
CLIP1-207ENST00000536634 SPAG11AQ6PDA7 123 aa2.66□□□□□ -1.98
CLIP1-207ENST00000536634 SFTA2Q6UW10 78 aa2.66□□□□□ -1.98
CLIP1-207ENST00000536634 ORMDL3Q8N138 153 aa2.66□□□□□ -1.98
CLIP1-207ENST00000536634 TIMM21Q9BVV7 248 aa2.66□□□□□ -1.98
CLIP1-207ENST00000536634 F8VRH5 84 aa2.65□□□□□ -1.99
CLIP1-207ENST00000536634 ZNF73O43830 326 aaPredicted RBP2.65□□□□□ -1.99
CLIP1-207ENST00000536634 Q5W150 140 aa2.65□□□□□ -1.99
CLIP1-207ENST00000536634 TRAV7A0A075B6U4 112 aa2.64□□□□□ -1.99
CLIP1-207ENST00000536634 TRBV10-3A0A0K0K1G6 114 aa2.64□□□□□ -1.99
CLIP1-207ENST00000536634 ZNF815PA8K554 130 aa2.64□□□□□ -1.99
CLIP1-207ENST00000536634 Q1T7F1 81 aa2.64□□□□□ -1.99
CLIP1-207ENST00000536634 ATP5EP2Q5VTU8 51 aa2.64□□□□□ -1.99
CLIP1-207ENST00000536634 NEBP20929 6669 aa2.64□□□□□ -1.99
CLIP1-207ENST00000536634 D6R8Y8 96 aa2.63□□□□□ -1.99
CLIP1-207ENST00000536634 COX6CP09669 75 aa2.63□□□□□ -1.99
CLIP1-207ENST00000536634 CKS2P33552 79 aa2.63□□□□□ -1.99
CLIP1-207ENST00000536634 RBM3P98179 157 aaKnown RBP2.63□□□□□ -1.99
CLIP1-207ENST00000536634 LCA10Q71F78 164 aa2.63□□□□□ -1.99
CLIP1-207ENST00000536634 C20orf197Q8N268 126 aa2.63□□□□□ -1.99
CLIP1-207ENST00000536634 SPRR4Q96PI1 79 aa2.63□□□□□ -1.99
CLIP1-207ENST00000536634 TOMM7Q9P0U1 55 aa2.63□□□□□ -1.99
CLIP1-207ENST00000536634 MUC12Q9UKN1 5478 aa2.63□□□□□ -1.99
CLIP1-207ENST00000536634 LOC389332A0A1B0GUA5 103 aa2.62□□□□□ -1.99
CLIP1-207ENST00000536634 TMEM256-PLSCR3K7ERE1 68 aa2.62□□□□□ -1.99
CLIP1-207ENST00000536634 SPINK1P00995 79 aa2.62□□□□□ -1.99
CLIP1-207ENST00000536634 MRPL51Q4U2R6 128 aaKnown RBP2.62□□□□□ -1.99
CLIP1-207ENST00000536634 COX6B2Q6YFQ2 88 aa2.62□□□□□ -1.99
CLIP1-207ENST00000536634 Q8IZM0 81 aa2.62□□□□□ -1.99
CLIP1-207ENST00000536634 NDUFA12Q9UI09 145 aa2.62□□□□□ -1.99
CLIP1-207ENST00000536634 S100A7L2Q5SY68 101 aa2.61□□□□□ -1.99
CLIP1-207ENST00000536634 TIMM17AQ99595 171 aa2.61□□□□□ -1.99
CLIP1-207ENST00000536634 HIGD2AQ9BW72 106 aa2.61□□□□□ -1.99
CLIP1-207ENST00000536634 A0A1B0GVX0 72 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 C9orf92A6NGG3 77 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 A6NN06 94 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 A8MUN3 132 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 F8WEM9 126 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 ERC2-IT1O76042 136 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 C7orf65Q6ZTY9 151 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 Q8NDZ9 215 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 TOMM6Q96B49 74 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 AMELXQ99217 191 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 SMIM2Q9BVW6 85 aa2.6□□□□□ -1.99
CLIP1-207ENST00000536634 A0A087WVE0 104 aa2.59□□□□□ -1.99
CLIP1-207ENST00000536634 IGIPA6NJ69 53 aa2.59□□□□□ -1.99
CLIP1-207ENST00000536634 PPP1R17O96001 155 aa2.59□□□□□ -1.99
CLIP1-207ENST00000536634 RPS29P62273 56 aaKnown RBP2.59□□□□□ -1.99
CLIP1-207ENST00000536634 ATP11AUNQ6ZP68 121 aa2.59□□□□□ -1.99
CLIP1-207ENST00000536634 TMEM141Q96I45 108 aa2.59□□□□□ -1.99
CLIP1-207ENST00000536634 OBSCN-AS1Q96MR7 158 aa2.59□□□□□ -1.99
CLIP1-207ENST00000536634 CDKN2A-AS1Q9UH64 79 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms